RNA–Protein interactions for RNA: ENST00000424830.6

PUDP-203, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 3 BASIC

Gene PUDP, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-203ENST00000424830 RPRD2Q5VT52 1461 aaKnown RBP25.14■■□□□ 1.61
PUDP-203ENST00000424830 MSH6P52701 1360 aa25.13■■□□□ 1.61
PUDP-203ENST00000424830 RBM33Q96EV2 1170 aaKnown RBP25.12■■□□□ 1.61
PUDP-203ENST00000424830 ANKRD50Q9ULJ7 1429 aa25.09■■□□□ 1.61
PUDP-203ENST00000424830 PPP1R15AO75807 674 aaPredicted RBP25.08■■□□□ 1.6
PUDP-203ENST00000424830 MYO5BQ9ULV0 1848 aa25.07■■□□□ 1.6
PUDP-203ENST00000424830 HDGFP51858 240 aaKnown RBP25.07■■□□□ 1.6
PUDP-203ENST00000424830 GCC2Q8IWJ2 1684 aa25.07■■□□□ 1.6
PUDP-203ENST00000424830 PLEKHG1Q9ULL1 1385 aa25.06■■□□□ 1.6
PUDP-203ENST00000424830 FAM50AQ14320 339 aaKnown RBP25.06■■□□□ 1.6
PUDP-203ENST00000424830 PHLPP1O60346 1717 aa25.06■■□□□ 1.6
PUDP-203ENST00000424830 ZFYVE9O95405 1425 aa25.05■■□□□ 1.6
PUDP-203ENST00000424830 CHD2O14647 1828 aaKnown RBP25.05■■□□□ 1.6
PUDP-203ENST00000424830 POTEAQ6S8J7 498 aa25.05■■□□□ 1.6
PUDP-203ENST00000424830 SLAIN2Q9P270 581 aa25.05■■□□□ 1.6
PUDP-203ENST00000424830 RIMS2Q9UQ26 1411 aa25.04■■□□□ 1.6
PUDP-203ENST00000424830 TMEM131LA2VDJ0 1609 aa25.02■■□□□ 1.6
PUDP-203ENST00000424830 JCADQ9P266 1359 aa25.01■■□□□ 1.59
PUDP-203ENST00000424830 UNC13BO14795 1591 aa24.97■■□□□ 1.59
PUDP-203ENST00000424830 C14orf37Q86TY3 774 aa24.97■■□□□ 1.59
PUDP-203ENST00000424830 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.97■■□□□ 1.59
PUDP-203ENST00000424830 TBX22Q9Y458 520 aa24.97■■□□□ 1.59
PUDP-203ENST00000424830 NCOA3Q9Y6Q9 1424 aa24.97■■□□□ 1.59
PUDP-203ENST00000424830 CHGAP10645 457 aaKnown RBP24.95■■□□□ 1.58
PUDP-203ENST00000424830 COL16A1Q07092 1604 aaPredicted RBP24.95■■□□□ 1.58
PUDP-203ENST00000424830 DIP2AQ14689 1571 aa24.94■■□□□ 1.58
PUDP-203ENST00000424830 E9PCH4 1651 aa24.93■■□□□ 1.58
PUDP-203ENST00000424830 SETD1AO15047 1707 aaKnown RBP24.91■■□□□ 1.58
PUDP-203ENST00000424830 PIK3R4Q99570 1358 aa24.9■■□□□ 1.58
PUDP-203ENST00000424830 CADPS2Q86UW7 1296 aa24.9■■□□□ 1.58
PUDP-203ENST00000424830 ADAMTS13Q76LX8 1427 aa24.9■■□□□ 1.58
PUDP-203ENST00000424830 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.89■■□□□ 1.58
PUDP-203ENST00000424830 SPATA31A6Q5VVP1 1343 aa24.89■■□□□ 1.57
PUDP-203ENST00000424830 IQGAP3Q86VI3 1631 aa24.89■■□□□ 1.57
PUDP-203ENST00000424830 ATF3P18847 181 aa24.88■■□□□ 1.57
PUDP-203ENST00000424830 NUTM2DQ5VT03 806 aaPredicted RBP24.87■■□□□ 1.57
PUDP-203ENST00000424830 C19orf44Q9H6X5 657 aa24.87■■□□□ 1.57
PUDP-203ENST00000424830 TRPM2O94759 1503 aa24.87■■□□□ 1.57
PUDP-203ENST00000424830 MEX3CQ5U5Q3 659 aaKnown RBP24.86■■□□□ 1.57
PUDP-203ENST00000424830 AHDC1Q5TGY3 1603 aaPredicted RBP24.86■■□□□ 1.57
PUDP-203ENST00000424830 ROCK1Q13464 1354 aa24.85■■□□□ 1.57
PUDP-203ENST00000424830 LRP6O75581 1613 aa24.84■■□□□ 1.57
PUDP-203ENST00000424830 SHPRHQ149N8 1683 aa24.84■■□□□ 1.57
PUDP-203ENST00000424830 ZNF772Q68DY9 489 aaPredicted RBP24.83■■□□□ 1.56
PUDP-203ENST00000424830 AMOTL2Q9Y2J4 779 aa24.8■■□□□ 1.56
PUDP-203ENST00000424830 NUP155O75694 1391 aa24.8■■□□□ 1.56
PUDP-203ENST00000424830 DCCP43146 1447 aa24.77■■□□□ 1.56
PUDP-203ENST00000424830 PTPRUQ92729 1446 aa24.75■■□□□ 1.55
PUDP-203ENST00000424830 BRINP3Q76B58 766 aa24.75■■□□□ 1.55
PUDP-203ENST00000424830 XRN1Q8IZH2 1706 aaKnown RBP24.74■■□□□ 1.55
PUDP-203ENST00000424830 TRIM52Q96A61 297 aa24.73■■□□□ 1.55
PUDP-203ENST00000424830 NRXN3Q9Y4C0 1643 aa24.73■■□□□ 1.55
PUDP-203ENST00000424830 SETBP1Q9Y6X0 1596 aa24.72■■□□□ 1.55
PUDP-203ENST00000424830 ASXL1Q8IXJ9 1541 aa24.72■■□□□ 1.55
PUDP-203ENST00000424830 SPHKAPQ2M3C7 1700 aa24.72■■□□□ 1.55
PUDP-203ENST00000424830 ITGAEP38570 1179 aa24.7■■□□□ 1.54
PUDP-203ENST00000424830 NUTM2BA6NNL0 878 aaPredicted RBP24.69■■□□□ 1.54
PUDP-203ENST00000424830 NUTM2EB1AL46 878 aaPredicted RBP24.69■■□□□ 1.54
PUDP-203ENST00000424830 RXRBP28702 533 aa24.69■■□□□ 1.54
PUDP-203ENST00000424830 ZNF326Q5BKZ1 582 aaKnown RBP24.69■■□□□ 1.54
PUDP-203ENST00000424830 NUTM2AQ8IVF1 878 aaPredicted RBP24.69■■□□□ 1.54
PUDP-203ENST00000424830 MST1RQ04912 1400 aa24.68■■□□□ 1.54
PUDP-203ENST00000424830 NHSL1Q5SYE7 1610 aa24.67■■□□□ 1.54
PUDP-203ENST00000424830 UPF1Q92900 1129 aaKnown RBP eCLIP24.67■■□□□ 1.54
PUDP-203ENST00000424830 SETD5Q9C0A6 1442 aa24.67■■□□□ 1.54
PUDP-203ENST00000424830 CDK12Q9NYV4 1490 aaPredicted RBP24.65■■□□□ 1.54
PUDP-203ENST00000424830 METP08581 1390 aa24.64■■□□□ 1.53
PUDP-203ENST00000424830 LRRC59Q96AG4 307 aaKnown RBP24.63■■□□□ 1.53
PUDP-203ENST00000424830 ADGRL3Q9HAR2 1447 aa24.62■■□□□ 1.53
PUDP-203ENST00000424830 AFF2P51816 1311 aa24.62■■□□□ 1.53
PUDP-203ENST00000424830 NALCNQ8IZF0 1738 aa24.59■■□□□ 1.53
PUDP-203ENST00000424830 NEXMIFQ5QGS0 1516 aa24.59■■□□□ 1.53
PUDP-203ENST00000424830 CLTCL1P53675 1640 aa24.58■■□□□ 1.52
PUDP-203ENST00000424830 KIF1BO60333 1816 aa24.56■■□□□ 1.52
PUDP-203ENST00000424830 C8orf37Q96NL8 207 aa24.56■■□□□ 1.52
PUDP-203ENST00000424830 PNPLA6Q8IY17 1366 aa24.56■■□□□ 1.52
PUDP-203ENST00000424830 DDX17Q92841 729 aaKnown RBP24.54■■□□□ 1.52
PUDP-203ENST00000424830 PTCH1Q13635 1447 aa24.51■■□□□ 1.51
PUDP-203ENST00000424830 RBM6P78332 1123 aaKnown RBP24.51■■□□□ 1.51
PUDP-203ENST00000424830 QTRT2Q9H974 415 aaKnown RBP24.51■■□□□ 1.51
PUDP-203ENST00000424830 C1orf167Q5SNV9 1468 aa24.5■■□□□ 1.51
PUDP-203ENST00000424830 RGS12O14924 1447 aa24.5■■□□□ 1.51
PUDP-203ENST00000424830 PPARGC1BQ86YN6 1023 aaKnown RBP24.49■■□□□ 1.51
PUDP-203ENST00000424830 LAMC1P11047 1609 aa24.48■■□□□ 1.51
PUDP-203ENST00000424830 NGLY1Q96IV0 654 aa24.47■■□□□ 1.51
PUDP-203ENST00000424830 VGFO15240 615 aaPredicted RBP24.46■■□□□ 1.51
PUDP-203ENST00000424830 ADAMTS2O95450 1211 aa24.46■■□□□ 1.51
PUDP-203ENST00000424830 ROBO2Q9HCK4 1378 aa24.43■■□□□ 1.5
PUDP-203ENST00000424830 SOS2Q07890 1332 aaPredicted RBP24.43■■□□□ 1.5
PUDP-203ENST00000424830 NAIPQ13075 1403 aa24.43■■□□□ 1.5
PUDP-203ENST00000424830 PRAG1Q86YV5 1406 aa24.42■■□□□ 1.5
PUDP-203ENST00000424830 ORAI2Q96SN7 254 aa24.41■■□□□ 1.5
PUDP-203ENST00000424830 HFM1A2PYH4 1435 aa24.4■■□□□ 1.5
PUDP-203ENST00000424830 RPGRIP1LQ68CZ1 1315 aa24.4■■□□□ 1.5
PUDP-203ENST00000424830 USP21Q9UK80 565 aa24.38■■□□□ 1.49
PUDP-203ENST00000424830 RRBP1Q9P2E9 1410 aaKnown RBP24.38■■□□□ 1.49
PUDP-203ENST00000424830 ATAD2Q6PL18 1390 aa24.38■■□□□ 1.49
PUDP-203ENST00000424830 TRPC5Q9UL62 973 aaPredicted RBP24.37■■□□□ 1.49
PUDP-203ENST00000424830 PPLO60437 1756 aa24.37■■□□□ 1.49
PUDP-203ENST00000424830 COL22A1Q8NFW1 1626 aaPredicted RBP24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms