RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 ZBED2Q9BTP6 218 aa12.23□□□□□ -0.45
HMGB1P32-201ENST00000425971 MCM6Q14566 821 aa12.22□□□□□ -0.45
HMGB1P32-201ENST00000425971 ERBB3P21860 1342 aa12.21□□□□□ -0.45
HMGB1P32-201ENST00000425971 SPIRE2Q8WWL2 714 aa12.21□□□□□ -0.45
HMGB1P32-201ENST00000425971 SMAPO00193 183 aa12.2□□□□□ -0.46
HMGB1P32-201ENST00000425971 KCNH8Q96L42 1107 aa12.2□□□□□ -0.46
HMGB1P32-201ENST00000425971 HS3ST6Q96QI5 342 aa12.2□□□□□ -0.46
HMGB1P32-201ENST00000425971 DDX11L8A8MPP1 907 aa12.18□□□□□ -0.46
HMGB1P32-201ENST00000425971 LIMD1Q9UGP4 676 aa12.18□□□□□ -0.46
HMGB1P32-201ENST00000425971 TUSC1Q2TAM9 212 aa12.17□□□□□ -0.46
HMGB1P32-201ENST00000425971 POTEEQ6S8J3 1075 aa12.17□□□□□ -0.46
HMGB1P32-201ENST00000425971 CDAN1Q8IWY9 1227 aa12.17□□□□□ -0.46
HMGB1P32-201ENST00000425971 KIAA1468Q9P260 1216 aa12.17□□□□□ -0.46
HMGB1P32-201ENST00000425971 POTEB3A0JP26 581 aa12.16□□□□□ -0.46
HMGB1P32-201ENST00000425971 SPTLC1O15269 473 aa12.16□□□□□ -0.46
HMGB1P32-201ENST00000425971 PSEN2P49810 448 aa12.16□□□□□ -0.46
HMGB1P32-201ENST00000425971 VARS2Q5ST30 1063 aaKnown RBP12.16□□□□□ -0.46
HMGB1P32-201ENST00000425971 POTEBQ6S5H4 581 aa12.16□□□□□ -0.46
HMGB1P32-201ENST00000425971 SLC4A5Q9BY07 1137 aa12.16□□□□□ -0.46
HMGB1P32-201ENST00000425971 PCDH10Q9P2E7 1040 aa12.16□□□□□ -0.46
HMGB1P32-201ENST00000425971 A6NJR5 290 aa12.15□□□□□ -0.46
HMGB1P32-201ENST00000425971 FBXO31Q5XUX0 539 aaPredicted RBP12.15□□□□□ -0.46
HMGB1P32-201ENST00000425971 PPP2R2DQ66LE6 453 aa12.15□□□□□ -0.46
HMGB1P32-201ENST00000425971 RIC3Q7Z5B4 369 aa12.15□□□□□ -0.46
HMGB1P32-201ENST00000425971 ARHGAP33O14559 1287 aa12.14□□□□□ -0.47
HMGB1P32-201ENST00000425971 RFC5P40937 340 aa12.13□□□□□ -0.47
HMGB1P32-201ENST00000425971 RSBN1LQ6PCB5 846 aaPredicted RBP12.13□□□□□ -0.47
HMGB1P32-201ENST00000425971 NUTM1Q86Y26 1132 aa12.13□□□□□ -0.47
HMGB1P32-201ENST00000425971 RABGEF1Q9UJ41 708 aa12.13□□□□□ -0.47
HMGB1P32-201ENST00000425971 ATP1B4Q9UN42 357 aaPredicted RBP12.13□□□□□ -0.47
HMGB1P32-201ENST00000425971 MOXD2PA6NHM9 499 aa12.12□□□□□ -0.47
HMGB1P32-201ENST00000425971 GJA5P36382 358 aa12.12□□□□□ -0.47
HMGB1P32-201ENST00000425971 HOMEZQ8IX15 550 aa12.12□□□□□ -0.47
HMGB1P32-201ENST00000425971 UBTFP17480 764 aaKnown RBP12.11□□□□□ -0.47
HMGB1P32-201ENST00000425971 PBX2P40425 430 aa12.11□□□□□ -0.47
HMGB1P32-201ENST00000425971 BANK1Q8NDB2 785 aa12.11□□□□□ -0.47
HMGB1P32-201ENST00000425971 CLUAP1Q96AJ1 413 aa12.11□□□□□ -0.47
HMGB1P32-201ENST00000425971 SPDYE5A6NIY4 337 aa12.1□□□□□ -0.47
HMGB1P32-201ENST00000425971 DMRTA1Q5VZB9 504 aa12.1□□□□□ -0.47
HMGB1P32-201ENST00000425971 RDH13Q8NBN7 331 aa12.1□□□□□ -0.47
HMGB1P32-201ENST00000425971 C1orf115Q9H7X2 142 aa12.1□□□□□ -0.47
HMGB1P32-201ENST00000425971 SWT1Q5T5J6 900 aaKnown RBP12.09□□□□□ -0.47
HMGB1P32-201ENST00000425971 SEPT9Q9UHD8 586 aaPredicted RBP12.08□□□□□ -0.48
HMGB1P32-201ENST00000425971 KDM4AO75164 1064 aa12.07□□□□□ -0.48
HMGB1P32-201ENST00000425971 SLC10A3P09131 477 aa12.07□□□□□ -0.48
HMGB1P32-201ENST00000425971 GCGRP47871 477 aa12.07□□□□□ -0.48
HMGB1P32-201ENST00000425971 TMEM259Q4ZIN3 620 aa12.07□□□□□ -0.48
HMGB1P32-201ENST00000425971 AXIN2Q9Y2T1 843 aa12.07□□□□□ -0.48
HMGB1P32-201ENST00000425971 NDUFV2P19404 249 aa12.06□□□□□ -0.48
HMGB1P32-201ENST00000425971 ZNF687Q8N1G0 1237 aa12.06□□□□□ -0.48
HMGB1P32-201ENST00000425971 VPS9D1Q9Y2B5 631 aa12.06□□□□□ -0.48
HMGB1P32-201ENST00000425971 TRAK2O60296 914 aa12.05□□□□□ -0.48
HMGB1P32-201ENST00000425971 LILRB3O75022 631 aa12.05□□□□□ -0.48
HMGB1P32-201ENST00000425971 USP46P62068 366 aa12.05□□□□□ -0.48
HMGB1P32-201ENST00000425971 QPCTQ16769 361 aa12.05□□□□□ -0.48
HMGB1P32-201ENST00000425971 FAM98CQ17RN3 349 aaKnown RBP12.05□□□□□ -0.48
HMGB1P32-201ENST00000425971 HOXA2O43364 376 aa12.04□□□□□ -0.48
HMGB1P32-201ENST00000425971 POM121Q96HA1 1249 aa12.04□□□□□ -0.48
HMGB1P32-201ENST00000425971 SNRKQ9NRH2 765 aa12.04□□□□□ -0.48
HMGB1P32-201ENST00000425971 CSPP1Q1MSJ5 1256 aa12.03□□□□□ -0.48
HMGB1P32-201ENST00000425971 RSPH4AQ5TD94 716 aa12.03□□□□□ -0.48
HMGB1P32-201ENST00000425971 PCDHB15Q9Y5E8 787 aa12.03□□□□□ -0.48
HMGB1P32-201ENST00000425971 ARID3CA6NKF2 412 aa12.02□□□□□ -0.49
HMGB1P32-201ENST00000425971 PROSER2Q86WR7 435 aaPredicted RBP12.02□□□□□ -0.49
HMGB1P32-201ENST00000425971 SOCS7O14512 581 aa12.01□□□□□ -0.49
HMGB1P32-201ENST00000425971 PRPF38BQ5VTL8 546 aaKnown RBP12.01□□□□□ -0.49
HMGB1P32-201ENST00000425971 LAPTM4BQ86VI4 370 aa12.01□□□□□ -0.49
HMGB1P32-201ENST00000425971 FNBP4Q8N3X1 1017 aaPredicted RBP12.01□□□□□ -0.49
HMGB1P32-201ENST00000425971 KRTAP3-3Q9BYR6 98 aa12.01□□□□□ -0.49
HMGB1P32-201ENST00000425971 KRTAP3-2Q9BYR7 98 aa12.01□□□□□ -0.49
HMGB1P32-201ENST00000425971 COG6Q9Y2V7 657 aa12.01□□□□□ -0.49
HMGB1P32-201ENST00000425971 APBB1O00213 710 aa12□□□□□ -0.49
HMGB1P32-201ENST00000425971 BHMG1C9JSJ3 638 aaPredicted RBP11.99□□□□□ -0.49
HMGB1P32-201ENST00000425971 FDX1P10109 184 aa11.99□□□□□ -0.49
HMGB1P32-201ENST00000425971 RTL5Q5HYW3 569 aaPredicted RBP11.99□□□□□ -0.49
HMGB1P32-201ENST00000425971 MTMR14Q8NCE2 650 aa11.99□□□□□ -0.49
HMGB1P32-201ENST00000425971 RAD21O60216 631 aa11.98□□□□□ -0.49
HMGB1P32-201ENST00000425971 SAMD7Q7Z3H4 446 aa11.98□□□□□ -0.49
HMGB1P32-201ENST00000425971 SLF2Q8IX21 1173 aa11.98□□□□□ -0.49
HMGB1P32-201ENST00000425971 CABLES1Q8TDN4 633 aa11.98□□□□□ -0.49
HMGB1P32-201ENST00000425971 NBPF3Q9H094 633 aa11.98□□□□□ -0.49
HMGB1P32-201ENST00000425971 PCDHGC3Q9UN70 934 aa11.98□□□□□ -0.49
HMGB1P32-201ENST00000425971 TK2O00142 265 aa11.97□□□□□ -0.49
HMGB1P32-201ENST00000425971 HDGFP51858 240 aaKnown RBP11.97□□□□□ -0.49
HMGB1P32-201ENST00000425971 ZBTB3Q9H5J0 574 aa11.97□□□□□ -0.49
HMGB1P32-201ENST00000425971 HRCP23327 699 aa11.96□□□□□ -0.49
HMGB1P32-201ENST00000425971 GUCA2AQ02747 115 aa11.96□□□□□ -0.49
HMGB1P32-201ENST00000425971 HLA-CQ95604 372 aa11.96□□□□□ -0.49
HMGB1P32-201ENST00000425971 NUTM2BA6NNL0 878 aaPredicted RBP11.94□□□□□ -0.5
HMGB1P32-201ENST00000425971 NUTM2EB1AL46 878 aaPredicted RBP11.94□□□□□ -0.5
HMGB1P32-201ENST00000425971 SLC4A3P48751 1232 aa11.94□□□□□ -0.5
HMGB1P32-201ENST00000425971 NUTM2DQ5VT03 806 aaPredicted RBP11.94□□□□□ -0.5
HMGB1P32-201ENST00000425971 NUTM2AQ8IVF1 878 aaPredicted RBP11.94□□□□□ -0.5
HMGB1P32-201ENST00000425971 PLSCR2Q9NRY7 297 aa11.94□□□□□ -0.5
HMGB1P32-201ENST00000425971 AP1G2O75843 785 aa11.93□□□□□ -0.5
HMGB1P32-201ENST00000425971 CFHP08603 1231 aa11.93□□□□□ -0.5
HMGB1P32-201ENST00000425971 USP17L8P0C7I0 530 aa11.93□□□□□ -0.5
HMGB1P32-201ENST00000425971 FUT2Q10981 343 aa11.92□□□□□ -0.5
HMGB1P32-201ENST00000425971 ZFRQ96KR1 1074 aaKnown RBP11.92□□□□□ -0.5
HMGB1P32-201ENST00000425971 ARID3AQ99856 593 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms