RNA–Protein interactions for RNA: ENST00000430407.1

RCC1-209, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-209ENST00000430407 ADGRB3O60242 1522 aa26.8■■□□□ 1.88
RCC1-209ENST00000430407 PPP1R15AO75807 674 aaPredicted RBP26.79■■□□□ 1.88
RCC1-209ENST00000430407 FAM135BQ49AJ0 1406 aa26.73■■□□□ 1.87
RCC1-209ENST00000430407 TET3O43151 1660 aa26.73■■□□□ 1.87
RCC1-209ENST00000430407 CHGAP10645 457 aaKnown RBP26.73■■□□□ 1.87
RCC1-209ENST00000430407 RBM33Q96EV2 1170 aaKnown RBP26.72■■□□□ 1.87
RCC1-209ENST00000430407 UNC13BO14795 1591 aa26.71■■□□□ 1.87
RCC1-209ENST00000430407 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.7■■□□□ 1.86
RCC1-209ENST00000430407 MSH6P52701 1360 aa26.69■■□□□ 1.86
RCC1-209ENST00000430407 PLEKHG1Q9ULL1 1385 aa26.69■■□□□ 1.86
RCC1-209ENST00000430407 NKTRP30414 1462 aaKnown RBP26.68■■□□□ 1.86
RCC1-209ENST00000430407 RIMS2Q9UQ26 1411 aa26.68■■□□□ 1.86
RCC1-209ENST00000430407 XIRP1Q702N8 1843 aaKnown RBP26.68■■□□□ 1.86
RCC1-209ENST00000430407 NUP155O75694 1391 aa26.66■■□□□ 1.86
RCC1-209ENST00000430407 ZFYVE9O95405 1425 aa26.65■■□□□ 1.86
RCC1-209ENST00000430407 TBX22Q9Y458 520 aa26.63■■□□□ 1.85
RCC1-209ENST00000430407 NWD1Q149M9 1564 aa26.63■■□□□ 1.85
RCC1-209ENST00000430407 GCC2Q8IWJ2 1684 aa26.61■■□□□ 1.85
RCC1-209ENST00000430407 C14orf37Q86TY3 774 aa26.61■■□□□ 1.85
RCC1-209ENST00000430407 SLAIN2Q9P270 581 aa26.61■■□□□ 1.85
RCC1-209ENST00000430407 IQGAP3Q86VI3 1631 aa26.61■■□□□ 1.85
RCC1-209ENST00000430407 NAIPQ13075 1403 aa26.6■■□□□ 1.85
RCC1-209ENST00000430407 NUTM2DQ5VT03 806 aaPredicted RBP26.59■■□□□ 1.85
RCC1-209ENST00000430407 TMEM131LA2VDJ0 1609 aa26.58■■□□□ 1.85
RCC1-209ENST00000430407 ROBO1Q9Y6N7 1651 aa26.57■■□□□ 1.84
RCC1-209ENST00000430407 HFM1A2PYH4 1435 aa26.55■■□□□ 1.84
RCC1-209ENST00000430407 RGS17Q9UGC6 210 aaPredicted RBP26.54■■□□□ 1.84
RCC1-209ENST00000430407 NCOA3Q9Y6Q9 1424 aa26.53■■□□□ 1.84
RCC1-209ENST00000430407 E9PCH4 1651 aa26.53■■□□□ 1.84
RCC1-209ENST00000430407 MYO5BQ9ULV0 1848 aa26.51■■□□□ 1.83
RCC1-209ENST00000430407 PIK3R4Q99570 1358 aa26.5■■□□□ 1.83
RCC1-209ENST00000430407 ATF3P18847 181 aa26.49■■□□□ 1.83
RCC1-209ENST00000430407 CADPS2Q86UW7 1296 aa26.49■■□□□ 1.83
RCC1-209ENST00000430407 CHD2O14647 1828 aaKnown RBP26.49■■□□□ 1.83
RCC1-209ENST00000430407 ADAMTS13Q76LX8 1427 aa26.48■■□□□ 1.83
RCC1-209ENST00000430407 C19orf44Q9H6X5 657 aa26.48■■□□□ 1.83
RCC1-209ENST00000430407 JCADQ9P266 1359 aa26.47■■□□□ 1.83
RCC1-209ENST00000430407 DIP2AQ14689 1571 aa26.47■■□□□ 1.83
RCC1-209ENST00000430407 ZNF326Q5BKZ1 582 aaKnown RBP26.47■■□□□ 1.83
RCC1-209ENST00000430407 AMOTL2Q9Y2J4 779 aa26.46■■□□□ 1.83
RCC1-209ENST00000430407 TRIM52Q96A61 297 aa26.45■■□□□ 1.82
RCC1-209ENST00000430407 POTEAQ6S8J7 498 aa26.43■■□□□ 1.82
RCC1-209ENST00000430407 TRPM2O94759 1503 aa26.43■■□□□ 1.82
RCC1-209ENST00000430407 PHLPP1O60346 1717 aa26.42■■□□□ 1.82
RCC1-209ENST00000430407 MEX3CQ5U5Q3 659 aaKnown RBP26.37■■□□□ 1.81
RCC1-209ENST00000430407 SLC4A1APQ9BWU0 796 aaKnown RBP26.36■■□□□ 1.81
RCC1-209ENST00000430407 SPATA31A6Q5VVP1 1343 aa26.36■■□□□ 1.81
RCC1-209ENST00000430407 PTPRUQ92729 1446 aa26.34■■□□□ 1.81
RCC1-209ENST00000430407 SPHKAPQ2M3C7 1700 aa26.33■■□□□ 1.81
RCC1-209ENST00000430407 ACIN1Q9UKV3 1341 aaKnown RBP26.33■■□□□ 1.81
RCC1-209ENST00000430407 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.32■■□□□ 1.8
RCC1-209ENST00000430407 COL16A1Q07092 1604 aaPredicted RBP26.3■■□□□ 1.8
RCC1-209ENST00000430407 BRINP3Q76B58 766 aa26.3■■□□□ 1.8
RCC1-209ENST00000430407 DCCP43146 1447 aa26.3■■□□□ 1.8
RCC1-209ENST00000430407 SETBP1Q9Y6X0 1596 aa26.29■■□□□ 1.8
RCC1-209ENST00000430407 ZNF772Q68DY9 489 aaPredicted RBP26.28■■□□□ 1.8
RCC1-209ENST00000430407 SETD5Q9C0A6 1442 aa26.27■■□□□ 1.8
RCC1-209ENST00000430407 AHDC1Q5TGY3 1603 aaPredicted RBP26.27■■□□□ 1.8
RCC1-209ENST00000430407 METP08581 1390 aa26.26■■□□□ 1.79
RCC1-209ENST00000430407 VGFO15240 615 aaPredicted RBP26.23■■□□□ 1.79
RCC1-209ENST00000430407 NRXN3Q9Y4C0 1643 aa26.23■■□□□ 1.79
RCC1-209ENST00000430407 NUTM2BA6NNL0 878 aaPredicted RBP26.22■■□□□ 1.79
RCC1-209ENST00000430407 NUTM2EB1AL46 878 aaPredicted RBP26.22■■□□□ 1.79
RCC1-209ENST00000430407 NUTM2AQ8IVF1 878 aaPredicted RBP26.22■■□□□ 1.79
RCC1-209ENST00000430407 MPHOSPH9Q99550 1183 aa26.22■■□□□ 1.79
RCC1-209ENST00000430407 CLTCL1P53675 1640 aa26.21■■□□□ 1.79
RCC1-209ENST00000430407 XRN1Q8IZH2 1706 aaKnown RBP26.21■■□□□ 1.79
RCC1-209ENST00000430407 LRP6O75581 1613 aa26.21■■□□□ 1.79
RCC1-209ENST00000430407 LRRC59Q96AG4 307 aaKnown RBP26.19■■□□□ 1.78
RCC1-209ENST00000430407 MST1RQ04912 1400 aa26.19■■□□□ 1.78
RCC1-209ENST00000430407 NEXMIFQ5QGS0 1516 aa26.19■■□□□ 1.78
RCC1-209ENST00000430407 ASXL1Q8IXJ9 1541 aa26.18■■□□□ 1.78
RCC1-209ENST00000430407 ADGRL3Q9HAR2 1447 aa26.17■■□□□ 1.78
RCC1-209ENST00000430407 FOXD1Q16676 465 aa26.17■■□□□ 1.78
RCC1-209ENST00000430407 SHPRHQ149N8 1683 aa26.16■■□□□ 1.78
RCC1-209ENST00000430407 RAB3GAP2Q9H2M9 1393 aa26.16■■□□□ 1.78
RCC1-209ENST00000430407 RPGRIP1LQ68CZ1 1315 aa26.15■■□□□ 1.78
RCC1-209ENST00000430407 RXRBP28702 533 aa26.13■■□□□ 1.77
RCC1-209ENST00000430407 KIF1BO60333 1816 aa26.13■■□□□ 1.77
RCC1-209ENST00000430407 CCDC144AA2RUR9 1427 aa26.1■■□□□ 1.77
RCC1-209ENST00000430407 DDX17Q92841 729 aaKnown RBP26.09■■□□□ 1.77
RCC1-209ENST00000430407 HRCP23327 699 aa26.08■■□□□ 1.77
RCC1-209ENST00000430407 AFF2P51816 1311 aa26.08■■□□□ 1.77
RCC1-209ENST00000430407 PTCH1Q13635 1447 aa26.07■■□□□ 1.76
RCC1-209ENST00000430407 SETD1AO15047 1707 aaKnown RBP26.05■■□□□ 1.76
RCC1-209ENST00000430407 C1orf167Q5SNV9 1468 aa26.05■■□□□ 1.76
RCC1-209ENST00000430407 C8orf37Q96NL8 207 aa26.05■■□□□ 1.76
RCC1-209ENST00000430407 ROBO2Q9HCK4 1378 aa26.05■■□□□ 1.76
RCC1-209ENST00000430407 NHSL1Q5SYE7 1610 aa26.04■■□□□ 1.76
RCC1-209ENST00000430407 PNPLA6Q8IY17 1366 aa26.03■■□□□ 1.76
RCC1-209ENST00000430407 NALCNQ8IZF0 1738 aa26.02■■□□□ 1.76
RCC1-209ENST00000430407 ORAI2Q96SN7 254 aa26.01■■□□□ 1.75
RCC1-209ENST00000430407 UPF1Q92900 1129 aaKnown RBP eCLIP26■■□□□ 1.75
RCC1-209ENST00000430407 NGLY1Q96IV0 654 aa25.99■■□□□ 1.75
RCC1-209ENST00000430407 QTRT2Q9H974 415 aaKnown RBP25.99■■□□□ 1.75
RCC1-209ENST00000430407 SPATA31E1Q6ZUB1 1445 aa25.98■■□□□ 1.75
RCC1-209ENST00000430407 RGL3Q3MIN7 710 aa25.98■■□□□ 1.75
RCC1-209ENST00000430407 ADAMTS2O95450 1211 aa25.97■■□□□ 1.75
RCC1-209ENST00000430407 CDK12Q9NYV4 1490 aaPredicted RBP25.97■■□□□ 1.75
RCC1-209ENST00000430407 PRAG1Q86YV5 1406 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms