RNA–Protein interactions for RNA: ENST00000420886.6

SBNO1-202, Transcript of strawberry notch homolog 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SBNO1, Length 10,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1-202ENST00000420886 TOP2AP11388 1531 aaKnown RBP7.84□□□□□ -1.15
SBNO1-202ENST00000420886 UTP14CQ5TAP6 766 aaKnown RBP7.84□□□□□ -1.15
SBNO1-202ENST00000420886 TPM1P09493 284 aa7.84□□□□□ -1.15
SBNO1-202ENST00000420886 SSR1P43307 286 aaKnown RBP7.84□□□□□ -1.15
SBNO1-202ENST00000420886 CCAR2Q8N163 923 aaKnown RBP7.83□□□□□ -1.16
SBNO1-202ENST00000420886 CWC22Q9HCG8 908 aaKnown RBP7.83□□□□□ -1.16
SBNO1-202ENST00000420886 KANK4Q5T7N3 995 aaPredicted RBP7.83□□□□□ -1.16
SBNO1-202ENST00000420886 TXLNBQ8N3L3 684 aa7.83□□□□□ -1.16
SBNO1-202ENST00000420886 EIF3JO75822 258 aaKnown RBP7.83□□□□□ -1.16
SBNO1-202ENST00000420886 FEZ1Q99689 392 aa7.83□□□□□ -1.16
SBNO1-202ENST00000420886 CUX1P39880 1505 aa7.83□□□□□ -1.16
SBNO1-202ENST00000420886 HSP90B1P14625 803 aaKnown RBP7.83□□□□□ -1.16
SBNO1-202ENST00000420886 DMTNQ08495 405 aa7.83□□□□□ -1.16
SBNO1-202ENST00000420886 HOMEZQ8IX15 550 aa7.82□□□□□ -1.16
SBNO1-202ENST00000420886 RRAGDQ9NQL2 400 aaPredicted RBP7.82□□□□□ -1.16
SBNO1-202ENST00000420886 CLUAP1Q96AJ1 413 aa7.82□□□□□ -1.16
SBNO1-202ENST00000420886 HMGB1P09429 215 aaKnown RBP7.82□□□□□ -1.16
SBNO1-202ENST00000420886 KRT222Q8N1A0 295 aa7.82□□□□□ -1.16
SBNO1-202ENST00000420886 XPCQ01831 940 aaPredicted RBP7.82□□□□□ -1.16
SBNO1-202ENST00000420886 USP47Q96K76 1375 aa7.82□□□□□ -1.16
SBNO1-202ENST00000420886 VIRMAQ69YN4 1812 aaKnown RBP7.82□□□□□ -1.16
SBNO1-202ENST00000420886 UACAQ9BZF9 1416 aa7.82□□□□□ -1.16
SBNO1-202ENST00000420886 CCDC191Q8NCU4 936 aa7.81□□□□□ -1.16
SBNO1-202ENST00000420886 PEG3Q9GZU2 1588 aa7.81□□□□□ -1.16
SBNO1-202ENST00000420886 KIF2AO00139 706 aaPredicted RBP7.81□□□□□ -1.16
SBNO1-202ENST00000420886 KIAA0754O94854 1291 aa7.81□□□□□ -1.16
SBNO1-202ENST00000420886 CCDC34Q96HJ3 373 aa7.81□□□□□ -1.16
SBNO1-202ENST00000420886 NAT10Q9H0A0 1025 aaKnown RBP7.81□□□□□ -1.16
SBNO1-202ENST00000420886 CCDC91Q7Z6B0 441 aa7.81□□□□□ -1.16
SBNO1-202ENST00000420886 NOL10Q9BSC4 688 aaKnown RBP7.81□□□□□ -1.16
SBNO1-202ENST00000420886 LMOD3Q0VAK6 560 aa7.81□□□□□ -1.16
SBNO1-202ENST00000420886 RNF214Q8ND24 703 aa7.81□□□□□ -1.16
SBNO1-202ENST00000420886 RUFY1Q96T51 708 aa7.81□□□□□ -1.16
SBNO1-202ENST00000420886 SMC4Q9NTJ3 1288 aa7.8□□□□□ -1.16
SBNO1-202ENST00000420886 HSP90AB3PQ58FF7 597 aa7.8□□□□□ -1.16
SBNO1-202ENST00000420886 DCTN1Q14203 1278 aa7.8□□□□□ -1.16
SBNO1-202ENST00000420886 POLR1AO95602 1720 aaPredicted RBP7.8□□□□□ -1.16
SBNO1-202ENST00000420886 RAPGEF2Q9Y4G8 1499 aa7.8□□□□□ -1.16
SBNO1-202ENST00000420886 TSPY4P0CV99 314 aa7.8□□□□□ -1.16
SBNO1-202ENST00000420886 TSPY10P0CW01 314 aa7.8□□□□□ -1.16
SBNO1-202ENST00000420886 FOXD4L5Q5VV16 416 aaPredicted RBP7.8□□□□□ -1.16
SBNO1-202ENST00000420886 FOXD4L4Q8WXT5 416 aaPredicted RBP7.8□□□□□ -1.16
SBNO1-202ENST00000420886 PAXBP1Q9Y5B6 917 aa7.8□□□□□ -1.16
SBNO1-202ENST00000420886 RBM25P49756 843 aaKnown RBP7.79□□□□□ -1.16
SBNO1-202ENST00000420886 DDX19BQ9UMR2 479 aa7.79□□□□□ -1.16
SBNO1-202ENST00000420886 SPDYE4A6NLX3 237 aa7.79□□□□□ -1.16
SBNO1-202ENST00000420886 IVLP07476 585 aa7.79□□□□□ -1.16
SBNO1-202ENST00000420886 MCM2P49736 904 aa7.79□□□□□ -1.16
SBNO1-202ENST00000420886 OGFRQ9NZT2 677 aa7.79□□□□□ -1.16
SBNO1-202ENST00000420886 ERICH3Q5RHP9 1530 aa7.79□□□□□ -1.16
SBNO1-202ENST00000420886 MPHOSPH9Q99550 1183 aa7.79□□□□□ -1.16
SBNO1-202ENST00000420886 GABPB1Q06547 395 aaPredicted RBP7.79□□□□□ -1.16
SBNO1-202ENST00000420886 K7ELQ4 463 aaPredicted RBP7.78□□□□□ -1.16
SBNO1-202ENST00000420886 SLC26A8Q96RN1 970 aa7.78□□□□□ -1.16
SBNO1-202ENST00000420886 TDO2P48775 406 aa7.78□□□□□ -1.16
SBNO1-202ENST00000420886 SUPT6HQ7KZ85 1726 aaKnown RBP7.78□□□□□ -1.16
SBNO1-202ENST00000420886 PRPF40AO75400 957 aaKnown RBP7.78□□□□□ -1.16
SBNO1-202ENST00000420886 RABEP1Q15276 862 aa7.78□□□□□ -1.16
SBNO1-202ENST00000420886 RBM28Q9NW13 759 aaKnown RBP7.78□□□□□ -1.16
SBNO1-202ENST00000420886 L3MBTL2Q969R5 705 aa7.78□□□□□ -1.16
SBNO1-202ENST00000420886 TRIM5Q9C035 493 aa7.78□□□□□ -1.16
SBNO1-202ENST00000420886 RASSF4Q9H2L5 321 aa7.78□□□□□ -1.16
SBNO1-202ENST00000420886 VGLL3A8MV65 326 aa7.78□□□□□ -1.16
SBNO1-202ENST00000420886 CCDC192P0DO97 292 aa7.78□□□□□ -1.16
SBNO1-202ENST00000420886 ERLIN1O75477 346 aa7.78□□□□□ -1.16
SBNO1-202ENST00000420886 INTS3Q68E01 1043 aaKnown RBP7.78□□□□□ -1.16
SBNO1-202ENST00000420886 KIF7Q2M1P5 1343 aa7.77□□□□□ -1.16
SBNO1-202ENST00000420886 TMCO3Q6UWJ1 677 aa7.77□□□□□ -1.17
SBNO1-202ENST00000420886 HMMRO75330 724 aa7.77□□□□□ -1.17
SBNO1-202ENST00000420886 TRIM6-TRIM34B2RNG4 842 aa7.77□□□□□ -1.17
SBNO1-202ENST00000420886 ZKSCAN2Q63HK3 967 aa7.77□□□□□ -1.17
SBNO1-202ENST00000420886 DCAF11Q8TEB1 546 aa7.77□□□□□ -1.17
SBNO1-202ENST00000420886 TRIM34Q9BYJ4 488 aa7.77□□□□□ -1.17
SBNO1-202ENST00000420886 PANK2Q9BZ23 570 aa7.77□□□□□ -1.17
SBNO1-202ENST00000420886 ZKSCAN5Q9Y2L8 839 aa7.77□□□□□ -1.17
SBNO1-202ENST00000420886 TTLL5Q6EMB2 1281 aa7.76□□□□□ -1.17
SBNO1-202ENST00000420886 CREBRFQ8IUR6 639 aa7.76□□□□□ -1.17
SBNO1-202ENST00000420886 COG6Q9Y2V7 657 aa7.76□□□□□ -1.17
SBNO1-202ENST00000420886 PDE3AQ14432 1141 aa7.76□□□□□ -1.17
SBNO1-202ENST00000420886 ANKRD45Q5TZF3 282 aa7.76□□□□□ -1.17
SBNO1-202ENST00000420886 WWC1Q8IX03 1113 aa7.76□□□□□ -1.17
SBNO1-202ENST00000420886 BMS1Q14692 1282 aaKnown RBP7.76□□□□□ -1.17
SBNO1-202ENST00000420886 TSR1Q2NL82 804 aaKnown RBP7.76□□□□□ -1.17
SBNO1-202ENST00000420886 SPC24Q8NBT2 197 aa7.76□□□□□ -1.17
SBNO1-202ENST00000420886 KIF18AQ8NI77 898 aa7.76□□□□□ -1.17
SBNO1-202ENST00000420886 MROH2BQ7Z745 1585 aa7.75□□□□□ -1.17
SBNO1-202ENST00000420886 BCCIPQ9P287 314 aaKnown RBP eCLIP7.75□□□□□ -1.17
SBNO1-202ENST00000420886 TTC31Q49AM3 519 aaPredicted RBP7.75□□□□□ -1.17
SBNO1-202ENST00000420886 MYCBPQ99417 103 aaPredicted RBP7.75□□□□□ -1.17
SBNO1-202ENST00000420886 KLHL40Q2TBA0 621 aa7.75□□□□□ -1.17
SBNO1-202ENST00000420886 CT47A1Q5JQC4 288 aaPredicted RBP7.75□□□□□ -1.17
SBNO1-202ENST00000420886 DYDC1Q8WWB3 177 aa7.75□□□□□ -1.17
SBNO1-202ENST00000420886 NOL7Q9UMY1 257 aaKnown RBP7.75□□□□□ -1.17
SBNO1-202ENST00000420886 C14orf37Q86TY3 774 aa7.75□□□□□ -1.17
SBNO1-202ENST00000420886 CHMP4CQ96CF2 233 aa7.75□□□□□ -1.17
SBNO1-202ENST00000420886 SYCE3A1L190 88 aa7.75□□□□□ -1.17
SBNO1-202ENST00000420886 HDAC5Q9UQL6 1122 aa7.75□□□□□ -1.17
SBNO1-202ENST00000420886 DNAAF4Q8WXU2 420 aa7.74□□□□□ -1.17
SBNO1-202ENST00000420886 ZNF622Q969S3 477 aaKnown RBP eCLIP7.74□□□□□ -1.178e-7■□□□□ 11.1
SBNO1-202ENST00000420886 INCENPQ9NQS7 918 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms