RNA–Protein interactions for RNA: ENST00000420568.5

SLC13A3-206, Transcript of solute carrier family 13 member 3, humanhuman

TSL 5

Gene SLC13A3, Length 1,256 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-206ENST00000420568 BCANQ96GW7 911 aa24.54■■□□□ 1.52
SLC13A3-206ENST00000420568 E9PCH4 1651 aa24.53■■□□□ 1.52
SLC13A3-206ENST00000420568 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.53■■□□□ 1.52
SLC13A3-206ENST00000420568 ALKQ9UM73 1620 aa24.53■■□□□ 1.52
SLC13A3-206ENST00000420568 PLEKHG1Q9ULL1 1385 aa24.53■■□□□ 1.52
SLC13A3-206ENST00000420568 NAIPQ13075 1403 aa24.52■■□□□ 1.52
SLC13A3-206ENST00000420568 TMEM131LA2VDJ0 1609 aa24.52■■□□□ 1.52
SLC13A3-206ENST00000420568 PPP1R15AO75807 674 aaPredicted RBP24.51■■□□□ 1.51
SLC13A3-206ENST00000420568 TBX22Q9Y458 520 aa24.48■■□□□ 1.51
SLC13A3-206ENST00000420568 TMEM94Q12767 1356 aa24.47■■□□□ 1.51
SLC13A3-206ENST00000420568 PROSER2Q86WR7 435 aaPredicted RBP24.47■■□□□ 1.51
SLC13A3-206ENST00000420568 SENP3Q9H4L4 574 aaPredicted RBP24.47■■□□□ 1.51
SLC13A3-206ENST00000420568 NUTM2DQ5VT03 806 aaPredicted RBP24.45■■□□□ 1.5
SLC13A3-206ENST00000420568 HFM1A2PYH4 1435 aa24.44■■□□□ 1.5
SLC13A3-206ENST00000420568 ILDR2Q71H61 639 aa24.43■■□□□ 1.5
SLC13A3-206ENST00000420568 RBM33Q96EV2 1170 aaKnown RBP24.42■■□□□ 1.5
SLC13A3-206ENST00000420568 TRIM52Q96A61 297 aa24.4■■□□□ 1.5
SLC13A3-206ENST00000420568 ADAMTS13Q76LX8 1427 aa24.4■■□□□ 1.5
SLC13A3-206ENST00000420568 NKTRP30414 1462 aaKnown RBP24.39■■□□□ 1.5
SLC13A3-206ENST00000420568 NWD1Q149M9 1564 aa24.38■■□□□ 1.49
SLC13A3-206ENST00000420568 MYO5BQ9ULV0 1848 aa24.38■■□□□ 1.49
SLC13A3-206ENST00000420568 FAM135BQ49AJ0 1406 aa24.35■■□□□ 1.49
SLC13A3-206ENST00000420568 PIK3R4Q99570 1358 aa24.35■■□□□ 1.49
SLC13A3-206ENST00000420568 ZNF326Q5BKZ1 582 aaKnown RBP24.35■■□□□ 1.49
SLC13A3-206ENST00000420568 XIRP1Q702N8 1843 aaKnown RBP24.35■■□□□ 1.49
SLC13A3-206ENST00000420568 SLC4A1APQ9BWU0 796 aaKnown RBP24.34■■□□□ 1.49
SLC13A3-206ENST00000420568 MSH6P52701 1360 aa24.31■■□□□ 1.48
SLC13A3-206ENST00000420568 NCOA3Q9Y6Q9 1424 aa24.31■■□□□ 1.48
SLC13A3-206ENST00000420568 SPHKAPQ2M3C7 1700 aa24.3■■□□□ 1.48
SLC13A3-206ENST00000420568 TRPM2O94759 1503 aa24.3■■□□□ 1.48
SLC13A3-206ENST00000420568 DIP2AQ14689 1571 aa24.29■■□□□ 1.48
SLC13A3-206ENST00000420568 AMOTL2Q9Y2J4 779 aa24.29■■□□□ 1.48
SLC13A3-206ENST00000420568 SLAIN2Q9P270 581 aa24.28■■□□□ 1.48
SLC13A3-206ENST00000420568 CHD2O14647 1828 aaKnown RBP24.28■■□□□ 1.48
SLC13A3-206ENST00000420568 PTPRUQ92729 1446 aa24.26■■□□□ 1.47
SLC13A3-206ENST00000420568 CLTCL1P53675 1640 aa24.25■■□□□ 1.47
SLC13A3-206ENST00000420568 SOCS7O14512 581 aa24.24■■□□□ 1.47
SLC13A3-206ENST00000420568 C19orf44Q9H6X5 657 aa24.24■■□□□ 1.47
SLC13A3-206ENST00000420568 MED1Q15648 1581 aaPredicted RBP24.23■■□□□ 1.47
SLC13A3-206ENST00000420568 SETBP1Q9Y6X0 1596 aa24.23■■□□□ 1.47
SLC13A3-206ENST00000420568 C14orf37Q86TY3 774 aa24.22■■□□□ 1.47
SLC13A3-206ENST00000420568 METP08581 1390 aa24.21■■□□□ 1.47
SLC13A3-206ENST00000420568 RPGRIP1LQ68CZ1 1315 aa24.21■■□□□ 1.47
SLC13A3-206ENST00000420568 VGFO15240 615 aaPredicted RBP24.21■■□□□ 1.47
SLC13A3-206ENST00000420568 FOXD1Q16676 465 aa24.21■■□□□ 1.47
SLC13A3-206ENST00000420568 MPHOSPH9Q99550 1183 aa24.21■■□□□ 1.47
SLC13A3-206ENST00000420568 NEXMIFQ5QGS0 1516 aa24.2■■□□□ 1.47
SLC13A3-206ENST00000420568 CADPS2Q86UW7 1296 aa24.2■■□□□ 1.46
SLC13A3-206ENST00000420568 NRXN3Q9Y4C0 1643 aa24.18■■□□□ 1.46
SLC13A3-206ENST00000420568 ACIN1Q9UKV3 1341 aaKnown RBP24.17■■□□□ 1.46
SLC13A3-206ENST00000420568 ATF3P18847 181 aa24.17■■□□□ 1.46
SLC13A3-206ENST00000420568 PHF23Q9BUL5 403 aaPredicted RBP24.15■■□□□ 1.46
SLC13A3-206ENST00000420568 ROBO1Q9Y6N7 1651 aa24.15■■□□□ 1.46
SLC13A3-206ENST00000420568 SETD5Q9C0A6 1442 aa24.12■■□□□ 1.45
SLC13A3-206ENST00000420568 KIF1BO60333 1816 aa24.1■■□□□ 1.45
SLC13A3-206ENST00000420568 CCDC144AA2RUR9 1427 aa24.1■■□□□ 1.45
SLC13A3-206ENST00000420568 XRN1Q8IZH2 1706 aaKnown RBP24.09■■□□□ 1.45
SLC13A3-206ENST00000420568 DCCP43146 1447 aa24.08■■□□□ 1.44
SLC13A3-206ENST00000420568 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.07■■□□□ 1.44
SLC13A3-206ENST00000420568 RGL3Q3MIN7 710 aa24.06■■□□□ 1.44
SLC13A3-206ENST00000420568 RGS17Q9UGC6 210 aaPredicted RBP24.06■■□□□ 1.44
SLC13A3-206ENST00000420568 SPATA31E1Q6ZUB1 1445 aa24.05■■□□□ 1.44
SLC13A3-206ENST00000420568 BRINP3Q76B58 766 aa24.05■■□□□ 1.44
SLC13A3-206ENST00000420568 JCADQ9P266 1359 aa24.03■■□□□ 1.44
SLC13A3-206ENST00000420568 ADGRF5Q8IZF2 1346 aa24.03■■□□□ 1.44
SLC13A3-206ENST00000420568 RAB3GAP2Q9H2M9 1393 aa24.02■■□□□ 1.44
SLC13A3-206ENST00000420568 ADGRL3Q9HAR2 1447 aa24.01■■□□□ 1.43
SLC13A3-206ENST00000420568 ANKRD30BQ9BXX2 1392 aa24.01■■□□□ 1.43
SLC13A3-206ENST00000420568 ROBO2Q9HCK4 1378 aa24■■□□□ 1.43
SLC13A3-206ENST00000420568 MST1RQ04912 1400 aa24■■□□□ 1.43
SLC13A3-206ENST00000420568 PTCH1Q13635 1447 aa24■■□□□ 1.43
SLC13A3-206ENST00000420568 PRAG1Q86YV5 1406 aa24■■□□□ 1.43
SLC13A3-206ENST00000420568 PHLPP1O60346 1717 aa23.98■■□□□ 1.43
SLC13A3-206ENST00000420568 AHDC1Q5TGY3 1603 aaPredicted RBP23.96■■□□□ 1.43
SLC13A3-206ENST00000420568 PPLO60437 1756 aa23.96■■□□□ 1.43
SLC13A3-206ENST00000420568 COL16A1Q07092 1604 aaPredicted RBP23.95■■□□□ 1.43
SLC13A3-206ENST00000420568 HRCP23327 699 aa23.95■■□□□ 1.42
SLC13A3-206ENST00000420568 SETD1AO15047 1707 aaKnown RBP23.95■■□□□ 1.42
SLC13A3-206ENST00000420568 SPATA31A6Q5VVP1 1343 aa23.94■■□□□ 1.42
SLC13A3-206ENST00000420568 ASXL1Q8IXJ9 1541 aa23.92■■□□□ 1.42
SLC13A3-206ENST00000420568 POTEAQ6S8J7 498 aa23.91■■□□□ 1.42
SLC13A3-206ENST00000420568 C1orf167Q5SNV9 1468 aa23.9■■□□□ 1.42
SLC13A3-206ENST00000420568 TMEM132EQ6IEE7 984 aa23.89■■□□□ 1.41
SLC13A3-206ENST00000420568 PIK3C2GO75747 1445 aa23.89■■□□□ 1.41
SLC13A3-206ENST00000420568 LRPPRCP42704 1394 aaKnown RBP23.89■■□□□ 1.41
SLC13A3-206ENST00000420568 LRRC59Q96AG4 307 aaKnown RBP23.88■■□□□ 1.41
SLC13A3-206ENST00000420568 C14orf93Q9H972 538 aaKnown RBP23.88■■□□□ 1.41
SLC13A3-206ENST00000420568 STK26Q9P289 416 aa23.88■■□□□ 1.41
SLC13A3-206ENST00000420568 ABCC11Q96J66 1382 aa23.88■■□□□ 1.41
SLC13A3-206ENST00000420568 DDX17Q92841 729 aaKnown RBP23.87■■□□□ 1.41
SLC13A3-206ENST00000420568 TECPR2O15040 1411 aa23.86■■□□□ 1.41
SLC13A3-206ENST00000420568 WAPLQ7Z5K2 1190 aa23.86■■□□□ 1.41
SLC13A3-206ENST00000420568 ORAI2Q96SN7 254 aa23.86■■□□□ 1.41
SLC13A3-206ENST00000420568 NALCNQ8IZF0 1738 aa23.86■■□□□ 1.41
SLC13A3-206ENST00000420568 LRP6O75581 1613 aa23.84■■□□□ 1.41
SLC13A3-206ENST00000420568 SIRT1Q96EB6 747 aa23.83■■□□□ 1.41
SLC13A3-206ENST00000420568 NRXN1Q9ULB1 1477 aa23.82■■□□□ 1.4
SLC13A3-206ENST00000420568 IFT172Q9UG01 1749 aa23.82■■□□□ 1.4
SLC13A3-206ENST00000420568 CFAP70Q5T0N1 1121 aa23.82■■□□□ 1.4
SLC13A3-206ENST00000420568 MEX3CQ5U5Q3 659 aaKnown RBP23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms