RNA–Protein interactions for RNA: ENST00000425451.2

HDAC7-208, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-208ENST00000425451 NWD1Q149M9 1564 aa27.26■■□□□ 1.95
HDAC7-208ENST00000425451 ZFYVE9O95405 1425 aa27.25■■□□□ 1.95
HDAC7-208ENST00000425451 NKTRP30414 1462 aaKnown RBP27.23■■□□□ 1.95
HDAC7-208ENST00000425451 ROBO1Q9Y6N7 1651 aa27.21■■□□□ 1.95
HDAC7-208ENST00000425451 MYO5BQ9ULV0 1848 aa27.2■■□□□ 1.95
HDAC7-208ENST00000425451 BCANQ96GW7 911 aa27.2■■□□□ 1.94
HDAC7-208ENST00000425451 PLEKHG1Q9ULL1 1385 aa27.2■■□□□ 1.94
HDAC7-208ENST00000425451 TMEM131LA2VDJ0 1609 aa27.19■■□□□ 1.94
HDAC7-208ENST00000425451 RIMS2Q9UQ26 1411 aa27.19■■□□□ 1.94
HDAC7-208ENST00000425451 UNC13BO14795 1591 aa27.18■■□□□ 1.94
HDAC7-208ENST00000425451 GCC2Q8IWJ2 1684 aa27.18■■□□□ 1.94
HDAC7-208ENST00000425451 CHD2O14647 1828 aaKnown RBP27.15■■□□□ 1.94
HDAC7-208ENST00000425451 MSH6P52701 1360 aa27.14■■□□□ 1.94
HDAC7-208ENST00000425451 HDGFP51858 240 aaKnown RBP27.14■■□□□ 1.94
HDAC7-208ENST00000425451 ROCK1Q13464 1354 aa27.13■■□□□ 1.93
HDAC7-208ENST00000425451 PPP1R15AO75807 674 aaPredicted RBP27.13■■□□□ 1.93
HDAC7-208ENST00000425451 SLAIN2Q9P270 581 aa27.13■■□□□ 1.93
HDAC7-208ENST00000425451 TBX22Q9Y458 520 aa27.13■■□□□ 1.93
HDAC7-208ENST00000425451 E9PCH4 1651 aa27.13■■□□□ 1.93
HDAC7-208ENST00000425451 CHGAP10645 457 aaKnown RBP27.09■■□□□ 1.93
HDAC7-208ENST00000425451 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.09■■□□□ 1.93
HDAC7-208ENST00000425451 ADAMTS13Q76LX8 1427 aa27.08■■□□□ 1.93
HDAC7-208ENST00000425451 IQGAP3Q86VI3 1631 aa27.08■■□□□ 1.93
HDAC7-208ENST00000425451 NUTM2DQ5VT03 806 aaPredicted RBP27.07■■□□□ 1.92
HDAC7-208ENST00000425451 POTEAQ6S8J7 498 aa27.07■■□□□ 1.92
HDAC7-208ENST00000425451 NCOA3Q9Y6Q9 1424 aa27.05■■□□□ 1.92
HDAC7-208ENST00000425451 PHLPP1O60346 1717 aa27.02■■□□□ 1.92
HDAC7-208ENST00000425451 NUP155O75694 1391 aa27.02■■□□□ 1.92
HDAC7-208ENST00000425451 DIP2AQ14689 1571 aa27■■□□□ 1.91
HDAC7-208ENST00000425451 PIK3R4Q99570 1358 aa26.99■■□□□ 1.91
HDAC7-208ENST00000425451 JCADQ9P266 1359 aa26.99■■□□□ 1.91
HDAC7-208ENST00000425451 ITGAEP38570 1179 aa26.98■■□□□ 1.91
HDAC7-208ENST00000425451 COL16A1Q07092 1604 aaPredicted RBP26.97■■□□□ 1.91
HDAC7-208ENST00000425451 C19orf44Q9H6X5 657 aa26.96■■□□□ 1.91
HDAC7-208ENST00000425451 C14orf37Q86TY3 774 aa26.95■■□□□ 1.9
HDAC7-208ENST00000425451 PTPRUQ92729 1446 aa26.95■■□□□ 1.9
HDAC7-208ENST00000425451 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.95■■□□□ 1.9
HDAC7-208ENST00000425451 AMOTL2Q9Y2J4 779 aa26.94■■□□□ 1.9
HDAC7-208ENST00000425451 CADPS2Q86UW7 1296 aa26.93■■□□□ 1.9
HDAC7-208ENST00000425451 TRPM2O94759 1503 aa26.92■■□□□ 1.9
HDAC7-208ENST00000425451 PPARGC1BQ86YN6 1023 aaKnown RBP26.92■■□□□ 1.9
HDAC7-208ENST00000425451 ATF3P18847 181 aa26.9■■□□□ 1.9
HDAC7-208ENST00000425451 NRXN3Q9Y4C0 1643 aa26.89■■□□□ 1.9
HDAC7-208ENST00000425451 AHDC1Q5TGY3 1603 aaPredicted RBP26.88■■□□□ 1.89
HDAC7-208ENST00000425451 LRP6O75581 1613 aa26.87■■□□□ 1.89
HDAC7-208ENST00000425451 SPHKAPQ2M3C7 1700 aa26.86■■□□□ 1.89
HDAC7-208ENST00000425451 SPATA31A6Q5VVP1 1343 aa26.86■■□□□ 1.89
HDAC7-208ENST00000425451 SETBP1Q9Y6X0 1596 aa26.85■■□□□ 1.89
HDAC7-208ENST00000425451 BRINP3Q76B58 766 aa26.84■■□□□ 1.89
HDAC7-208ENST00000425451 XRN1Q8IZH2 1706 aaKnown RBP26.84■■□□□ 1.89
HDAC7-208ENST00000425451 METP08581 1390 aa26.82■■□□□ 1.88
HDAC7-208ENST00000425451 DCCP43146 1447 aa26.81■■□□□ 1.88
HDAC7-208ENST00000425451 SHPRHQ149N8 1683 aa26.8■■□□□ 1.88
HDAC7-208ENST00000425451 ZNF326Q5BKZ1 582 aaKnown RBP26.8■■□□□ 1.88
HDAC7-208ENST00000425451 SETD1AO15047 1707 aaKnown RBP26.78■■□□□ 1.88
HDAC7-208ENST00000425451 CLTCL1P53675 1640 aa26.76■■□□□ 1.87
HDAC7-208ENST00000425451 MST1RQ04912 1400 aa26.76■■□□□ 1.87
HDAC7-208ENST00000425451 NEXMIFQ5QGS0 1516 aa26.75■■□□□ 1.87
HDAC7-208ENST00000425451 MEX3CQ5U5Q3 659 aaKnown RBP26.75■■□□□ 1.87
HDAC7-208ENST00000425451 ASXL1Q8IXJ9 1541 aa26.75■■□□□ 1.87
HDAC7-208ENST00000425451 RRBP1Q9P2E9 1410 aaKnown RBP26.73■■□□□ 1.87
HDAC7-208ENST00000425451 ZNF772Q68DY9 489 aaPredicted RBP26.73■■□□□ 1.87
HDAC7-208ENST00000425451 NAIPQ13075 1403 aa26.73■■□□□ 1.87
HDAC7-208ENST00000425451 SETD5Q9C0A6 1442 aa26.71■■□□□ 1.87
HDAC7-208ENST00000425451 ADGRL3Q9HAR2 1447 aa26.7■■□□□ 1.86
HDAC7-208ENST00000425451 NHSL1Q5SYE7 1610 aa26.68■■□□□ 1.86
HDAC7-208ENST00000425451 NUTM2BA6NNL0 878 aaPredicted RBP26.68■■□□□ 1.86
HDAC7-208ENST00000425451 NUTM2EB1AL46 878 aaPredicted RBP26.68■■□□□ 1.86
HDAC7-208ENST00000425451 NUTM2AQ8IVF1 878 aaPredicted RBP26.68■■□□□ 1.86
HDAC7-208ENST00000425451 NALCNQ8IZF0 1738 aa26.65■■□□□ 1.86
HDAC7-208ENST00000425451 KIF1BO60333 1816 aa26.65■■□□□ 1.86
HDAC7-208ENST00000425451 DDX17Q92841 729 aaKnown RBP26.65■■□□□ 1.86
HDAC7-208ENST00000425451 TRIM52Q96A61 297 aa26.64■■□□□ 1.86
HDAC7-208ENST00000425451 LRRC59Q96AG4 307 aaKnown RBP26.64■■□□□ 1.86
HDAC7-208ENST00000425451 RXRBP28702 533 aa26.61■■□□□ 1.85
HDAC7-208ENST00000425451 UPF1Q92900 1129 aaKnown RBP eCLIP26.61■■□□□ 1.85
HDAC7-208ENST00000425451 VGFO15240 615 aaPredicted RBP26.6■■□□□ 1.85
HDAC7-208ENST00000425451 AFF2P51816 1311 aa26.6■■□□□ 1.85
HDAC7-208ENST00000425451 PNPLA6Q8IY17 1366 aa26.58■■□□□ 1.85
HDAC7-208ENST00000425451 ROBO2Q9HCK4 1378 aa26.58■■□□□ 1.85
HDAC7-208ENST00000425451 HFM1A2PYH4 1435 aa26.58■■□□□ 1.85
HDAC7-208ENST00000425451 PTCH1Q13635 1447 aa26.58■■□□□ 1.85
HDAC7-208ENST00000425451 C1orf167Q5SNV9 1468 aa26.58■■□□□ 1.85
HDAC7-208ENST00000425451 CDK12Q9NYV4 1490 aaPredicted RBP26.56■■□□□ 1.84
HDAC7-208ENST00000425451 RPGRIP1LQ68CZ1 1315 aa26.56■■□□□ 1.84
HDAC7-208ENST00000425451 PRAG1Q86YV5 1406 aa26.56■■□□□ 1.84
HDAC7-208ENST00000425451 SLC4A1APQ9BWU0 796 aaKnown RBP26.54■■□□□ 1.84
HDAC7-208ENST00000425451 LAMC1P11047 1609 aa26.54■■□□□ 1.84
HDAC7-208ENST00000425451 ORAI2Q96SN7 254 aa26.53■■□□□ 1.84
HDAC7-208ENST00000425451 C8orf37Q96NL8 207 aa26.51■■□□□ 1.83
HDAC7-208ENST00000425451 SOS2Q07890 1332 aaPredicted RBP26.5■■□□□ 1.83
HDAC7-208ENST00000425451 PPLO60437 1756 aa26.5■■□□□ 1.83
HDAC7-208ENST00000425451 QTRT2Q9H974 415 aaKnown RBP26.48■■□□□ 1.83
HDAC7-208ENST00000425451 FOXD1Q16676 465 aa26.46■■□□□ 1.83
HDAC7-208ENST00000425451 ADAMTS2O95450 1211 aa26.45■■□□□ 1.82
HDAC7-208ENST00000425451 RBM6P78332 1123 aaKnown RBP26.45■■□□□ 1.82
HDAC7-208ENST00000425451 RGS12O14924 1447 aa26.44■■□□□ 1.82
HDAC7-208ENST00000425451 NGLY1Q96IV0 654 aa26.43■■□□□ 1.82
HDAC7-208ENST00000425451 ADGRF5Q8IZF2 1346 aa26.41■■□□□ 1.82
HDAC7-208ENST00000425451 SPATA31E1Q6ZUB1 1445 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms