RNA–Protein interactions for RNA: ENST00000430142.5

TOP3B-204, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-204ENST00000430142 RGS17Q9UGC6 210 aaPredicted RBP23.22■■□□□ 1.31
TOP3B-204ENST00000430142 ZFYVE9O95405 1425 aa23.21■■□□□ 1.31
TOP3B-204ENST00000430142 RIMS2Q9UQ26 1411 aa23.19■■□□□ 1.3
TOP3B-204ENST00000430142 PPP1R15AO75807 674 aaPredicted RBP23.19■■□□□ 1.3
TOP3B-204ENST00000430142 HDGFP51858 240 aaKnown RBP23.19■■□□□ 1.3
TOP3B-204ENST00000430142 NWD1Q149M9 1564 aa23.18■■□□□ 1.3
TOP3B-204ENST00000430142 NKTRP30414 1462 aaKnown RBP23.18■■□□□ 1.3
TOP3B-204ENST00000430142 PLEKHG1Q9ULL1 1385 aa23.18■■□□□ 1.3
TOP3B-204ENST00000430142 CHGAP10645 457 aaKnown RBP23.18■■□□□ 1.3
TOP3B-204ENST00000430142 MYO5BQ9ULV0 1848 aa23.16■■□□□ 1.3
TOP3B-204ENST00000430142 ROBO1Q9Y6N7 1651 aa23.16■■□□□ 1.3
TOP3B-204ENST00000430142 TMEM131LA2VDJ0 1609 aa23.15■■□□□ 1.3
TOP3B-204ENST00000430142 MSH6P52701 1360 aa23.15■■□□□ 1.3
TOP3B-204ENST00000430142 GCC2Q8IWJ2 1684 aa23.15■■□□□ 1.3
TOP3B-204ENST00000430142 UNC13BO14795 1591 aa23.14■■□□□ 1.3
TOP3B-204ENST00000430142 NUTM2DQ5VT03 806 aaPredicted RBP23.14■■□□□ 1.29
TOP3B-204ENST00000430142 SLAIN2Q9P270 581 aa23.14■■□□□ 1.29
TOP3B-204ENST00000430142 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.13■■□□□ 1.29
TOP3B-204ENST00000430142 TBX22Q9Y458 520 aa23.13■■□□□ 1.29
TOP3B-204ENST00000430142 ROCK1Q13464 1354 aa23.13■■□□□ 1.29
TOP3B-204ENST00000430142 ITGAEP38570 1179 aa23.11■■□□□ 1.29
TOP3B-204ENST00000430142 CHD2O14647 1828 aaKnown RBP23.1■■□□□ 1.29
TOP3B-204ENST00000430142 E9PCH4 1651 aa23.1■■□□□ 1.29
TOP3B-204ENST00000430142 NUP155O75694 1391 aa23.09■■□□□ 1.29
TOP3B-204ENST00000430142 POTEAQ6S8J7 498 aa23.07■■□□□ 1.28
TOP3B-204ENST00000430142 PPARGC1BQ86YN6 1023 aaKnown RBP23.07■■□□□ 1.28
TOP3B-204ENST00000430142 ADAMTS13Q76LX8 1427 aa23.07■■□□□ 1.28
TOP3B-204ENST00000430142 IQGAP3Q86VI3 1631 aa23.06■■□□□ 1.28
TOP3B-204ENST00000430142 C14orf37Q86TY3 774 aa23.05■■□□□ 1.28
TOP3B-204ENST00000430142 NCOA3Q9Y6Q9 1424 aa23.03■■□□□ 1.28
TOP3B-204ENST00000430142 PHLPP1O60346 1717 aa23.02■■□□□ 1.28
TOP3B-204ENST00000430142 JCADQ9P266 1359 aa23.01■■□□□ 1.27
TOP3B-204ENST00000430142 C19orf44Q9H6X5 657 aa23■■□□□ 1.27
TOP3B-204ENST00000430142 PIK3R4Q99570 1358 aa23■■□□□ 1.27
TOP3B-204ENST00000430142 AMOTL2Q9Y2J4 779 aa22.99■■□□□ 1.27
TOP3B-204ENST00000430142 DIP2AQ14689 1571 aa22.98■■□□□ 1.27
TOP3B-204ENST00000430142 CADPS2Q86UW7 1296 aa22.98■■□□□ 1.27
TOP3B-204ENST00000430142 ATF3P18847 181 aa22.97■■□□□ 1.27
TOP3B-204ENST00000430142 PTPRUQ92729 1446 aa22.97■■□□□ 1.27
TOP3B-204ENST00000430142 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.94■■□□□ 1.26
TOP3B-204ENST00000430142 COL16A1Q07092 1604 aaPredicted RBP22.94■■□□□ 1.26
TOP3B-204ENST00000430142 TRPM2O94759 1503 aa22.94■■□□□ 1.26
TOP3B-204ENST00000430142 ZNF326Q5BKZ1 582 aaKnown RBP22.93■■□□□ 1.26
TOP3B-204ENST00000430142 SPATA31A6Q5VVP1 1343 aa22.88■■□□□ 1.25
TOP3B-204ENST00000430142 BRINP3Q76B58 766 aa22.88■■□□□ 1.25
TOP3B-204ENST00000430142 NRXN3Q9Y4C0 1643 aa22.88■■□□□ 1.25
TOP3B-204ENST00000430142 SPHKAPQ2M3C7 1700 aa22.88■■□□□ 1.25
TOP3B-204ENST00000430142 LRP6O75581 1613 aa22.87■■□□□ 1.25
TOP3B-204ENST00000430142 AHDC1Q5TGY3 1603 aaPredicted RBP22.87■■□□□ 1.25
TOP3B-204ENST00000430142 MEX3CQ5U5Q3 659 aaKnown RBP22.87■■□□□ 1.25
TOP3B-204ENST00000430142 METP08581 1390 aa22.87■■□□□ 1.25
TOP3B-204ENST00000430142 SETBP1Q9Y6X0 1596 aa22.86■■□□□ 1.25
TOP3B-204ENST00000430142 XRN1Q8IZH2 1706 aaKnown RBP22.83■■□□□ 1.25
TOP3B-204ENST00000430142 DCCP43146 1447 aa22.82■■□□□ 1.24
TOP3B-204ENST00000430142 ZNF772Q68DY9 489 aaPredicted RBP22.81■■□□□ 1.24
TOP3B-204ENST00000430142 CLTCL1P53675 1640 aa22.81■■□□□ 1.24
TOP3B-204ENST00000430142 NUTM2BA6NNL0 878 aaPredicted RBP22.8■■□□□ 1.24
TOP3B-204ENST00000430142 NUTM2EB1AL46 878 aaPredicted RBP22.8■■□□□ 1.24
TOP3B-204ENST00000430142 NUTM2AQ8IVF1 878 aaPredicted RBP22.8■■□□□ 1.24
TOP3B-204ENST00000430142 MST1RQ04912 1400 aa22.8■■□□□ 1.24
TOP3B-204ENST00000430142 NAIPQ13075 1403 aa22.8■■□□□ 1.24
TOP3B-204ENST00000430142 SHPRHQ149N8 1683 aa22.8■■□□□ 1.24
TOP3B-204ENST00000430142 SETD1AO15047 1707 aaKnown RBP22.79■■□□□ 1.24
TOP3B-204ENST00000430142 NEXMIFQ5QGS0 1516 aa22.79■■□□□ 1.24
TOP3B-204ENST00000430142 RRBP1Q9P2E9 1410 aaKnown RBP22.79■■□□□ 1.24
TOP3B-204ENST00000430142 ASXL1Q8IXJ9 1541 aa22.78■■□□□ 1.24
TOP3B-204ENST00000430142 DDX17Q92841 729 aaKnown RBP22.75■■□□□ 1.23
TOP3B-204ENST00000430142 TRIM52Q96A61 297 aa22.75■■□□□ 1.23
TOP3B-204ENST00000430142 SETD5Q9C0A6 1442 aa22.74■■□□□ 1.23
TOP3B-204ENST00000430142 ADGRL3Q9HAR2 1447 aa22.74■■□□□ 1.23
TOP3B-204ENST00000430142 LRRC59Q96AG4 307 aaKnown RBP22.73■■□□□ 1.23
TOP3B-204ENST00000430142 KIF1BO60333 1816 aa22.71■■□□□ 1.23
TOP3B-204ENST00000430142 VGFO15240 615 aaPredicted RBP22.71■■□□□ 1.23
TOP3B-204ENST00000430142 RXRBP28702 533 aa22.71■■□□□ 1.23
TOP3B-204ENST00000430142 NHSL1Q5SYE7 1610 aa22.7■■□□□ 1.22
TOP3B-204ENST00000430142 AFF2P51816 1311 aa22.69■■□□□ 1.22
TOP3B-204ENST00000430142 SLC4A1APQ9BWU0 796 aaKnown RBP22.69■■□□□ 1.22
TOP3B-204ENST00000430142 NALCNQ8IZF0 1738 aa22.68■■□□□ 1.22
TOP3B-204ENST00000430142 HFM1A2PYH4 1435 aa22.67■■□□□ 1.22
TOP3B-204ENST00000430142 ROBO2Q9HCK4 1378 aa22.67■■□□□ 1.22
TOP3B-204ENST00000430142 UPF1Q92900 1129 aaKnown RBP eCLIP22.67■■□□□ 1.22
TOP3B-204ENST00000430142 C1orf167Q5SNV9 1468 aa22.66■■□□□ 1.22
TOP3B-204ENST00000430142 RPGRIP1LQ68CZ1 1315 aa22.66■■□□□ 1.22
TOP3B-204ENST00000430142 PNPLA6Q8IY17 1366 aa22.65■■□□□ 1.22
TOP3B-204ENST00000430142 C8orf37Q96NL8 207 aa22.65■■□□□ 1.22
TOP3B-204ENST00000430142 PTCH1Q13635 1447 aa22.65■■□□□ 1.22
TOP3B-204ENST00000430142 ORAI2Q96SN7 254 aa22.64■■□□□ 1.21
TOP3B-204ENST00000430142 FOXD1Q16676 465 aa22.62■■□□□ 1.21
TOP3B-204ENST00000430142 QTRT2Q9H974 415 aaKnown RBP22.61■■□□□ 1.21
TOP3B-204ENST00000430142 ADAMTS2O95450 1211 aa22.59■■□□□ 1.21
TOP3B-204ENST00000430142 CDK12Q9NYV4 1490 aaPredicted RBP22.59■■□□□ 1.21
TOP3B-204ENST00000430142 SOS2Q07890 1332 aaPredicted RBP22.58■■□□□ 1.21
TOP3B-204ENST00000430142 PRAG1Q86YV5 1406 aa22.57■■□□□ 1.2
TOP3B-204ENST00000430142 NGLY1Q96IV0 654 aa22.57■■□□□ 1.2
TOP3B-204ENST00000430142 PPLO60437 1756 aa22.56■■□□□ 1.2
TOP3B-204ENST00000430142 RBM6P78332 1123 aaKnown RBP22.56■■□□□ 1.2
TOP3B-204ENST00000430142 LAMC1P11047 1609 aa22.55■■□□□ 1.2
TOP3B-204ENST00000430142 ADGRF5Q8IZF2 1346 aa22.55■■□□□ 1.2
TOP3B-204ENST00000430142 RGL3Q3MIN7 710 aa22.54■■□□□ 1.2
TOP3B-204ENST00000430142 RGS12O14924 1447 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms