RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 PRR20AP86496 221 aa7.2□□□□□ -1.26
LINC00428-201ENST00000415620 MYT1Q01538 1121 aa7.2□□□□□ -1.26
LINC00428-201ENST00000415620 SPRYD7Q5W111 196 aa7.2□□□□□ -1.26
LINC00428-201ENST00000415620 NPDC1Q9NQX5 325 aaPredicted RBP7.2□□□□□ -1.26
LINC00428-201ENST00000415620 EYA1Q99502 592 aa7.19□□□□□ -1.26
LINC00428-201ENST00000415620 BLOC1S3Q6QNY0 202 aa7.18□□□□□ -1.26
LINC00428-201ENST00000415620 ANKLE1Q8NAG6 615 aa7.18□□□□□ -1.26
LINC00428-201ENST00000415620 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.18□□□□□ -1.26
LINC00428-201ENST00000415620 ZNF697Q5TEC3 545 aa7.16□□□□□ -1.26
LINC00428-201ENST00000415620 EMID1Q96A84 441 aaPredicted RBP7.16□□□□□ -1.26
LINC00428-201ENST00000415620 FAM187AA6NFU0 413 aa7.15□□□□□ -1.26
LINC00428-201ENST00000415620 KMT5BQ4FZB7 885 aa7.15□□□□□ -1.26
LINC00428-201ENST00000415620 POTECB2RU33 542 aa7.14□□□□□ -1.27
LINC00428-201ENST00000415620 PPEF1O14829 653 aaPredicted RBP7.14□□□□□ -1.27
LINC00428-201ENST00000415620 S1PR4O95977 384 aa7.14□□□□□ -1.27
LINC00428-201ENST00000415620 DNAJB2P25686 324 aa7.14□□□□□ -1.27
LINC00428-201ENST00000415620 LIAT1Q6ZQX7 453 aa7.14□□□□□ -1.27
LINC00428-201ENST00000415620 ACTN4O43707 911 aaKnown RBP7.13□□□□□ -1.27
LINC00428-201ENST00000415620 TLL1O43897 1013 aa7.13□□□□□ -1.27
LINC00428-201ENST00000415620 PAXIP1Q6ZW49 1069 aaPredicted RBP7.13□□□□□ -1.27
LINC00428-201ENST00000415620 TNFRSF10AO00220 468 aa7.12□□□□□ -1.27
LINC00428-201ENST00000415620 GDF9O60383 454 aa7.12□□□□□ -1.27
LINC00428-201ENST00000415620 TREML4Q6UXN2 200 aa7.12□□□□□ -1.27
LINC00428-201ENST00000415620 RBM46Q8TBY0 533 aaKnown RBP7.12□□□□□ -1.27
LINC00428-201ENST00000415620 ADH1BP00325 375 aa7.11□□□□□ -1.27
LINC00428-201ENST00000415620 CFAP44Q96MT7 982 aa7.11□□□□□ -1.27
LINC00428-201ENST00000415620 NR1I2O75469 434 aa7.1□□□□□ -1.27
LINC00428-201ENST00000415620 TMEM134Q9H6X4 195 aa7.1□□□□□ -1.27
LINC00428-201ENST00000415620 SLC6A16Q9GZN6 736 aa7.09□□□□□ -1.27
LINC00428-201ENST00000415620 AAASQ9NRG9 546 aa7.09□□□□□ -1.27
LINC00428-201ENST00000415620 CFHP08603 1231 aa7.08□□□□□ -1.28
LINC00428-201ENST00000415620 AMER1Q5JTC6 1135 aaPredicted RBP7.08□□□□□ -1.28
LINC00428-201ENST00000415620 ST8SIA5O15466 376 aa7.07□□□□□ -1.28
LINC00428-201ENST00000415620 MLLT3P42568 568 aaPredicted RBP7.07□□□□□ -1.28
LINC00428-201ENST00000415620 PTGDRQ13258 359 aa7.07□□□□□ -1.28
LINC00428-201ENST00000415620 LMOD2Q6P5Q4 547 aa7.07□□□□□ -1.28
LINC00428-201ENST00000415620 RCCD1A6NED2 376 aa7.06□□□□□ -1.28
LINC00428-201ENST00000415620 ARHGEF1Q92888 912 aaKnown RBP7.06□□□□□ -1.28
LINC00428-201ENST00000415620 ADGRG1Q9Y653 693 aa7.06□□□□□ -1.28
LINC00428-201ENST00000415620 FOXC1Q12948 553 aa7.05□□□□□ -1.28
LINC00428-201ENST00000415620 LCE2AQ5TA79 106 aaPredicted RBP7.05□□□□□ -1.28
LINC00428-201ENST00000415620 PLA2G2CQ5R387 149 aa7.04□□□□□ -1.28
LINC00428-201ENST00000415620 SCUBE3Q8IX30 993 aa7.04□□□□□ -1.28
LINC00428-201ENST00000415620 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.03□□□□□ -1.28
LINC00428-201ENST00000415620 SLC10A3P09131 477 aa7.03□□□□□ -1.28
LINC00428-201ENST00000415620 RSPH4AQ5TD94 716 aa7.03□□□□□ -1.28
LINC00428-201ENST00000415620 CRIPAKQ8N1N5 446 aa7.03□□□□□ -1.28
LINC00428-201ENST00000415620 KCNV2Q8TDN2 545 aa7.03□□□□□ -1.28
LINC00428-201ENST00000415620 RTN4Q9NQC3 1192 aaKnown RBP7.03□□□□□ -1.28
LINC00428-201ENST00000415620 PKD2L1Q9P0L9 805 aa7.03□□□□□ -1.28
LINC00428-201ENST00000415620 WFS1O76024 890 aa7.02□□□□□ -1.29
LINC00428-201ENST00000415620 CD2BP2O95400 341 aaKnown RBP7.02□□□□□ -1.29
LINC00428-201ENST00000415620 RPIAP49247 311 aa7.02□□□□□ -1.29
LINC00428-201ENST00000415620 SPSB2Q99619 263 aa7.02□□□□□ -1.29
LINC00428-201ENST00000415620 AXIN1O15169 862 aa7.01□□□□□ -1.29
LINC00428-201ENST00000415620 AVPP01185 164 aa7.01□□□□□ -1.29
LINC00428-201ENST00000415620 NUTM2FA1L443 756 aa7□□□□□ -1.29
LINC00428-201ENST00000415620 C11orf95C9JLR9 678 aaPredicted RBP7□□□□□ -1.29
LINC00428-201ENST00000415620 CTC1Q2NKJ3 1217 aa7□□□□□ -1.29
LINC00428-201ENST00000415620 FAM161AQ3B820 660 aa7□□□□□ -1.29
LINC00428-201ENST00000415620 CYP4X1Q8N118 509 aa7□□□□□ -1.29
LINC00428-201ENST00000415620 OATP04181 439 aa6.99□□□□□ -1.29
LINC00428-201ENST00000415620 PUS10Q3MIT2 529 aaKnown RBP6.99□□□□□ -1.29
LINC00428-201ENST00000415620 TOR4AQ9NXH8 423 aa6.99□□□□□ -1.29
LINC00428-201ENST00000415620 GMPR2Q9P2T1 348 aaKnown RBP6.99□□□□□ -1.29
LINC00428-201ENST00000415620 STK17AQ9UEE5 414 aa6.99□□□□□ -1.29
LINC00428-201ENST00000415620 DACH1Q9UI36 760 aa6.99□□□□□ -1.29
LINC00428-201ENST00000415620 FCHSD2O94868 740 aa6.98□□□□□ -1.29
LINC00428-201ENST00000415620 INSM1Q01101 510 aaPredicted RBP6.98□□□□□ -1.29
LINC00428-201ENST00000415620 TSHZ2Q9NRE2 1034 aa6.98□□□□□ -1.29
LINC00428-201ENST00000415620 SMCPP49901 116 aaPredicted RBP6.96□□□□□ -1.3
LINC00428-201ENST00000415620 FCF1Q9Y324 198 aaKnown RBP6.96□□□□□ -1.3
LINC00428-201ENST00000415620 TTC24A2A3L6 582 aaPredicted RBP6.95□□□□□ -1.3
LINC00428-201ENST00000415620 PXYLP1Q8TE99 480 aa6.95□□□□□ -1.3
LINC00428-201ENST00000415620 ZBTB24O43167 697 aaPredicted RBP6.94□□□□□ -1.3
LINC00428-201ENST00000415620 WIPF1O43516 503 aa6.94□□□□□ -1.3
LINC00428-201ENST00000415620 NFX1Q12986 1120 aaKnown RBP6.94□□□□□ -1.3
LINC00428-201ENST00000415620 FMNL1O95466 1100 aaPredicted RBP6.93□□□□□ -1.3
LINC00428-201ENST00000415620 MORN1Q5T089 497 aa6.93□□□□□ -1.3
LINC00428-201ENST00000415620 ATP6V1AP38606 617 aa6.92□□□□□ -1.3
LINC00428-201ENST00000415620 RDH13Q8NBN7 331 aa6.92□□□□□ -1.3
LINC00428-201ENST00000415620 THAP11Q96EK4 314 aa6.92□□□□□ -1.3
LINC00428-201ENST00000415620 METTL3Q86U44 580 aaKnown RBP6.91□□□□□ -1.3
LINC00428-201ENST00000415620 SEMA3EO15041 775 aa6.9□□□□□ -1.3
LINC00428-201ENST00000415620 FUT2Q10981 343 aa6.9□□□□□ -1.3
LINC00428-201ENST00000415620 P3H3Q8IVL6 736 aa6.9□□□□□ -1.3
LINC00428-201ENST00000415620 FAM160A2Q8N612 972 aaPredicted RBP6.9□□□□□ -1.3
LINC00428-201ENST00000415620 SNIP1Q8TAD8 396 aaKnown RBP6.9□□□□□ -1.3
LINC00428-201ENST00000415620 SENP2Q9HC62 589 aa6.9□□□□□ -1.3
LINC00428-201ENST00000415620 DAXXQ9UER7 740 aaPredicted RBP6.9□□□□□ -1.3
LINC00428-201ENST00000415620 SALL2Q9Y467 1007 aaPredicted RBP6.9□□□□□ -1.3
LINC00428-201ENST00000415620 HIC1Q14526 733 aa6.89□□□□□ -1.31
LINC00428-201ENST00000415620 ATP13A2Q9NQ11 1180 aa6.89□□□□□ -1.31
LINC00428-201ENST00000415620 SLC27A5Q9Y2P5 690 aa6.89□□□□□ -1.31
LINC00428-201ENST00000415620 WNT7AO00755 349 aa6.88□□□□□ -1.31
LINC00428-201ENST00000415620 TERTO14746 1132 aaKnown RBP6.88□□□□□ -1.31
LINC00428-201ENST00000415620 DDX11L8A8MPP1 907 aa6.87□□□□□ -1.31
LINC00428-201ENST00000415620 GPR37O15354 613 aa6.87□□□□□ -1.31
LINC00428-201ENST00000415620 SMPD1P17405 629 aa6.87□□□□□ -1.31
LINC00428-201ENST00000415620 MSS51Q4VC12 460 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 142.2 ms