RNA–Protein interactions for RNA: ENST00000428761.1

LINC00348-201, long intergenic non-protein coding RNA 348, humanhuman

TSL 3 BASIC

Gene LINC00348, Length 948 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00348-201ENST00000428761 ADGRG1Q9Y653 693 aa10.84□□□□□ -0.67
LINC00348-201ENST00000428761 TJAP1Q5JTD0 557 aa10.83□□□□□ -0.68
LINC00348-201ENST00000428761 RNF40O75150 1001 aa10.82□□□□□ -0.68
LINC00348-201ENST00000428761 HDGFP51858 240 aaKnown RBP10.81□□□□□ -0.68
LINC00348-201ENST00000428761 MTRQ99707 1265 aa10.8□□□□□ -0.68
LINC00348-201ENST00000428761 RBM46Q8TBY0 533 aaKnown RBP10.78□□□□□ -0.68
LINC00348-201ENST00000428761 IL21Q9HBE4 155 aa10.78□□□□□ -0.68
LINC00348-201ENST00000428761 ZC3H15Q8WU90 426 aaKnown RBP10.77□□□□□ -0.69
LINC00348-201ENST00000428761 ARXQ96QS3 562 aa10.77□□□□□ -0.69
LINC00348-201ENST00000428761 GFRA3O60609 400 aa10.76□□□□□ -0.69
LINC00348-201ENST00000428761 OATP04181 439 aa10.76□□□□□ -0.69
LINC00348-201ENST00000428761 PXYLP1Q8TE99 480 aa10.76□□□□□ -0.69
LINC00348-201ENST00000428761 PRKD2Q9BZL6 878 aa10.76□□□□□ -0.69
LINC00348-201ENST00000428761 LAPTM4AQ15012 233 aa10.75□□□□□ -0.69
LINC00348-201ENST00000428761 PPP1R18Q6NYC8 613 aa10.75□□□□□ -0.69
LINC00348-201ENST00000428761 ZNF516Q92618 1163 aa10.75□□□□□ -0.69
LINC00348-201ENST00000428761 RCCD1A6NED2 376 aa10.74□□□□□ -0.69
LINC00348-201ENST00000428761 METTL3Q86U44 580 aaKnown RBP10.74□□□□□ -0.69
LINC00348-201ENST00000428761 ZMYND10O75800 440 aa10.73□□□□□ -0.69
LINC00348-201ENST00000428761 APLP1P51693 650 aa10.73□□□□□ -0.69
LINC00348-201ENST00000428761 MAP2K5Q13163 448 aa10.73□□□□□ -0.69
LINC00348-201ENST00000428761 SWT1Q5T5J6 900 aaKnown RBP10.73□□□□□ -0.69
LINC00348-201ENST00000428761 IRF6O14896 467 aa10.72□□□□□ -0.69
LINC00348-201ENST00000428761 DNAJB2P25686 324 aa10.72□□□□□ -0.69
LINC00348-201ENST00000428761 BARGINQ6ZT62 677 aa10.72□□□□□ -0.69
LINC00348-201ENST00000428761 MINK1Q8N4C8 1332 aaPredicted RBP10.72□□□□□ -0.69
LINC00348-201ENST00000428761 PHOX2BQ99453 314 aa10.71□□□□□ -0.69
LINC00348-201ENST00000428761 TMEM134Q9H6X4 195 aa10.71□□□□□ -0.69
LINC00348-201ENST00000428761 NKX2-3Q8TAU0 364 aa10.7□□□□□ -0.7
LINC00348-201ENST00000428761 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.7□□□□□ -0.7
LINC00348-201ENST00000428761 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.69□□□□□ -0.7
LINC00348-201ENST00000428761 TRAF7Q6Q0C0 670 aa10.69□□□□□ -0.7
LINC00348-201ENST00000428761 COPS2P61201 443 aa10.68□□□□□ -0.7
LINC00348-201ENST00000428761 SLF2Q8IX21 1173 aa10.68□□□□□ -0.7
LINC00348-201ENST00000428761 BRPF1P55201 1214 aaPredicted RBP10.67□□□□□ -0.7
LINC00348-201ENST00000428761 NLRP7Q8WX94 980 aa10.67□□□□□ -0.7
LINC00348-201ENST00000428761 NECTIN2Q92692 538 aa10.67□□□□□ -0.7
LINC00348-201ENST00000428761 LCE2BO14633 110 aa10.66□□□□□ -0.7
LINC00348-201ENST00000428761 KRI1Q8N9T8 703 aaKnown RBP10.66□□□□□ -0.7
LINC00348-201ENST00000428761 CCDC102AQ96A19 550 aa10.66□□□□□ -0.7
LINC00348-201ENST00000428761 V9GY48 417 aaPredicted RBP10.66□□□□□ -0.7
LINC00348-201ENST00000428761 SLC4A3P48751 1232 aa10.65□□□□□ -0.7
LINC00348-201ENST00000428761 NRG2O14511 850 aaPredicted RBP10.64□□□□□ -0.71
LINC00348-201ENST00000428761 C14orf37Q86TY3 774 aa10.64□□□□□ -0.71
LINC00348-201ENST00000428761 GGCXP38435 758 aa10.63□□□□□ -0.71
LINC00348-201ENST00000428761 DAXXQ9UER7 740 aaPredicted RBP10.62□□□□□ -0.71
LINC00348-201ENST00000428761 SLC10A3P09131 477 aa10.61□□□□□ -0.71
LINC00348-201ENST00000428761 PDZRN3Q9UPQ7 1066 aa10.6□□□□□ -0.71
LINC00348-201ENST00000428761 ZPR1O75312 459 aa10.59□□□□□ -0.71
LINC00348-201ENST00000428761 PCDHB3Q9Y5E6 796 aa10.59□□□□□ -0.71
LINC00348-201ENST00000428761 PRR14Q9BWN1 585 aa10.57□□□□□ -0.72
LINC00348-201ENST00000428761 MDM2Q00987 491 aaPredicted RBP10.56□□□□□ -0.72
LINC00348-201ENST00000428761 TMUB1Q9BVT8 246 aa10.56□□□□□ -0.72
LINC00348-201ENST00000428761 BLOC1S3Q6QNY0 202 aa10.55□□□□□ -0.72
LINC00348-201ENST00000428761 AK7Q96M32 723 aa10.55□□□□□ -0.72
LINC00348-201ENST00000428761 SLC24A3Q9HC58 644 aa10.55□□□□□ -0.72
LINC00348-201ENST00000428761 DDX11L8A8MPP1 907 aa10.54□□□□□ -0.72
LINC00348-201ENST00000428761 REPIN1Q9BWE0 567 aaKnown RBP10.54□□□□□ -0.72
LINC00348-201ENST00000428761 TRIM66O15016 1216 aa10.53□□□□□ -0.72
LINC00348-201ENST00000428761 CFHP08603 1231 aa10.52□□□□□ -0.73
LINC00348-201ENST00000428761 NEUROD2Q15784 382 aa10.52□□□□□ -0.73
LINC00348-201ENST00000428761 RSPH4AQ5TD94 716 aa10.52□□□□□ -0.73
LINC00348-201ENST00000428761 HOMEZQ8IX15 550 aa10.52□□□□□ -0.73
LINC00348-201ENST00000428761 RNF223E7ERA6 249 aa10.51□□□□□ -0.73
LINC00348-201ENST00000428761 CLCN1P35523 988 aa10.51□□□□□ -0.73
LINC00348-201ENST00000428761 AMHR2Q16671 573 aa10.51□□□□□ -0.73
LINC00348-201ENST00000428761 SULF1Q8IWU6 871 aa10.51□□□□□ -0.73
LINC00348-201ENST00000428761 GPCPD1Q9NPB8 672 aa10.51□□□□□ -0.73
LINC00348-201ENST00000428761 ACTN4O43707 911 aaKnown RBP10.5□□□□□ -0.73
LINC00348-201ENST00000428761 TLL1O43897 1013 aa10.5□□□□□ -0.73
LINC00348-201ENST00000428761 ZNF787Q6DD87 383 aa10.5□□□□□ -0.73
LINC00348-201ENST00000428761 RDH13Q8NBN7 331 aa10.5□□□□□ -0.73
LINC00348-201ENST00000428761 SLC19A1P41440 591 aa10.49□□□□□ -0.73
LINC00348-201ENST00000428761 GCGRP47871 477 aa10.49□□□□□ -0.73
LINC00348-201ENST00000428761 KMT5BQ4FZB7 885 aa10.49□□□□□ -0.73
LINC00348-201ENST00000428761 CD46P15529 392 aa10.48□□□□□ -0.73
LINC00348-201ENST00000428761 FAM217BQ9NTX9 383 aaPredicted RBP10.48□□□□□ -0.73
LINC00348-201ENST00000428761 PPEF1O14829 653 aaPredicted RBP10.47□□□□□ -0.73
LINC00348-201ENST00000428761 S1PR4O95977 384 aa10.45□□□□□ -0.74
LINC00348-201ENST00000428761 EMID1Q96A84 441 aaPredicted RBP10.45□□□□□ -0.74
LINC00348-201ENST00000428761 SSTR3P32745 418 aaPredicted RBP10.44□□□□□ -0.74
LINC00348-201ENST00000428761 PDE4DQ08499 809 aa10.44□□□□□ -0.74
LINC00348-201ENST00000428761 TTLL12Q14166 644 aaPredicted RBP10.44□□□□□ -0.74
LINC00348-201ENST00000428761 TRIM67Q6ZTA4 783 aa10.44□□□□□ -0.74
LINC00348-201ENST00000428761 PARP9Q8IXQ6 854 aa10.44□□□□□ -0.74
LINC00348-201ENST00000428761 SPRYD7Q5W111 196 aa10.43□□□□□ -0.74
LINC00348-201ENST00000428761 GIGYF2Q6Y7W6 1299 aaKnown RBP10.43□□□□□ -0.74
LINC00348-201ENST00000428761 ANKLE1Q8NAG6 615 aa10.43□□□□□ -0.74
LINC00348-201ENST00000428761 FUT2Q10981 343 aa10.42□□□□□ -0.74
LINC00348-201ENST00000428761 PUS10Q3MIT2 529 aaKnown RBP10.42□□□□□ -0.74
LINC00348-201ENST00000428761 PKDCCQ504Y2 493 aa10.41□□□□□ -0.74
LINC00348-201ENST00000428761 ZNF598Q86UK7 904 aaKnown RBP10.41□□□□□ -0.74
LINC00348-201ENST00000428761 NR1I2O75469 434 aa10.4□□□□□ -0.74
LINC00348-201ENST00000428761 ATP6V1AP38606 617 aa10.4□□□□□ -0.74
LINC00348-201ENST00000428761 LIAT1Q6ZQX7 453 aa10.4□□□□□ -0.74
LINC00348-201ENST00000428761 ADH1BP00325 375 aa10.39□□□□□ -0.75
LINC00348-201ENST00000428761 MORN1Q5T089 497 aa10.39□□□□□ -0.75
LINC00348-201ENST00000428761 SCUBE3Q8IX30 993 aa10.39□□□□□ -0.75
LINC00348-201ENST00000428761 KDM4AO75164 1064 aa10.38□□□□□ -0.75
LINC00348-201ENST00000428761 ZNF697Q5TEC3 545 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms