RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 MNS1Q8NEH6 495 aa13.93□□□□□ -0.18
SEC16A-206ENST00000431893 MYBBP1AQ9BQG0 1328 aaKnown RBP13.93□□□□□ -0.18
SEC16A-206ENST00000431893 FYB1O15117 783 aa13.93□□□□□ -0.18
SEC16A-206ENST00000431893 IPO7O95373 1038 aaKnown RBP13.93□□□□□ -0.18
SEC16A-206ENST00000431893 LMOD3Q0VAK6 560 aa13.93□□□□□ -0.18
SEC16A-206ENST00000431893 CCDC27Q2M243 656 aa13.93□□□□□ -0.18
SEC16A-206ENST00000431893 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.93□□□□□ -0.18
SEC16A-206ENST00000431893 PLCD4Q9BRC7 762 aa13.93□□□□□ -0.18
SEC16A-206ENST00000431893 CUX2O14529 1486 aa13.93□□□□□ -0.18
SEC16A-206ENST00000431893 KIF15Q9NS87 1388 aa13.92□□□□□ -0.18
SEC16A-206ENST00000431893 CPLX1O14810 134 aa13.92□□□□□ -0.18
SEC16A-206ENST00000431893 MAP7D2Q96T17 732 aa13.92□□□□□ -0.18
SEC16A-206ENST00000431893 CARMIL1Q5VZK9 1371 aa13.92□□□□□ -0.18
SEC16A-206ENST00000431893 KIF3BO15066 747 aa13.91□□□□□ -0.18
SEC16A-206ENST00000431893 AK7Q96M32 723 aa13.91□□□□□ -0.18
SEC16A-206ENST00000431893 TRIM34Q9BYJ4 488 aa13.91□□□□□ -0.18
SEC16A-206ENST00000431893 C9orf78Q9NZ63 289 aaPredicted RBP13.91□□□□□ -0.18
SEC16A-206ENST00000431893 IFIT2P09913 472 aaKnown RBP13.9□□□□□ -0.18
SEC16A-206ENST00000431893 PDE3BQ13370 1112 aa13.9□□□□□ -0.18
SEC16A-206ENST00000431893 ST20-MTHFSA0A0A6YYL1 179 aa13.9□□□□□ -0.18
SEC16A-206ENST00000431893 MPNDQ8N594 471 aa13.9□□□□□ -0.18
SEC16A-206ENST00000431893 BRPF3Q9ULD4 1205 aa13.9□□□□□ -0.18
SEC16A-206ENST00000431893 CNKSR2Q8WXI2 1034 aa13.9□□□□□ -0.18
SEC16A-206ENST00000431893 HDAC5Q9UQL6 1122 aa13.9□□□□□ -0.18
SEC16A-206ENST00000431893 APAF1O14727 1248 aa13.9□□□□□ -0.18
SEC16A-206ENST00000431893 SMC3Q9UQE7 1217 aa13.9□□□□□ -0.18
SEC16A-206ENST00000431893 C1orf141Q5JVX7 400 aa13.89□□□□□ -0.19
SEC16A-206ENST00000431893 MAPK8IP2Q13387 824 aaPredicted RBP13.89□□□□□ -0.19
SEC16A-206ENST00000431893 CAGE1Q8TC20 777 aa13.89□□□□□ -0.19
SEC16A-206ENST00000431893 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.89□□□□□ -0.191e-6■■■■■ 55.4
SEC16A-206ENST00000431893 CTDP1Q9Y5B0 961 aaPredicted RBP13.89□□□□□ -0.19
SEC16A-206ENST00000431893 ANKRD20A12PQ8NF67 263 aa13.89□□□□□ -0.19
SEC16A-206ENST00000431893 LNPKQ9C0E8 428 aa13.89□□□□□ -0.19
SEC16A-206ENST00000431893 CHMP5Q9NZZ3 219 aa13.89□□□□□ -0.19
SEC16A-206ENST00000431893 NFKBIBQ15653 356 aa13.89□□□□□ -0.19
SEC16A-206ENST00000431893 ABCC8Q09428 1581 aa13.89□□□□□ -0.19
SEC16A-206ENST00000431893 RB1CC1Q8TDY2 1594 aa13.88□□□□□ -0.19
SEC16A-206ENST00000431893 ZKSCAN1P17029 563 aaPredicted RBP13.88□□□□□ -0.19
SEC16A-206ENST00000431893 ZFYVE27Q5T4F4 411 aa13.87□□□□□ -0.19
SEC16A-206ENST00000431893 ZNF428Q96B54 188 aa13.87□□□□□ -0.19
SEC16A-206ENST00000431893 IL27Q8NEV9 243 aa13.87□□□□□ -0.19
SEC16A-206ENST00000431893 CT47A1Q5JQC4 288 aaPredicted RBP13.87□□□□□ -0.19
SEC16A-206ENST00000431893 E9PSI1 815 aa13.87□□□□□ -0.19
SEC16A-206ENST00000431893 NOM1Q5C9Z4 860 aaKnown RBP13.86□□□□□ -0.19
SEC16A-206ENST00000431893 NASPP49321 788 aaPredicted RBP13.86□□□□□ -0.19
SEC16A-206ENST00000431893 HSP90AB2PQ58FF8 381 aa13.86□□□□□ -0.19
SEC16A-206ENST00000431893 SYTL4Q96C24 671 aaPredicted RBP13.86□□□□□ -0.19
SEC16A-206ENST00000431893 SPC24Q8NBT2 197 aa13.86□□□□□ -0.19
SEC16A-206ENST00000431893 CCDC47Q96A33 483 aaKnown RBP13.86□□□□□ -0.19
SEC16A-206ENST00000431893 REC8O95072 547 aa13.86□□□□□ -0.19
SEC16A-206ENST00000431893 H0YHG0 523 aa13.85□□□□□ -0.19
SEC16A-206ENST00000431893 RUFY2Q8WXA3 655 aa13.85□□□□□ -0.19
SEC16A-206ENST00000431893 NOL10Q9BSC4 688 aaKnown RBP13.85□□□□□ -0.19
SEC16A-206ENST00000431893 VPS37DQ86XT2 251 aa13.85□□□□□ -0.19
SEC16A-206ENST00000431893 ARGLU1Q9NWB6 273 aaPredicted RBP13.85□□□□□ -0.19
SEC16A-206ENST00000431893 PANK1Q8TE04 598 aa13.85□□□□□ -0.19
SEC16A-206ENST00000431893 CGNL1Q0VF96 1302 aa13.85□□□□□ -0.19
SEC16A-206ENST00000431893 CAVIN1Q6NZI2 390 aaKnown RBP13.84□□□□□ -0.19
SEC16A-206ENST00000431893 AMOTL1Q8IY63 956 aa13.84□□□□□ -0.19
SEC16A-206ENST00000431893 STK11IPQ8N1F8 1099 aa13.84□□□□□ -0.19
SEC16A-206ENST00000431893 VPS8Q8N3P4 1428 aa13.84□□□□□ -0.19
SEC16A-206ENST00000431893 ANKRD30AQ9BXX3 1397 aa13.84□□□□□ -0.19
SEC16A-206ENST00000431893 C22orf23Q9BZE7 217 aa13.84□□□□□ -0.19
SEC16A-206ENST00000431893 FANCIQ9NVI1 1328 aa13.84□□□□□ -0.19
SEC16A-206ENST00000431893 KRI1Q8N9T8 703 aaKnown RBP13.84□□□□□ -0.19
SEC16A-206ENST00000431893 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.84□□□□□ -0.19
SEC16A-206ENST00000431893 HOOK1Q9UJC3 728 aaKnown RBP13.84□□□□□ -0.19
SEC16A-206ENST00000431893 SMC2O95347 1197 aa13.84□□□□□ -0.19
SEC16A-206ENST00000431893 BRPF1P55201 1214 aaPredicted RBP13.84□□□□□ -0.19
SEC16A-206ENST00000431893 EVA1CP58658 441 aa13.84□□□□□ -0.19
SEC16A-206ENST00000431893 HSP90B2PQ58FF3 399 aa13.84□□□□□ -0.19
SEC16A-206ENST00000431893 CPLX2Q6PUV4 134 aaKnown RBP13.84□□□□□ -0.19
SEC16A-206ENST00000431893 MINK1Q8N4C8 1332 aaPredicted RBP13.83□□□□□ -0.19
SEC16A-206ENST00000431893 CEBPZQ03701 1054 aaKnown RBP13.83□□□□□ -0.2
SEC16A-206ENST00000431893 COG3Q96JB2 828 aa13.83□□□□□ -0.2
SEC16A-206ENST00000431893 CHMP4AQ9BY43 222 aa13.83□□□□□ -0.2
SEC16A-206ENST00000431893 RIPK4P57078 832 aa13.83□□□□□ -0.2
SEC16A-206ENST00000431893 ODF2Q5BJF6 829 aa13.83□□□□□ -0.2
SEC16A-206ENST00000431893 DZIP1LQ8IYY4 767 aaKnown RBP13.83□□□□□ -0.2
SEC16A-206ENST00000431893 FMNL2Q96PY5 1086 aa13.83□□□□□ -0.2
SEC16A-206ENST00000431893 CCDC73Q6ZRK6 1079 aa13.83□□□□□ -0.2
SEC16A-206ENST00000431893 CCDC43Q96MW1 224 aaKnown RBP13.83□□□□□ -0.2
SEC16A-206ENST00000431893 CCDC39Q9UFE4 941 aa13.83□□□□□ -0.2
SEC16A-206ENST00000431893 EPS15P42566 896 aa13.83□□□□□ -0.2
SEC16A-206ENST00000431893 TEFQ10587 303 aa13.83□□□□□ -0.2
SEC16A-206ENST00000431893 TRDNQ13061 729 aa13.83□□□□□ -0.2
SEC16A-206ENST00000431893 HSP90AB3PQ58FF7 597 aa13.82□□□□□ -0.2
SEC16A-206ENST00000431893 ERICH2A1L162 156 aa13.82□□□□□ -0.2
SEC16A-206ENST00000431893 FKBP5Q13451 457 aaPredicted RBP13.82□□□□□ -0.2
SEC16A-206ENST00000431893 TTC5Q8N0Z6 440 aa13.82□□□□□ -0.2
SEC16A-206ENST00000431893 PHLDB1Q86UU1 1377 aa13.82□□□□□ -0.2
SEC16A-206ENST00000431893 AIMP1Q12904 312 aaKnown RBP13.82□□□□□ -0.2
SEC16A-206ENST00000431893 FMN1Q68DA7 1419 aa13.82□□□□□ -0.2
SEC16A-206ENST00000431893 INTS3Q68E01 1043 aaKnown RBP13.82□□□□□ -0.2
SEC16A-206ENST00000431893 WASHC2CQ9Y4E1 1318 aa13.82□□□□□ -0.2
SEC16A-206ENST00000431893 HMOX1P09601 288 aa13.81□□□□□ -0.2
SEC16A-206ENST00000431893 NEXNQ0ZGT2 675 aa13.81□□□□□ -0.2
SEC16A-206ENST00000431893 NEUROD6Q96NK8 337 aa13.81□□□□□ -0.2
SEC16A-206ENST00000431893 DDX19BQ9UMR2 479 aa13.81□□□□□ -0.2
SEC16A-206ENST00000431893 ATP2B1P20020 1258 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms