RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 UNC13BO14795 1591 aa25.45■■□□□ 1.66
SF1-207ENST00000413951 PLEKHG1Q9ULL1 1385 aa25.44■■□□□ 1.66
SF1-207ENST00000413951 GCC2Q8IWJ2 1684 aa25.43■■□□□ 1.66
SF1-207ENST00000413951 NKTRP30414 1462 aaKnown RBP25.43■■□□□ 1.66
SF1-207ENST00000413951 FAM135BQ49AJ0 1406 aa25.43■■□□□ 1.66
SF1-207ENST00000413951 RIMS2Q9UQ26 1411 aa25.41■■□□□ 1.66
SF1-207ENST00000413951 ZFYVE9O95405 1425 aa25.4■■□□□ 1.66
SF1-207ENST00000413951 CHGAP10645 457 aaKnown RBP25.4■■□□□ 1.66
SF1-207ENST00000413951 NUP155O75694 1391 aa25.4■■□□□ 1.66
SF1-207ENST00000413951 ITGAEP38570 1179 aa25.38■■□□□ 1.65
SF1-207ENST00000413951 SENP3Q9H4L4 574 aaPredicted RBP25.38■■□□□ 1.65
SF1-207ENST00000413951 TBX22Q9Y458 520 aa25.38■■□□□ 1.65
SF1-207ENST00000413951 MSH6P52701 1360 aa25.38■■□□□ 1.65
SF1-207ENST00000413951 IQGAP3Q86VI3 1631 aa25.37■■□□□ 1.65
SF1-207ENST00000413951 NWD1Q149M9 1564 aa25.36■■□□□ 1.65
SF1-207ENST00000413951 TMEM131LA2VDJ0 1609 aa25.36■■□□□ 1.65
SF1-207ENST00000413951 XIRP1Q702N8 1843 aaKnown RBP25.35■■□□□ 1.65
SF1-207ENST00000413951 PPARGC1BQ86YN6 1023 aaKnown RBP25.33■■□□□ 1.65
SF1-207ENST00000413951 NCOA3Q9Y6Q9 1424 aa25.32■■□□□ 1.64
SF1-207ENST00000413951 E9PCH4 1651 aa25.32■■□□□ 1.64
SF1-207ENST00000413951 PIK3R4Q99570 1358 aa25.31■■□□□ 1.64
SF1-207ENST00000413951 SLAIN2Q9P270 581 aa25.28■■□□□ 1.64
SF1-207ENST00000413951 DIP2AQ14689 1571 aa25.27■■□□□ 1.64
SF1-207ENST00000413951 RBM33Q96EV2 1170 aaKnown RBP25.27■■□□□ 1.64
SF1-207ENST00000413951 C14orf37Q86TY3 774 aa25.25■■□□□ 1.63
SF1-207ENST00000413951 MYO5BQ9ULV0 1848 aa25.25■■□□□ 1.63
SF1-207ENST00000413951 CHD2O14647 1828 aaKnown RBP25.24■■□□□ 1.63
SF1-207ENST00000413951 RRBP1Q9P2E9 1410 aaKnown RBP25.24■■□□□ 1.63
SF1-207ENST00000413951 ROBO1Q9Y6N7 1651 aa25.23■■□□□ 1.63
SF1-207ENST00000413951 ADAMTS13Q76LX8 1427 aa25.22■■□□□ 1.63
SF1-207ENST00000413951 CADPS2Q86UW7 1296 aa25.22■■□□□ 1.63
SF1-207ENST00000413951 NUTM2DQ5VT03 806 aaPredicted RBP25.21■■□□□ 1.63
SF1-207ENST00000413951 C19orf44Q9H6X5 657 aa25.2■■□□□ 1.62
SF1-207ENST00000413951 TRPM2O94759 1503 aa25.19■■□□□ 1.62
SF1-207ENST00000413951 ATF3P18847 181 aa25.19■■□□□ 1.62
SF1-207ENST00000413951 ZNF326Q5BKZ1 582 aaKnown RBP25.19■■□□□ 1.62
SF1-207ENST00000413951 AMOTL2Q9Y2J4 779 aa25.16■■□□□ 1.62
SF1-207ENST00000413951 JCADQ9P266 1359 aa25.15■■□□□ 1.62
SF1-207ENST00000413951 SPHKAPQ2M3C7 1700 aa25.14■■□□□ 1.61
SF1-207ENST00000413951 NAIPQ13075 1403 aa25.11■■□□□ 1.61
SF1-207ENST00000413951 RGS17Q9UGC6 210 aaPredicted RBP25.1■■□□□ 1.61
SF1-207ENST00000413951 SETBP1Q9Y6X0 1596 aa25.1■■□□□ 1.61
SF1-207ENST00000413951 DCCP43146 1447 aa25.08■■□□□ 1.61
SF1-207ENST00000413951 PHLPP1O60346 1717 aa25.08■■□□□ 1.61
SF1-207ENST00000413951 TRIM52Q96A61 297 aa25.07■■□□□ 1.6
SF1-207ENST00000413951 SPATA31A6Q5VVP1 1343 aa25.06■■□□□ 1.6
SF1-207ENST00000413951 HFM1A2PYH4 1435 aa25.05■■□□□ 1.6
SF1-207ENST00000413951 PTPRUQ92729 1446 aa25.04■■□□□ 1.6
SF1-207ENST00000413951 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.04■■□□□ 1.6
SF1-207ENST00000413951 VGFO15240 615 aaPredicted RBP25.04■■□□□ 1.6
SF1-207ENST00000413951 SLC4A1APQ9BWU0 796 aaKnown RBP25.01■■□□□ 1.59
SF1-207ENST00000413951 RPGRIP1LQ68CZ1 1315 aa25.01■■□□□ 1.59
SF1-207ENST00000413951 CLTCL1P53675 1640 aa25■■□□□ 1.59
SF1-207ENST00000413951 AHDC1Q5TGY3 1603 aaPredicted RBP25■■□□□ 1.59
SF1-207ENST00000413951 NRXN3Q9Y4C0 1643 aa25■■□□□ 1.59
SF1-207ENST00000413951 METP08581 1390 aa24.99■■□□□ 1.59
SF1-207ENST00000413951 COL16A1Q07092 1604 aaPredicted RBP24.99■■□□□ 1.59
SF1-207ENST00000413951 XRN1Q8IZH2 1706 aaKnown RBP24.98■■□□□ 1.59
SF1-207ENST00000413951 NEXMIFQ5QGS0 1516 aa24.98■■□□□ 1.59
SF1-207ENST00000413951 POTEAQ6S8J7 498 aa24.98■■□□□ 1.59
SF1-207ENST00000413951 BRINP3Q76B58 766 aa24.98■■□□□ 1.59
SF1-207ENST00000413951 KIF1BO60333 1816 aa24.98■■□□□ 1.59
SF1-207ENST00000413951 MEX3CQ5U5Q3 659 aaKnown RBP24.97■■□□□ 1.59
SF1-207ENST00000413951 ZNF772Q68DY9 489 aaPredicted RBP24.95■■□□□ 1.58
SF1-207ENST00000413951 ACIN1Q9UKV3 1341 aaKnown RBP24.94■■□□□ 1.58
SF1-207ENST00000413951 ADGRL3Q9HAR2 1447 aa24.93■■□□□ 1.58
SF1-207ENST00000413951 LRRC59Q96AG4 307 aaKnown RBP24.91■■□□□ 1.58
SF1-207ENST00000413951 MST1RQ04912 1400 aa24.91■■□□□ 1.58
SF1-207ENST00000413951 ASXL1Q8IXJ9 1541 aa24.9■■□□□ 1.58
SF1-207ENST00000413951 SHPRHQ149N8 1683 aa24.88■■□□□ 1.57
SF1-207ENST00000413951 PTCH1Q13635 1447 aa24.88■■□□□ 1.57
SF1-207ENST00000413951 SETD5Q9C0A6 1442 aa24.87■■□□□ 1.57
SF1-207ENST00000413951 CCDC144AA2RUR9 1427 aa24.84■■□□□ 1.57
SF1-207ENST00000413951 PRAG1Q86YV5 1406 aa24.84■■□□□ 1.57
SF1-207ENST00000413951 LRP6O75581 1613 aa24.83■■□□□ 1.57
SF1-207ENST00000413951 NUTM2BA6NNL0 878 aaPredicted RBP24.81■■□□□ 1.56
SF1-207ENST00000413951 NUTM2EB1AL46 878 aaPredicted RBP24.81■■□□□ 1.56
SF1-207ENST00000413951 NUTM2AQ8IVF1 878 aaPredicted RBP24.81■■□□□ 1.56
SF1-207ENST00000413951 NHSL1Q5SYE7 1610 aa24.79■■□□□ 1.56
SF1-207ENST00000413951 C1orf167Q5SNV9 1468 aa24.79■■□□□ 1.56
SF1-207ENST00000413951 MPHOSPH9Q99550 1183 aa24.79■■□□□ 1.56
SF1-207ENST00000413951 ANKRD30BQ9BXX2 1392 aa24.79■■□□□ 1.56
SF1-207ENST00000413951 ROBO2Q9HCK4 1378 aa24.79■■□□□ 1.56
SF1-207ENST00000413951 NALCNQ8IZF0 1738 aa24.78■■□□□ 1.56
SF1-207ENST00000413951 RXRBP28702 533 aa24.77■■□□□ 1.56
SF1-207ENST00000413951 PPLO60437 1756 aa24.75■■□□□ 1.55
SF1-207ENST00000413951 FOXD1Q16676 465 aa24.75■■□□□ 1.55
SF1-207ENST00000413951 SETD1AO15047 1707 aaKnown RBP24.75■■□□□ 1.55
SF1-207ENST00000413951 PNPLA6Q8IY17 1366 aa24.73■■□□□ 1.55
SF1-207ENST00000413951 RGL3Q3MIN7 710 aa24.73■■□□□ 1.55
SF1-207ENST00000413951 AFF2P51816 1311 aa24.72■■□□□ 1.55
SF1-207ENST00000413951 SPATA31E1Q6ZUB1 1445 aa24.7■■□□□ 1.55
SF1-207ENST00000413951 SOS2Q07890 1332 aaPredicted RBP24.7■■□□□ 1.54
SF1-207ENST00000413951 DDX17Q92841 729 aaKnown RBP24.7■■□□□ 1.54
SF1-207ENST00000413951 ADGRF5Q8IZF2 1346 aa24.69■■□□□ 1.54
SF1-207ENST00000413951 ORAI2Q96SN7 254 aa24.69■■□□□ 1.54
SF1-207ENST00000413951 CDK12Q9NYV4 1490 aaPredicted RBP24.69■■□□□ 1.54
SF1-207ENST00000413951 C8orf37Q96NL8 207 aa24.68■■□□□ 1.54
SF1-207ENST00000413951 LAMC1P11047 1609 aa24.68■■□□□ 1.54
SF1-207ENST00000413951 NPHP3Q7Z494 1330 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms