RNA–Protein interactions for RNA: ENST00000417105.5

COL9A2-203, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-203ENST00000417105 ZFYVE9O95405 1425 aa33.47■■■□□ 2.95
COL9A2-203ENST00000417105 RIMS2Q9UQ26 1411 aa33.47■■■□□ 2.95
COL9A2-203ENST00000417105 ALKQ9UM73 1620 aa33.47■■■□□ 2.95
COL9A2-203ENST00000417105 PPP1R15AO75807 674 aaPredicted RBP33.44■■■□□ 2.94
COL9A2-203ENST00000417105 HSPA1LP34931 641 aa33.44■■■□□ 2.94
COL9A2-203ENST00000417105 NAIPQ13075 1403 aa33.44■■■□□ 2.94
COL9A2-203ENST00000417105 HDGFP51858 240 aaKnown RBP33.42■■■□□ 2.94
COL9A2-203ENST00000417105 KCNA6P17658 529 aa33.41■■■□□ 2.94
COL9A2-203ENST00000417105 PLEKHG1Q9ULL1 1385 aa33.4■■■□□ 2.94
COL9A2-203ENST00000417105 NUTM2DQ5VT03 806 aaPredicted RBP33.38■■■□□ 2.93
COL9A2-203ENST00000417105 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.36■■■□□ 2.93
COL9A2-203ENST00000417105 XIRP1Q702N8 1843 aaKnown RBP33.36■■■□□ 2.93
COL9A2-203ENST00000417105 TMEM94Q12767 1356 aa33.34■■■□□ 2.93
COL9A2-203ENST00000417105 PROSER2Q86WR7 435 aaPredicted RBP33.34■■■□□ 2.93
COL9A2-203ENST00000417105 HFM1A2PYH4 1435 aa33.32■■■□□ 2.92
COL9A2-203ENST00000417105 SPHKAPQ2M3C7 1700 aa33.32■■■□□ 2.92
COL9A2-203ENST00000417105 RBM33Q96EV2 1170 aaKnown RBP33.32■■■□□ 2.92
COL9A2-203ENST00000417105 NWD1Q149M9 1564 aa33.3■■■□□ 2.92
COL9A2-203ENST00000417105 TRIM52Q96A61 297 aa33.29■■■□□ 2.92
COL9A2-203ENST00000417105 NKTRP30414 1462 aaKnown RBP33.27■■■□□ 2.92
COL9A2-203ENST00000417105 TBX22Q9Y458 520 aa33.27■■■□□ 2.92
COL9A2-203ENST00000417105 ILDR2Q71H61 639 aa33.26■■■□□ 2.91
COL9A2-203ENST00000417105 ADAMTS13Q76LX8 1427 aa33.24■■■□□ 2.91
COL9A2-203ENST00000417105 ZNF326Q5BKZ1 582 aaKnown RBP33.22■■■□□ 2.91
COL9A2-203ENST00000417105 CHD2O14647 1828 aaKnown RBP33.21■■■□□ 2.91
COL9A2-203ENST00000417105 CLTCL1P53675 1640 aa33.2■■■□□ 2.9
COL9A2-203ENST00000417105 TRPM2O94759 1503 aa33.18■■■□□ 2.9
COL9A2-203ENST00000417105 DIP2AQ14689 1571 aa33.17■■■□□ 2.9
COL9A2-203ENST00000417105 SLC4A1APQ9BWU0 796 aaKnown RBP33.16■■■□□ 2.9
COL9A2-203ENST00000417105 MSH6P52701 1360 aa33.14■■■□□ 2.9
COL9A2-203ENST00000417105 MED1Q15648 1581 aaPredicted RBP33.12■■■□□ 2.89
COL9A2-203ENST00000417105 FAM135BQ49AJ0 1406 aa33.11■■■□□ 2.89
COL9A2-203ENST00000417105 PIK3R4Q99570 1358 aa33.11■■■□□ 2.89
COL9A2-203ENST00000417105 AMOTL2Q9Y2J4 779 aa33.07■■■□□ 2.88
COL9A2-203ENST00000417105 PTPRUQ92729 1446 aa33.07■■■□□ 2.88
COL9A2-203ENST00000417105 NRXN3Q9Y4C0 1643 aa33.06■■■□□ 2.88
COL9A2-203ENST00000417105 SETBP1Q9Y6X0 1596 aa33.06■■■□□ 2.88
COL9A2-203ENST00000417105 KIF1BO60333 1816 aa33.06■■■□□ 2.88
COL9A2-203ENST00000417105 NEXMIFQ5QGS0 1516 aa33.06■■■□□ 2.88
COL9A2-203ENST00000417105 C14orf37Q86TY3 774 aa33.05■■■□□ 2.88
COL9A2-203ENST00000417105 FOXD1Q16676 465 aa33.04■■■□□ 2.88
COL9A2-203ENST00000417105 ROBO1Q9Y6N7 1651 aa33.04■■■□□ 2.88
COL9A2-203ENST00000417105 NCOA3Q9Y6Q9 1424 aa33.02■■■□□ 2.88
COL9A2-203ENST00000417105 SLAIN2Q9P270 581 aa33.02■■■□□ 2.88
COL9A2-203ENST00000417105 METP08581 1390 aa32.98■■■□□ 2.87
COL9A2-203ENST00000417105 C19orf44Q9H6X5 657 aa32.95■■■□□ 2.87
COL9A2-203ENST00000417105 SOCS7O14512 581 aa32.94■■■□□ 2.86
COL9A2-203ENST00000417105 MPHOSPH9Q99550 1183 aa32.94■■■□□ 2.86
COL9A2-203ENST00000417105 PHF23Q9BUL5 403 aaPredicted RBP32.94■■■□□ 2.86
COL9A2-203ENST00000417105 XRN1Q8IZH2 1706 aaKnown RBP32.94■■■□□ 2.86
COL9A2-203ENST00000417105 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.92■■■□□ 2.86
COL9A2-203ENST00000417105 VGFO15240 615 aaPredicted RBP32.92■■■□□ 2.86
COL9A2-203ENST00000417105 ATF3P18847 181 aa32.92■■■□□ 2.86
COL9A2-203ENST00000417105 CADPS2Q86UW7 1296 aa32.91■■■□□ 2.86
COL9A2-203ENST00000417105 RPGRIP1LQ68CZ1 1315 aa32.9■■■□□ 2.86
COL9A2-203ENST00000417105 SETD5Q9C0A6 1442 aa32.88■■■□□ 2.85
COL9A2-203ENST00000417105 CCDC144AA2RUR9 1427 aa32.86■■■□□ 2.85
COL9A2-203ENST00000417105 PHLPP1O60346 1717 aa32.83■■■□□ 2.85
COL9A2-203ENST00000417105 PPLO60437 1756 aa32.83■■■□□ 2.85
COL9A2-203ENST00000417105 RGL3Q3MIN7 710 aa32.82■■■□□ 2.84
COL9A2-203ENST00000417105 DCCP43146 1447 aa32.79■■■□□ 2.84
COL9A2-203ENST00000417105 SETD1AO15047 1707 aaKnown RBP32.79■■■□□ 2.84
COL9A2-203ENST00000417105 ACIN1Q9UKV3 1341 aaKnown RBP32.77■■■□□ 2.84
COL9A2-203ENST00000417105 RAB3GAP2Q9H2M9 1393 aa32.77■■■□□ 2.84
COL9A2-203ENST00000417105 SPATA31E1Q6ZUB1 1445 aa32.77■■■□□ 2.84
COL9A2-203ENST00000417105 ADGRL3Q9HAR2 1447 aa32.75■■■□□ 2.83
COL9A2-203ENST00000417105 BRINP3Q76B58 766 aa32.74■■■□□ 2.83
COL9A2-203ENST00000417105 ADGRF5Q8IZF2 1346 aa32.74■■■□□ 2.83
COL9A2-203ENST00000417105 COL16A1Q07092 1604 aaPredicted RBP32.73■■■□□ 2.83
COL9A2-203ENST00000417105 JCADQ9P266 1359 aa32.73■■■□□ 2.83
COL9A2-203ENST00000417105 ROBO2Q9HCK4 1378 aa32.71■■■□□ 2.83
COL9A2-203ENST00000417105 MST1RQ04912 1400 aa32.71■■■□□ 2.83
COL9A2-203ENST00000417105 PTCH1Q13635 1447 aa32.71■■■□□ 2.83
COL9A2-203ENST00000417105 RGS17Q9UGC6 210 aaPredicted RBP32.71■■■□□ 2.83
COL9A2-203ENST00000417105 AHDC1Q5TGY3 1603 aaPredicted RBP32.7■■■□□ 2.83
COL9A2-203ENST00000417105 NALCNQ8IZF0 1738 aa32.7■■■□□ 2.83
COL9A2-203ENST00000417105 ANKRD30BQ9BXX2 1392 aa32.69■■■□□ 2.82
COL9A2-203ENST00000417105 ASXL1Q8IXJ9 1541 aa32.66■■■□□ 2.82
COL9A2-203ENST00000417105 IFT172Q9UG01 1749 aa32.65■■■□□ 2.82
COL9A2-203ENST00000417105 PRAG1Q86YV5 1406 aa32.63■■■□□ 2.81
COL9A2-203ENST00000417105 STK26Q9P289 416 aa32.58■■■□□ 2.81
COL9A2-203ENST00000417105 PIK3C2GO75747 1445 aa32.58■■■□□ 2.81
COL9A2-203ENST00000417105 DDX17Q92841 729 aaKnown RBP32.57■■■□□ 2.8
COL9A2-203ENST00000417105 SPATA31A6Q5VVP1 1343 aa32.56■■■□□ 2.8
COL9A2-203ENST00000417105 C1orf167Q5SNV9 1468 aa32.56■■■□□ 2.8
COL9A2-203ENST00000417105 TMEM132EQ6IEE7 984 aa32.56■■■□□ 2.8
COL9A2-203ENST00000417105 POTEAQ6S8J7 498 aa32.55■■■□□ 2.8
COL9A2-203ENST00000417105 LRP6O75581 1613 aa32.54■■■□□ 2.8
COL9A2-203ENST00000417105 NHSL1Q5SYE7 1610 aa32.54■■■□□ 2.8
COL9A2-203ENST00000417105 SHPRHQ149N8 1683 aa32.53■■■□□ 2.8
COL9A2-203ENST00000417105 LRPPRCP42704 1394 aaKnown RBP32.53■■■□□ 2.8
COL9A2-203ENST00000417105 MEX3CQ5U5Q3 659 aaKnown RBP32.5■■■□□ 2.79
COL9A2-203ENST00000417105 WAPLQ7Z5K2 1190 aa32.5■■■□□ 2.79
COL9A2-203ENST00000417105 TECPR2O15040 1411 aa32.5■■■□□ 2.79
COL9A2-203ENST00000417105 ORAI2Q96SN7 254 aa32.49■■■□□ 2.79
COL9A2-203ENST00000417105 ABCC11Q96J66 1382 aa32.48■■■□□ 2.79
COL9A2-203ENST00000417105 HRCP23327 699 aa32.48■■■□□ 2.79
COL9A2-203ENST00000417105 NUTM2BA6NNL0 878 aaPredicted RBP32.47■■■□□ 2.79
COL9A2-203ENST00000417105 NUTM2EB1AL46 878 aaPredicted RBP32.47■■■□□ 2.79
COL9A2-203ENST00000417105 NUTM2AQ8IVF1 878 aaPredicted RBP32.47■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms