RNA–Protein interactions for RNA: ENST00000425049.1

SHANK2-207, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 4

Gene SHANK2, Length 557 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-207ENST00000425049 SLC26A8Q96RN1 970 aa24.98■■□□□ 1.59
SHANK2-207ENST00000425049 ZFYVE9O95405 1425 aa24.97■■□□□ 1.59
SHANK2-207ENST00000425049 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.97■■□□□ 1.59
SHANK2-207ENST00000425049 HFM1A2PYH4 1435 aa24.96■■□□□ 1.59
SHANK2-207ENST00000425049 MYO5BQ9ULV0 1848 aa24.96■■□□□ 1.59
SHANK2-207ENST00000425049 PLEKHG1Q9ULL1 1385 aa24.95■■□□□ 1.59
SHANK2-207ENST00000425049 SENP3Q9H4L4 574 aaPredicted RBP24.94■■□□□ 1.58
SHANK2-207ENST00000425049 KCNA6P17658 529 aa24.93■■□□□ 1.58
SHANK2-207ENST00000425049 TRIM52Q96A61 297 aa24.93■■□□□ 1.58
SHANK2-207ENST00000425049 SPHKAPQ2M3C7 1700 aa24.92■■□□□ 1.58
SHANK2-207ENST00000425049 DISP3Q9P2K9 1392 aa24.92■■□□□ 1.58
SHANK2-207ENST00000425049 HSPA1LP34931 641 aa24.88■■□□□ 1.57
SHANK2-207ENST00000425049 NUTM2DQ5VT03 806 aaPredicted RBP24.88■■□□□ 1.57
SHANK2-207ENST00000425049 NKTRP30414 1462 aaKnown RBP24.88■■□□□ 1.57
SHANK2-207ENST00000425049 PROSER2Q86WR7 435 aaPredicted RBP24.87■■□□□ 1.57
SHANK2-207ENST00000425049 TMEM94Q12767 1356 aa24.87■■□□□ 1.57
SHANK2-207ENST00000425049 NWD1Q149M9 1564 aa24.86■■□□□ 1.57
SHANK2-207ENST00000425049 ZNF326Q5BKZ1 582 aaKnown RBP24.86■■□□□ 1.57
SHANK2-207ENST00000425049 ALKQ9UM73 1620 aa24.85■■□□□ 1.57
SHANK2-207ENST00000425049 TRPM2O94759 1503 aa24.85■■□□□ 1.57
SHANK2-207ENST00000425049 SLC4A1APQ9BWU0 796 aaKnown RBP24.83■■□□□ 1.57
SHANK2-207ENST00000425049 TBX22Q9Y458 520 aa24.83■■□□□ 1.57
SHANK2-207ENST00000425049 DIP2AQ14689 1571 aa24.83■■□□□ 1.57
SHANK2-207ENST00000425049 XIRP1Q702N8 1843 aaKnown RBP24.8■■□□□ 1.56
SHANK2-207ENST00000425049 CLTCL1P53675 1640 aa24.79■■□□□ 1.56
SHANK2-207ENST00000425049 ADAMTS13Q76LX8 1427 aa24.78■■□□□ 1.56
SHANK2-207ENST00000425049 RBM33Q96EV2 1170 aaKnown RBP24.78■■□□□ 1.56
SHANK2-207ENST00000425049 MSH6P52701 1360 aa24.78■■□□□ 1.56
SHANK2-207ENST00000425049 PIK3R4Q99570 1358 aa24.77■■□□□ 1.56
SHANK2-207ENST00000425049 CHD2O14647 1828 aaKnown RBP24.75■■□□□ 1.55
SHANK2-207ENST00000425049 C14orf37Q86TY3 774 aa24.74■■□□□ 1.55
SHANK2-207ENST00000425049 KIF1BO60333 1816 aa24.73■■□□□ 1.55
SHANK2-207ENST00000425049 SETBP1Q9Y6X0 1596 aa24.71■■□□□ 1.55
SHANK2-207ENST00000425049 NEXMIFQ5QGS0 1516 aa24.7■■□□□ 1.54
SHANK2-207ENST00000425049 FAM135BQ49AJ0 1406 aa24.69■■□□□ 1.54
SHANK2-207ENST00000425049 ACIN1Q9UKV3 1341 aaKnown RBP24.69■■□□□ 1.54
SHANK2-207ENST00000425049 NCOA3Q9Y6Q9 1424 aa24.69■■□□□ 1.54
SHANK2-207ENST00000425049 AMOTL2Q9Y2J4 779 aa24.67■■□□□ 1.54
SHANK2-207ENST00000425049 NRXN3Q9Y4C0 1643 aa24.66■■□□□ 1.54
SHANK2-207ENST00000425049 MED1Q15648 1581 aaPredicted RBP24.66■■□□□ 1.54
SHANK2-207ENST00000425049 FOXD1Q16676 465 aa24.65■■□□□ 1.54
SHANK2-207ENST00000425049 CCDC144AA2RUR9 1427 aa24.64■■□□□ 1.54
SHANK2-207ENST00000425049 VGFO15240 615 aaPredicted RBP24.64■■□□□ 1.54
SHANK2-207ENST00000425049 MPHOSPH9Q99550 1183 aa24.64■■□□□ 1.54
SHANK2-207ENST00000425049 SETD5Q9C0A6 1442 aa24.63■■□□□ 1.53
SHANK2-207ENST00000425049 ROBO1Q9Y6N7 1651 aa24.62■■□□□ 1.53
SHANK2-207ENST00000425049 RPGRIP1LQ68CZ1 1315 aa24.62■■□□□ 1.53
SHANK2-207ENST00000425049 PTPRUQ92729 1446 aa24.62■■□□□ 1.53
SHANK2-207ENST00000425049 SLAIN2Q9P270 581 aa24.62■■□□□ 1.53
SHANK2-207ENST00000425049 ATF3P18847 181 aa24.61■■□□□ 1.53
SHANK2-207ENST00000425049 ILDR2Q71H61 639 aa24.61■■□□□ 1.53
SHANK2-207ENST00000425049 CADPS2Q86UW7 1296 aa24.6■■□□□ 1.53
SHANK2-207ENST00000425049 PHF23Q9BUL5 403 aaPredicted RBP24.6■■□□□ 1.53
SHANK2-207ENST00000425049 C19orf44Q9H6X5 657 aa24.6■■□□□ 1.53
SHANK2-207ENST00000425049 METP08581 1390 aa24.59■■□□□ 1.53
SHANK2-207ENST00000425049 XRN1Q8IZH2 1706 aaKnown RBP24.59■■□□□ 1.53
SHANK2-207ENST00000425049 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.55■■□□□ 1.52
SHANK2-207ENST00000425049 RAB3GAP2Q9H2M9 1393 aa24.54■■□□□ 1.52
SHANK2-207ENST00000425049 DCCP43146 1447 aa24.52■■□□□ 1.52
SHANK2-207ENST00000425049 PPLO60437 1756 aa24.52■■□□□ 1.52
SHANK2-207ENST00000425049 RGL3Q3MIN7 710 aa24.52■■□□□ 1.52
SHANK2-207ENST00000425049 ANKRD30BQ9BXX2 1392 aa24.49■■□□□ 1.51
SHANK2-207ENST00000425049 SPATA31E1Q6ZUB1 1445 aa24.49■■□□□ 1.51
SHANK2-207ENST00000425049 PHLPP1O60346 1717 aa24.49■■□□□ 1.51
SHANK2-207ENST00000425049 PTCH1Q13635 1447 aa24.47■■□□□ 1.51
SHANK2-207ENST00000425049 ADGRL3Q9HAR2 1447 aa24.47■■□□□ 1.51
SHANK2-207ENST00000425049 SOCS7O14512 581 aa24.47■■□□□ 1.51
SHANK2-207ENST00000425049 SETD1AO15047 1707 aaKnown RBP24.45■■□□□ 1.5
SHANK2-207ENST00000425049 JCADQ9P266 1359 aa24.43■■□□□ 1.5
SHANK2-207ENST00000425049 ADGRF5Q8IZF2 1346 aa24.43■■□□□ 1.5
SHANK2-207ENST00000425049 MST1RQ04912 1400 aa24.41■■□□□ 1.5
SHANK2-207ENST00000425049 ROBO2Q9HCK4 1378 aa24.41■■□□□ 1.5
SHANK2-207ENST00000425049 AHDC1Q5TGY3 1603 aaPredicted RBP24.4■■□□□ 1.5
SHANK2-207ENST00000425049 BRINP3Q76B58 766 aa24.4■■□□□ 1.5
SHANK2-207ENST00000425049 PRAG1Q86YV5 1406 aa24.4■■□□□ 1.5
SHANK2-207ENST00000425049 NALCNQ8IZF0 1738 aa24.4■■□□□ 1.5
SHANK2-207ENST00000425049 COL16A1Q07092 1604 aaPredicted RBP24.39■■□□□ 1.5
SHANK2-207ENST00000425049 IFT172Q9UG01 1749 aa24.39■■□□□ 1.5
SHANK2-207ENST00000425049 ASXL1Q8IXJ9 1541 aa24.38■■□□□ 1.49
SHANK2-207ENST00000425049 PIK3C2GO75747 1445 aa24.36■■□□□ 1.49
SHANK2-207ENST00000425049 HRCP23327 699 aa24.35■■□□□ 1.49
SHANK2-207ENST00000425049 STK26Q9P289 416 aa24.34■■□□□ 1.49
SHANK2-207ENST00000425049 LRPPRCP42704 1394 aaKnown RBP24.32■■□□□ 1.48
SHANK2-207ENST00000425049 SPATA31A6Q5VVP1 1343 aa24.32■■□□□ 1.48
SHANK2-207ENST00000425049 MYOM2P54296 1465 aa24.32■■□□□ 1.48
SHANK2-207ENST00000425049 C1orf167Q5SNV9 1468 aa24.3■■□□□ 1.48
SHANK2-207ENST00000425049 TECPR2O15040 1411 aa24.29■■□□□ 1.48
SHANK2-207ENST00000425049 MEX3CQ5U5Q3 659 aaKnown RBP24.29■■□□□ 1.48
SHANK2-207ENST00000425049 TMEM132EQ6IEE7 984 aa24.28■■□□□ 1.48
SHANK2-207ENST00000425049 LAMC1P11047 1609 aa24.27■■□□□ 1.48
SHANK2-207ENST00000425049 NHSL1Q5SYE7 1610 aa24.27■■□□□ 1.48
SHANK2-207ENST00000425049 SHPRHQ149N8 1683 aa24.27■■□□□ 1.48
SHANK2-207ENST00000425049 ABCC11Q96J66 1382 aa24.27■■□□□ 1.48
SHANK2-207ENST00000425049 YTHDC2Q9H6S0 1430 aaKnown RBP24.27■■□□□ 1.48
SHANK2-207ENST00000425049 NRXN1Q9ULB1 1477 aa24.26■■□□□ 1.47
SHANK2-207ENST00000425049 RGS17Q9UGC6 210 aaPredicted RBP24.26■■□□□ 1.47
SHANK2-207ENST00000425049 CDC42BPGQ6DT37 1551 aa24.25■■□□□ 1.47
SHANK2-207ENST00000425049 KNDC1Q76NI1 1749 aa24.25■■□□□ 1.47
SHANK2-207ENST00000425049 LRRC59Q96AG4 307 aaKnown RBP24.25■■□□□ 1.47
SHANK2-207ENST00000425049 C14orf93Q9H972 538 aaKnown RBP24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms