RNA–Protein interactions for RNA: ENST00000424953.1

LINC02238-201, Transcript of long intergenic non-protein coding RNA 2238, humanhuman

TSL 5 BASIC

Gene LINC02238, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02238-201ENST00000424953 THSD4Q6ZMP0 1018 aa10.32□□□□□ -0.76
LINC02238-201ENST00000424953 LRCH3Q96II8 777 aa10.32□□□□□ -0.76
LINC02238-201ENST00000424953 TMEM134Q9H6X4 195 aa10.32□□□□□ -0.76
LINC02238-201ENST00000424953 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.32□□□□□ -0.76
LINC02238-201ENST00000424953 SOWAHBA6NEL2 793 aa10.31□□□□□ -0.76
LINC02238-201ENST00000424953 AK7Q96M32 723 aa10.31□□□□□ -0.76
LINC02238-201ENST00000424953 TRIM66O15016 1216 aa10.28□□□□□ -0.76
LINC02238-201ENST00000424953 RNF40O75150 1001 aa10.28□□□□□ -0.76
LINC02238-201ENST00000424953 PRKCSHP14314 528 aaPredicted RBP10.28□□□□□ -0.76
LINC02238-201ENST00000424953 HPS5Q9UPZ3 1129 aa10.27□□□□□ -0.77
LINC02238-201ENST00000424953 MDM2Q00987 491 aaPredicted RBP10.26□□□□□ -0.77
LINC02238-201ENST00000424953 SLF2Q8IX21 1173 aa10.26□□□□□ -0.77
LINC02238-201ENST00000424953 DAXXQ9UER7 740 aaPredicted RBP10.26□□□□□ -0.77
LINC02238-201ENST00000424953 TSR3Q9UJK0 312 aaKnown RBP10.25□□□□□ -0.77
LINC02238-201ENST00000424953 SLC4A3P48751 1232 aa10.24□□□□□ -0.77
LINC02238-201ENST00000424953 WBP1LQ9NX94 342 aa10.24□□□□□ -0.77
LINC02238-201ENST00000424953 PPP4CP60510 307 aa10.23□□□□□ -0.77
LINC02238-201ENST00000424953 AMHR2Q16671 573 aa10.23□□□□□ -0.77
LINC02238-201ENST00000424953 CLCN1P35523 988 aa10.22□□□□□ -0.77
LINC02238-201ENST00000424953 REPIN1Q9BWE0 567 aaKnown RBP10.22□□□□□ -0.77
LINC02238-201ENST00000424953 GPCPD1Q9NPB8 672 aa10.22□□□□□ -0.77
LINC02238-201ENST00000424953 DDX11L8A8MPP1 907 aa10.21□□□□□ -0.77
LINC02238-201ENST00000424953 PDE4DQ08499 809 aa10.21□□□□□ -0.77
LINC02238-201ENST00000424953 TTLL12Q14166 644 aaPredicted RBP10.21□□□□□ -0.77
LINC02238-201ENST00000424953 TMUB1Q9BVT8 246 aa10.21□□□□□ -0.77
LINC02238-201ENST00000424953 SLC10A3P09131 477 aa10.2□□□□□ -0.78
LINC02238-201ENST00000424953 IFFO2Q5TF58 517 aa10.2□□□□□ -0.78
LINC02238-201ENST00000424953 PARP9Q8IXQ6 854 aa10.19□□□□□ -0.78
LINC02238-201ENST00000424953 SULF1Q8IWU6 871 aa10.18□□□□□ -0.78
LINC02238-201ENST00000424953 RDH13Q8NBN7 331 aa10.18□□□□□ -0.78
LINC02238-201ENST00000424953 NECTIN2Q92692 538 aa10.18□□□□□ -0.78
LINC02238-201ENST00000424953 GIGYF2Q6Y7W6 1299 aaKnown RBP10.17□□□□□ -0.78
LINC02238-201ENST00000424953 FAM217BQ9NTX9 383 aaPredicted RBP10.17□□□□□ -0.78
LINC02238-201ENST00000424953 RSPH4AQ5TD94 716 aa10.16□□□□□ -0.78
LINC02238-201ENST00000424953 CFHP08603 1231 aa10.15□□□□□ -0.78
LINC02238-201ENST00000424953 APLP1P51693 650 aa10.15□□□□□ -0.78
LINC02238-201ENST00000424953 NYAP1Q6ZVC0 841 aa10.15□□□□□ -0.78
LINC02238-201ENST00000424953 RGS20O76081 388 aa10.14□□□□□ -0.79
LINC02238-201ENST00000424953 CD46P15529 392 aa10.14□□□□□ -0.79
LINC02238-201ENST00000424953 SSTR3P32745 418 aaPredicted RBP10.14□□□□□ -0.79
LINC02238-201ENST00000424953 KMT5BQ4FZB7 885 aa10.12□□□□□ -0.79
LINC02238-201ENST00000424953 GCGRP47871 477 aa10.11□□□□□ -0.79
LINC02238-201ENST00000424953 PRR14Q9BWN1 585 aa10.11□□□□□ -0.79
LINC02238-201ENST00000424953 GPBP1L1Q9HC44 474 aaPredicted RBP10.11□□□□□ -0.79
LINC02238-201ENST00000424953 A0A0G2JS52 829 aa10.1□□□□□ -0.79
LINC02238-201ENST00000424953 ACTN4O43707 911 aaKnown RBP10.1□□□□□ -0.79
LINC02238-201ENST00000424953 MS4A1P11836 297 aa10.1□□□□□ -0.79
LINC02238-201ENST00000424953 KDM4CQ9H3R0 1056 aa10.08□□□□□ -0.8
LINC02238-201ENST00000424953 NEUROD2Q15784 382 aa10.07□□□□□ -0.8
LINC02238-201ENST00000424953 PCDHB3Q9Y5E6 796 aa10.07□□□□□ -0.8
LINC02238-201ENST00000424953 ITGBL1O95965 494 aaPredicted RBP10.06□□□□□ -0.8
LINC02238-201ENST00000424953 FUT2Q10981 343 aa10.06□□□□□ -0.8
LINC02238-201ENST00000424953 BEGAINQ9BUH8 593 aa10.06□□□□□ -0.8
LINC02238-201ENST00000424953 KDM4AO75164 1064 aa10.05□□□□□ -0.8
LINC02238-201ENST00000424953 BRPF1P55201 1214 aaPredicted RBP10.05□□□□□ -0.8
LINC02238-201ENST00000424953 COPS2P61201 443 aa10.05□□□□□ -0.8
LINC02238-201ENST00000424953 MTRQ99707 1265 aa10.05□□□□□ -0.8
LINC02238-201ENST00000424953 PUS10Q3MIT2 529 aaKnown RBP10.04□□□□□ -0.8
LINC02238-201ENST00000424953 TJAP1Q5JTD0 557 aa10.04□□□□□ -0.8
LINC02238-201ENST00000424953 BLOC1S3Q6QNY0 202 aa10.04□□□□□ -0.8
LINC02238-201ENST00000424953 NUTM1Q86Y26 1132 aa10.03□□□□□ -0.8
LINC02238-201ENST00000424953 ATP6V1AP38606 617 aa10.02□□□□□ -0.81
LINC02238-201ENST00000424953 KCNC4Q03721 635 aa10.02□□□□□ -0.81
LINC02238-201ENST00000424953 SPIRE2Q8WWL2 714 aa10.01□□□□□ -0.81
LINC02238-201ENST00000424953 IL21Q9HBE4 155 aa10.01□□□□□ -0.81
LINC02238-201ENST00000424953 MORN1Q5T089 497 aa10□□□□□ -0.81
LINC02238-201ENST00000424953 ZNF516Q92618 1163 aa10□□□□□ -0.81
LINC02238-201ENST00000424953 IRX2Q9BZI1 471 aaPredicted RBP10□□□□□ -0.81
LINC02238-201ENST00000424953 FAM117AQ9C073 453 aa10□□□□□ -0.81
LINC02238-201ENST00000424953 HOXA2O43364 376 aa9.99□□□□□ -0.81
LINC02238-201ENST00000424953 USP46P62068 366 aa9.99□□□□□ -0.81
LINC02238-201ENST00000424953 GRIPAP1Q4V328 841 aa9.99□□□□□ -0.81
LINC02238-201ENST00000424953 HLA-CQ95604 372 aa9.99□□□□□ -0.81
LINC02238-201ENST00000424953 TBC1D2Q9BYX2 928 aa9.99□□□□□ -0.81
LINC02238-201ENST00000424953 ZPR1O75312 459 aa9.97□□□□□ -0.81
LINC02238-201ENST00000424953 NR1I2O75469 434 aa9.97□□□□□ -0.81
LINC02238-201ENST00000424953 SCUBE3Q8IX30 993 aa9.97□□□□□ -0.81
LINC02238-201ENST00000424953 SLC27A5Q9Y2P5 690 aa9.97□□□□□ -0.81
LINC02238-201ENST00000424953 GUCA2AQ02747 115 aa9.96□□□□□ -0.82
LINC02238-201ENST00000424953 DDRGK1Q96HY6 314 aa9.96□□□□□ -0.82
LINC02238-201ENST00000424953 PLEKHG3A1L390 1219 aa9.95□□□□□ -0.82
LINC02238-201ENST00000424953 MOXD2PA6NHM9 499 aa9.95□□□□□ -0.82
LINC02238-201ENST00000424953 NDUFV2P19404 249 aa9.95□□□□□ -0.82
LINC02238-201ENST00000424953 DIXDC1Q155Q3 683 aa9.95□□□□□ -0.82
LINC02238-201ENST00000424953 TLL1O43897 1013 aa9.94□□□□□ -0.82
LINC02238-201ENST00000424953 NKX2-3Q8TAU0 364 aa9.94□□□□□ -0.82
LINC02238-201ENST00000424953 MYSM1Q5VVJ2 828 aa9.93□□□□□ -0.82
LINC02238-201ENST00000424953 IL27Q8NEV9 243 aa9.93□□□□□ -0.82
LINC02238-201ENST00000424953 FDX1P10109 184 aa9.92□□□□□ -0.82
LINC02238-201ENST00000424953 RSBN1LQ6PCB5 846 aaPredicted RBP9.91□□□□□ -0.82
LINC02238-201ENST00000424953 RNF19BQ6ZMZ0 732 aa9.91□□□□□ -0.82
LINC02238-201ENST00000424953 THAP11Q96EK4 314 aa9.91□□□□□ -0.82
LINC02238-201ENST00000424953 PCDHGC3Q9UN70 934 aa9.91□□□□□ -0.82
LINC02238-201ENST00000424953 BRICD5Q6PL45 260 aa9.9□□□□□ -0.82
LINC02238-201ENST00000424953 RIC3Q7Z5B4 369 aa9.9□□□□□ -0.82
LINC02238-201ENST00000424953 RSPH6AQ9H0K4 717 aa9.9□□□□□ -0.82
LINC02238-201ENST00000424953 SPTLC1O15269 473 aa9.89□□□□□ -0.83
LINC02238-201ENST00000424953 FMNL1O95466 1100 aaPredicted RBP9.89□□□□□ -0.83
LINC02238-201ENST00000424953 ADH1BP00325 375 aa9.89□□□□□ -0.83
LINC02238-201ENST00000424953 Q3C1V9 767 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms