RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 PROSER2Q86WR7 435 aaPredicted RBP18.28■□□□□ 0.52
TTC3-208ENST00000428693 GCC2Q8IWJ2 1684 aa18.28■□□□□ 0.52
TTC3-208ENST00000428693 UNC13BO14795 1591 aa18.27■□□□□ 0.52
TTC3-208ENST00000428693 KCNA6P17658 529 aa18.26■□□□□ 0.51
TTC3-208ENST00000428693 MYO5BQ9ULV0 1848 aa18.26■□□□□ 0.51
TTC3-208ENST00000428693 RIMS2Q9UQ26 1411 aa18.24■□□□□ 0.51
TTC3-208ENST00000428693 ALKQ9UM73 1620 aa18.23■□□□□ 0.51
TTC3-208ENST00000428693 E9PCH4 1651 aa18.23■□□□□ 0.51
TTC3-208ENST00000428693 TMEM94Q12767 1356 aa18.23■□□□□ 0.51
TTC3-208ENST00000428693 IQGAP3Q86VI3 1631 aa18.21■□□□□ 0.51
TTC3-208ENST00000428693 SOCS7O14512 581 aa18.21■□□□□ 0.51
TTC3-208ENST00000428693 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.21■□□□□ 0.51
TTC3-208ENST00000428693 XIRP1Q702N8 1843 aaKnown RBP18.2■□□□□ 0.5
TTC3-208ENST00000428693 TMEM131LA2VDJ0 1609 aa18.2■□□□□ 0.5
TTC3-208ENST00000428693 PLEKHG1Q9ULL1 1385 aa18.19■□□□□ 0.5
TTC3-208ENST00000428693 ZNF326Q5BKZ1 582 aaKnown RBP18.19■□□□□ 0.5
TTC3-208ENST00000428693 C14orf37Q86TY3 774 aa18.19■□□□□ 0.5
TTC3-208ENST00000428693 MED1Q15648 1581 aaPredicted RBP18.18■□□□□ 0.5
TTC3-208ENST00000428693 ZFYVE9O95405 1425 aa18.18■□□□□ 0.5
TTC3-208ENST00000428693 TRIM52Q96A61 297 aa18.17■□□□□ 0.5
TTC3-208ENST00000428693 MSH6P52701 1360 aa18.16■□□□□ 0.5
TTC3-208ENST00000428693 RRBP1Q9P2E9 1410 aaKnown RBP18.14■□□□□ 0.49
TTC3-208ENST00000428693 TBX22Q9Y458 520 aa18.13■□□□□ 0.49
TTC3-208ENST00000428693 NKTRP30414 1462 aaKnown RBP18.13■□□□□ 0.49
TTC3-208ENST00000428693 NWD1Q149M9 1564 aa18.11■□□□□ 0.49
TTC3-208ENST00000428693 SPHKAPQ2M3C7 1700 aa18.1■□□□□ 0.49
TTC3-208ENST00000428693 CHD2O14647 1828 aaKnown RBP18.09■□□□□ 0.49
TTC3-208ENST00000428693 NAIPQ13075 1403 aa18.09■□□□□ 0.49
TTC3-208ENST00000428693 FAM135BQ49AJ0 1406 aa18.09■□□□□ 0.49
TTC3-208ENST00000428693 SLAIN2Q9P270 581 aa18.09■□□□□ 0.49
TTC3-208ENST00000428693 ROBO1Q9Y6N7 1651 aa18.08■□□□□ 0.48
TTC3-208ENST00000428693 ADAMTS13Q76LX8 1427 aa18.07■□□□□ 0.48
TTC3-208ENST00000428693 AMOTL2Q9Y2J4 779 aa18.07■□□□□ 0.48
TTC3-208ENST00000428693 ATF3P18847 181 aa18.06■□□□□ 0.48
TTC3-208ENST00000428693 SLC4A1APQ9BWU0 796 aaKnown RBP18.05■□□□□ 0.48
TTC3-208ENST00000428693 DIP2AQ14689 1571 aa18.04■□□□□ 0.48
TTC3-208ENST00000428693 TRPM2O94759 1503 aa18.03■□□□□ 0.48
TTC3-208ENST00000428693 HFM1A2PYH4 1435 aa18.02■□□□□ 0.48
TTC3-208ENST00000428693 C19orf44Q9H6X5 657 aa18.02■□□□□ 0.48
TTC3-208ENST00000428693 PIK3R4Q99570 1358 aa18.02■□□□□ 0.47
TTC3-208ENST00000428693 CLTCL1P53675 1640 aa18.01■□□□□ 0.47
TTC3-208ENST00000428693 CADPS2Q86UW7 1296 aa18.01■□□□□ 0.47
TTC3-208ENST00000428693 KIF1BO60333 1816 aa18■□□□□ 0.47
TTC3-208ENST00000428693 PTPRUQ92729 1446 aa17.99■□□□□ 0.47
TTC3-208ENST00000428693 PHLPP1O60346 1717 aa17.99■□□□□ 0.47
TTC3-208ENST00000428693 FOXD1Q16676 465 aa17.99■□□□□ 0.47
TTC3-208ENST00000428693 NCOA3Q9Y6Q9 1424 aa17.98■□□□□ 0.47
TTC3-208ENST00000428693 METP08581 1390 aa17.97■□□□□ 0.47
TTC3-208ENST00000428693 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.97■□□□□ 0.47
TTC3-208ENST00000428693 NRXN3Q9Y4C0 1643 aa17.95■□□□□ 0.46
TTC3-208ENST00000428693 VGFO15240 615 aaPredicted RBP17.95■□□□□ 0.46
TTC3-208ENST00000428693 SETBP1Q9Y6X0 1596 aa17.95■□□□□ 0.46
TTC3-208ENST00000428693 NEXMIFQ5QGS0 1516 aa17.94■□□□□ 0.46
TTC3-208ENST00000428693 JCADQ9P266 1359 aa17.93■□□□□ 0.46
TTC3-208ENST00000428693 MEX3CQ5U5Q3 659 aaKnown RBP17.93■□□□□ 0.46
TTC3-208ENST00000428693 RGS17Q9UGC6 210 aaPredicted RBP17.93■□□□□ 0.46
TTC3-208ENST00000428693 RGL3Q3MIN7 710 aa17.92■□□□□ 0.46
TTC3-208ENST00000428693 BRINP3Q76B58 766 aa17.9■□□□□ 0.46
TTC3-208ENST00000428693 XRN1Q8IZH2 1706 aaKnown RBP17.89■□□□□ 0.46
TTC3-208ENST00000428693 MPHOSPH9Q99550 1183 aa17.89■□□□□ 0.45
TTC3-208ENST00000428693 RPGRIP1LQ68CZ1 1315 aa17.89■□□□□ 0.45
TTC3-208ENST00000428693 NUTM2BA6NNL0 878 aaPredicted RBP17.88■□□□□ 0.45
TTC3-208ENST00000428693 NUTM2EB1AL46 878 aaPredicted RBP17.88■□□□□ 0.45
TTC3-208ENST00000428693 POTEAQ6S8J7 498 aa17.88■□□□□ 0.45
TTC3-208ENST00000428693 NUTM2AQ8IVF1 878 aaPredicted RBP17.88■□□□□ 0.45
TTC3-208ENST00000428693 CCDC144AA2RUR9 1427 aa17.88■□□□□ 0.45
TTC3-208ENST00000428693 COL16A1Q07092 1604 aaPredicted RBP17.87■□□□□ 0.45
TTC3-208ENST00000428693 DCCP43146 1447 aa17.85■□□□□ 0.45
TTC3-208ENST00000428693 ADGRL3Q9HAR2 1447 aa17.84■□□□□ 0.45
TTC3-208ENST00000428693 SPATA31A6Q5VVP1 1343 aa17.84■□□□□ 0.45
TTC3-208ENST00000428693 DDX17Q92841 729 aaKnown RBP17.84■□□□□ 0.45
TTC3-208ENST00000428693 AHDC1Q5TGY3 1603 aaPredicted RBP17.83■□□□□ 0.45
TTC3-208ENST00000428693 MST1RQ04912 1400 aa17.83■□□□□ 0.45
TTC3-208ENST00000428693 STK26Q9P289 416 aa17.83■□□□□ 0.44
TTC3-208ENST00000428693 ASXL1Q8IXJ9 1541 aa17.82■□□□□ 0.44
TTC3-208ENST00000428693 ROBO2Q9HCK4 1378 aa17.82■□□□□ 0.44
TTC3-208ENST00000428693 PPLO60437 1756 aa17.82■□□□□ 0.44
TTC3-208ENST00000428693 ADGRF5Q8IZF2 1346 aa17.81■□□□□ 0.44
TTC3-208ENST00000428693 NALCNQ8IZF0 1738 aa17.81■□□□□ 0.44
TTC3-208ENST00000428693 SETD5Q9C0A6 1442 aa17.8■□□□□ 0.44
TTC3-208ENST00000428693 LRRC59Q96AG4 307 aaKnown RBP17.79■□□□□ 0.44
TTC3-208ENST00000428693 LRP6O75581 1613 aa17.79■□□□□ 0.44
TTC3-208ENST00000428693 PTCH1Q13635 1447 aa17.78■□□□□ 0.44
TTC3-208ENST00000428693 ZNF772Q68DY9 489 aaPredicted RBP17.77■□□□□ 0.44
TTC3-208ENST00000428693 TMEM132EQ6IEE7 984 aa17.77■□□□□ 0.44
TTC3-208ENST00000428693 ORAI2Q96SN7 254 aa17.77■□□□□ 0.44
TTC3-208ENST00000428693 SETD1AO15047 1707 aaKnown RBP17.77■□□□□ 0.44
TTC3-208ENST00000428693 SHPRHQ149N8 1683 aa17.77■□□□□ 0.43
TTC3-208ENST00000428693 C1orf167Q5SNV9 1468 aa17.76■□□□□ 0.43
TTC3-208ENST00000428693 ANKRD30BQ9BXX2 1392 aa17.76■□□□□ 0.43
TTC3-208ENST00000428693 NUTM2FA1L443 756 aa17.75■□□□□ 0.43
TTC3-208ENST00000428693 ACIN1Q9UKV3 1341 aaKnown RBP17.74■□□□□ 0.43
TTC3-208ENST00000428693 WAPLQ7Z5K2 1190 aa17.74■□□□□ 0.43
TTC3-208ENST00000428693 C8orf37Q96NL8 207 aa17.74■□□□□ 0.43
TTC3-208ENST00000428693 RAB3GAP2Q9H2M9 1393 aa17.74■□□□□ 0.43
TTC3-208ENST00000428693 SPATA31E1Q6ZUB1 1445 aa17.73■□□□□ 0.43
TTC3-208ENST00000428693 NHSL1Q5SYE7 1610 aa17.73■□□□□ 0.43
TTC3-208ENST00000428693 ESCO1Q5FWF5 840 aa17.73■□□□□ 0.43
TTC3-208ENST00000428693 ADAMTS2O95450 1211 aa17.72■□□□□ 0.43
TTC3-208ENST00000428693 AFF2P51816 1311 aa17.71■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms