RNA–Protein interactions for RNA: ENST00000429574.1

LIN28AP1-201, Transcript of LIN28A pseudogene 1, humanhuman

BASIC

Gene LIN28AP1, Length 405 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AP1-201ENST00000429574 SENP3Q9H4L4 574 aaPredicted RBP28.53■■■□□ 2.16
LIN28AP1-201ENST00000429574 MYO5BQ9ULV0 1848 aa28.51■■■□□ 2.15
LIN28AP1-201ENST00000429574 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.51■■■□□ 2.15
LIN28AP1-201ENST00000429574 KCNA6P17658 529 aa28.5■■■□□ 2.15
LIN28AP1-201ENST00000429574 RRBP1Q9P2E9 1410 aaKnown RBP28.5■■■□□ 2.15
LIN28AP1-201ENST00000429574 RIMS2Q9UQ26 1411 aa28.49■■■□□ 2.15
LIN28AP1-201ENST00000429574 PROSER2Q86WR7 435 aaPredicted RBP28.48■■■□□ 2.15
LIN28AP1-201ENST00000429574 TMEM131LA2VDJ0 1609 aa28.47■■■□□ 2.15
LIN28AP1-201ENST00000429574 PLEKHG1Q9ULL1 1385 aa28.43■■■□□ 2.14
LIN28AP1-201ENST00000429574 SOCS7O14512 581 aa28.43■■■□□ 2.14
LIN28AP1-201ENST00000429574 NUTM2DQ5VT03 806 aaPredicted RBP28.41■■■□□ 2.14
LIN28AP1-201ENST00000429574 TRIM52Q96A61 297 aa28.41■■■□□ 2.14
LIN28AP1-201ENST00000429574 ZFYVE9O95405 1425 aa28.41■■■□□ 2.14
LIN28AP1-201ENST00000429574 TMEM94Q12767 1356 aa28.39■■■□□ 2.14
LIN28AP1-201ENST00000429574 ZNF326Q5BKZ1 582 aaKnown RBP28.38■■■□□ 2.13
LIN28AP1-201ENST00000429574 ALKQ9UM73 1620 aa28.38■■■□□ 2.13
LIN28AP1-201ENST00000429574 XIRP1Q702N8 1843 aaKnown RBP28.37■■■□□ 2.13
LIN28AP1-201ENST00000429574 SPHKAPQ2M3C7 1700 aa28.36■■■□□ 2.13
LIN28AP1-201ENST00000429574 TBX22Q9Y458 520 aa28.36■■■□□ 2.13
LIN28AP1-201ENST00000429574 RBM33Q96EV2 1170 aaKnown RBP28.35■■■□□ 2.13
LIN28AP1-201ENST00000429574 NAIPQ13075 1403 aa28.35■■■□□ 2.13
LIN28AP1-201ENST00000429574 NKTRP30414 1462 aaKnown RBP28.34■■■□□ 2.13
LIN28AP1-201ENST00000429574 C14orf37Q86TY3 774 aa28.32■■■□□ 2.12
LIN28AP1-201ENST00000429574 MSH6P52701 1360 aa28.32■■■□□ 2.12
LIN28AP1-201ENST00000429574 CHD2O14647 1828 aaKnown RBP28.3■■■□□ 2.12
LIN28AP1-201ENST00000429574 NWD1Q149M9 1564 aa28.3■■■□□ 2.12
LIN28AP1-201ENST00000429574 MED1Q15648 1581 aaPredicted RBP28.29■■■□□ 2.12
LIN28AP1-201ENST00000429574 PHF23Q9BUL5 403 aaPredicted RBP28.28■■■□□ 2.12
LIN28AP1-201ENST00000429574 HFM1A2PYH4 1435 aa28.27■■■□□ 2.12
LIN28AP1-201ENST00000429574 DIP2AQ14689 1571 aa28.26■■■□□ 2.11
LIN28AP1-201ENST00000429574 SLC4A1APQ9BWU0 796 aaKnown RBP28.26■■■□□ 2.11
LIN28AP1-201ENST00000429574 PIK3R4Q99570 1358 aa28.24■■■□□ 2.11
LIN28AP1-201ENST00000429574 FAM135BQ49AJ0 1406 aa28.23■■■□□ 2.11
LIN28AP1-201ENST00000429574 KIF1BO60333 1816 aa28.22■■■□□ 2.11
LIN28AP1-201ENST00000429574 TRPM2O94759 1503 aa28.22■■■□□ 2.11
LIN28AP1-201ENST00000429574 ADAMTS13Q76LX8 1427 aa28.21■■■□□ 2.11
LIN28AP1-201ENST00000429574 SLAIN2Q9P270 581 aa28.2■■■□□ 2.1
LIN28AP1-201ENST00000429574 AMOTL2Q9Y2J4 779 aa28.19■■■□□ 2.1
LIN28AP1-201ENST00000429574 CLTCL1P53675 1640 aa28.18■■■□□ 2.1
LIN28AP1-201ENST00000429574 ATF3P18847 181 aa28.17■■■□□ 2.1
LIN28AP1-201ENST00000429574 NCOA3Q9Y6Q9 1424 aa28.17■■■□□ 2.1
LIN28AP1-201ENST00000429574 ROBO1Q9Y6N7 1651 aa28.16■■■□□ 2.1
LIN28AP1-201ENST00000429574 CADPS2Q86UW7 1296 aa28.13■■■□□ 2.09
LIN28AP1-201ENST00000429574 C19orf44Q9H6X5 657 aa28.13■■■□□ 2.09
LIN28AP1-201ENST00000429574 VGFO15240 615 aaPredicted RBP28.12■■■□□ 2.09
LIN28AP1-201ENST00000429574 SETBP1Q9Y6X0 1596 aa28.1■■■□□ 2.09
LIN28AP1-201ENST00000429574 ACIN1Q9UKV3 1341 aaKnown RBP28.07■■■□□ 2.08
LIN28AP1-201ENST00000429574 NEXMIFQ5QGS0 1516 aa28.07■■■□□ 2.08
LIN28AP1-201ENST00000429574 RPGRIP1LQ68CZ1 1315 aa28.06■■■□□ 2.08
LIN28AP1-201ENST00000429574 PTPRUQ92729 1446 aa28.05■■■□□ 2.08
LIN28AP1-201ENST00000429574 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.05■■■□□ 2.08
LIN28AP1-201ENST00000429574 NRXN3Q9Y4C0 1643 aa28.04■■■□□ 2.08
LIN28AP1-201ENST00000429574 FOXD1Q16676 465 aa28.04■■■□□ 2.08
LIN28AP1-201ENST00000429574 PHLPP1O60346 1717 aa28.04■■■□□ 2.08
LIN28AP1-201ENST00000429574 MPHOSPH9Q99550 1183 aa28.03■■■□□ 2.08
LIN28AP1-201ENST00000429574 METP08581 1390 aa28.01■■■□□ 2.07
LIN28AP1-201ENST00000429574 CCDC144AA2RUR9 1427 aa28■■■□□ 2.07
LIN28AP1-201ENST00000429574 XRN1Q8IZH2 1706 aaKnown RBP27.98■■■□□ 2.07
LIN28AP1-201ENST00000429574 RGL3Q3MIN7 710 aa27.96■■■□□ 2.07
LIN28AP1-201ENST00000429574 JCADQ9P266 1359 aa27.95■■■□□ 2.06
LIN28AP1-201ENST00000429574 SETD5Q9C0A6 1442 aa27.94■■■□□ 2.06
LIN28AP1-201ENST00000429574 DCCP43146 1447 aa27.93■■■□□ 2.06
LIN28AP1-201ENST00000429574 PPLO60437 1756 aa27.92■■■□□ 2.06
LIN28AP1-201ENST00000429574 BRINP3Q76B58 766 aa27.88■■■□□ 2.05
LIN28AP1-201ENST00000429574 MEX3CQ5U5Q3 659 aaKnown RBP27.87■■■□□ 2.05
LIN28AP1-201ENST00000429574 RGS17Q9UGC6 210 aaPredicted RBP27.87■■■□□ 2.05
LIN28AP1-201ENST00000429574 ADGRL3Q9HAR2 1447 aa27.86■■■□□ 2.05
LIN28AP1-201ENST00000429574 COL16A1Q07092 1604 aaPredicted RBP27.85■■■□□ 2.05
LIN28AP1-201ENST00000429574 ANKRD30BQ9BXX2 1392 aa27.85■■■□□ 2.05
LIN28AP1-201ENST00000429574 AHDC1Q5TGY3 1603 aaPredicted RBP27.84■■■□□ 2.05
LIN28AP1-201ENST00000429574 SPATA31A6Q5VVP1 1343 aa27.83■■■□□ 2.05
LIN28AP1-201ENST00000429574 MST1RQ04912 1400 aa27.82■■■□□ 2.04
LIN28AP1-201ENST00000429574 PTCH1Q13635 1447 aa27.82■■■□□ 2.04
LIN28AP1-201ENST00000429574 ADGRF5Q8IZF2 1346 aa27.81■■■□□ 2.04
LIN28AP1-201ENST00000429574 RAB3GAP2Q9H2M9 1393 aa27.81■■■□□ 2.04
LIN28AP1-201ENST00000429574 SETD1AO15047 1707 aaKnown RBP27.81■■■□□ 2.04
LIN28AP1-201ENST00000429574 NALCNQ8IZF0 1738 aa27.81■■■□□ 2.04
LIN28AP1-201ENST00000429574 ASXL1Q8IXJ9 1541 aa27.79■■■□□ 2.04
LIN28AP1-201ENST00000429574 STK26Q9P289 416 aa27.79■■■□□ 2.04
LIN28AP1-201ENST00000429574 SPATA31E1Q6ZUB1 1445 aa27.78■■■□□ 2.04
LIN28AP1-201ENST00000429574 ROBO2Q9HCK4 1378 aa27.78■■■□□ 2.04
LIN28AP1-201ENST00000429574 LRRC59Q96AG4 307 aaKnown RBP27.77■■■□□ 2.04
LIN28AP1-201ENST00000429574 NUTM2BA6NNL0 878 aaPredicted RBP27.76■■■□□ 2.03
LIN28AP1-201ENST00000429574 NUTM2EB1AL46 878 aaPredicted RBP27.76■■■□□ 2.03
LIN28AP1-201ENST00000429574 NUTM2AQ8IVF1 878 aaPredicted RBP27.76■■■□□ 2.03
LIN28AP1-201ENST00000429574 SHPRHQ149N8 1683 aa27.74■■■□□ 2.03
LIN28AP1-201ENST00000429574 IFT172Q9UG01 1749 aa27.73■■■□□ 2.03
LIN28AP1-201ENST00000429574 POTEAQ6S8J7 498 aa27.73■■■□□ 2.03
LIN28AP1-201ENST00000429574 C1orf167Q5SNV9 1468 aa27.7■■■□□ 2.03
LIN28AP1-201ENST00000429574 TMEM132EQ6IEE7 984 aa27.7■■■□□ 2.02
LIN28AP1-201ENST00000429574 NHSL1Q5SYE7 1610 aa27.7■■■□□ 2.02
LIN28AP1-201ENST00000429574 PRAG1Q86YV5 1406 aa27.69■■■□□ 2.02
LIN28AP1-201ENST00000429574 ZNF772Q68DY9 489 aaPredicted RBP27.69■■■□□ 2.02
LIN28AP1-201ENST00000429574 DDX17Q92841 729 aaKnown RBP27.69■■■□□ 2.02
LIN28AP1-201ENST00000429574 LRPPRCP42704 1394 aaKnown RBP27.67■■■□□ 2.02
LIN28AP1-201ENST00000429574 ORAI2Q96SN7 254 aa27.66■■■□□ 2.02
LIN28AP1-201ENST00000429574 PIK3C2GO75747 1445 aa27.66■■■□□ 2.02
LIN28AP1-201ENST00000429574 ESCO1Q5FWF5 840 aa27.65■■■□□ 2.02
LIN28AP1-201ENST00000429574 WAPLQ7Z5K2 1190 aa27.65■■■□□ 2.02
LIN28AP1-201ENST00000429574 LRP6O75581 1613 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms