RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 PPME1Q9Y570 386 aa8.21□□□□□ -1.1
CBX1P3-201ENST00000413296 LMOD1P29536 600 aaPredicted RBP8.2□□□□□ -1.1
CBX1P3-201ENST00000413296 ZNF326Q5BKZ1 582 aaKnown RBP8.2□□□□□ -1.1
CBX1P3-201ENST00000413296 NOM1Q5C9Z4 860 aaKnown RBP8.2□□□□□ -1.1
CBX1P3-201ENST00000413296 PPP2R2DQ66LE6 453 aa8.19□□□□□ -1.1
CBX1P3-201ENST00000413296 DPH6Q7L8W6 267 aa8.19□□□□□ -1.1
CBX1P3-201ENST00000413296 EXOC8Q8IYI6 725 aa8.19□□□□□ -1.1
CBX1P3-201ENST00000413296 TBC1D2Q9BYX2 928 aa8.19□□□□□ -1.1
CBX1P3-201ENST00000413296 PALM3A6NDB9 673 aaPredicted RBP8.18□□□□□ -1.1
CBX1P3-201ENST00000413296 ZNF579Q8NAF0 562 aaKnown RBP8.18□□□□□ -1.1
CBX1P3-201ENST00000413296 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.18□□□□□ -1.1
CBX1P3-201ENST00000413296 TPD52L2O43399 206 aaKnown RBP8.17□□□□□ -1.1
CBX1P3-201ENST00000413296 OSBPP22059 807 aa8.17□□□□□ -1.1
CBX1P3-201ENST00000413296 CDCA8Q53HL2 280 aa8.17□□□□□ -1.1
CBX1P3-201ENST00000413296 FBXO31Q5XUX0 539 aaPredicted RBP8.17□□□□□ -1.1
CBX1P3-201ENST00000413296 RAB11FIP3O75154 756 aa8.16□□□□□ -1.1
CBX1P3-201ENST00000413296 GORABQ5T7V8 394 aa8.16□□□□□ -1.1
CBX1P3-201ENST00000413296 NOP9Q86U38 636 aaKnown RBP8.16□□□□□ -1.1
CBX1P3-201ENST00000413296 MS4A4AQ96JQ5 239 aa8.16□□□□□ -1.1
CBX1P3-201ENST00000413296 GPHNQ9NQX3 736 aaPredicted RBP8.16□□□□□ -1.1
CBX1P3-201ENST00000413296 RBM27Q9P2N5 1060 aaKnown RBP8.16□□□□□ -1.1
CBX1P3-201ENST00000413296 SUGT1Q9Y2Z0 365 aa8.16□□□□□ -1.1
CBX1P3-201ENST00000413296 TMA7Q9Y2S6 64 aaKnown RBP8.15□□□□□ -1.1
CBX1P3-201ENST00000413296 MARSP56192 900 aaKnown RBP8.14□□□□□ -1.11
CBX1P3-201ENST00000413296 PTGDRQ13258 359 aa8.14□□□□□ -1.11
CBX1P3-201ENST00000413296 WASHC4Q2M389 1173 aa8.14□□□□□ -1.11
CBX1P3-201ENST00000413296 RBM46Q8TBY0 533 aaKnown RBP8.14□□□□□ -1.11
CBX1P3-201ENST00000413296 RECKO95980 971 aa8.13□□□□□ -1.11
CBX1P3-201ENST00000413296 FOSBP53539 338 aa8.13□□□□□ -1.11
CBX1P3-201ENST00000413296 FAM217BQ9NTX9 383 aaPredicted RBP8.13□□□□□ -1.11
CBX1P3-201ENST00000413296 PRR29P0C7W0 189 aa8.12□□□□□ -1.11
CBX1P3-201ENST00000413296 ERCC5P28715 1186 aaPredicted RBP8.12□□□□□ -1.11
CBX1P3-201ENST00000413296 ARID4AP29374 1257 aaPredicted RBP8.12□□□□□ -1.11
CBX1P3-201ENST00000413296 NPAS4Q8IUM7 802 aa8.12□□□□□ -1.11
CBX1P3-201ENST00000413296 TEX2Q8IWB9 1127 aa8.12□□□□□ -1.11
CBX1P3-201ENST00000413296 SPDYE1Q8NFV5 336 aaPredicted RBP8.12□□□□□ -1.11
CBX1P3-201ENST00000413296 TSPYL2Q9H2G4 693 aaPredicted RBP8.12□□□□□ -1.11
CBX1P3-201ENST00000413296 METTL14Q9HCE5 456 aaKnown RBP8.12□□□□□ -1.11
CBX1P3-201ENST00000413296 TFIP11Q9UBB9 837 aaKnown RBP8.12□□□□□ -1.11
CBX1P3-201ENST00000413296 ANKRD33BA6NCL7 494 aa8.11□□□□□ -1.11
CBX1P3-201ENST00000413296 SOWAHDA6NJG2 315 aa8.11□□□□□ -1.11
CBX1P3-201ENST00000413296 DIXDC1Q155Q3 683 aa8.11□□□□□ -1.11
CBX1P3-201ENST00000413296 SLC52A1Q9NWF4 448 aa8.11□□□□□ -1.11
CBX1P3-201ENST00000413296 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.11□□□□□ -1.11
CBX1P3-201ENST00000413296 SBNO2Q9Y2G9 1366 aa8.1□□□□□ -1.11
CBX1P3-201ENST00000413296 HSP90AB4PQ58FF6 505 aa8.1□□□□□ -1.11
CBX1P3-201ENST00000413296 CCDC181Q5TID7 509 aa8.1□□□□□ -1.11
CBX1P3-201ENST00000413296 CDCA7Q9BWT1 371 aaPredicted RBP8.1□□□□□ -1.11
CBX1P3-201ENST00000413296 LIMD1Q9UGP4 676 aa8.1□□□□□ -1.11
CBX1P3-201ENST00000413296 PHLDB3Q6NSJ2 640 aa8.09□□□□□ -1.11
CBX1P3-201ENST00000413296 NDUFB9Q9Y6M9 179 aa8.09□□□□□ -1.11
CBX1P3-201ENST00000413296 TLDC2A0PJX2 215 aa8.08□□□□□ -1.12
CBX1P3-201ENST00000413296 SETQ01105 290 aaPredicted RBP8.08□□□□□ -1.12
CBX1P3-201ENST00000413296 TSNAXIP1Q2TAA8 658 aa8.08□□□□□ -1.12
CBX1P3-201ENST00000413296 PHOX2BQ99453 314 aa8.08□□□□□ -1.12
CBX1P3-201ENST00000413296 LNPKQ9C0E8 428 aa8.08□□□□□ -1.12
CBX1P3-201ENST00000413296 ALG2Q9H553 416 aa8.08□□□□□ -1.12
CBX1P3-201ENST00000413296 CUEDC1Q9NWM3 386 aaPredicted RBP8.08□□□□□ -1.12
CBX1P3-201ENST00000413296 IGBP1P78318 339 aa8.07□□□□□ -1.12
CBX1P3-201ENST00000413296 ZNF710Q8N1W2 664 aa8.07□□□□□ -1.12
CBX1P3-201ENST00000413296 LARGE2Q8N3Y3 721 aa8.07□□□□□ -1.12
CBX1P3-201ENST00000413296 AKT1S1Q96B36 256 aa8.07□□□□□ -1.12
CBX1P3-201ENST00000413296 UCN2Q96RP3 112 aa8.07□□□□□ -1.12
CBX1P3-201ENST00000413296 TANGO6Q9C0B7 1094 aa8.07□□□□□ -1.12
CBX1P3-201ENST00000413296 BCL11AQ9H165 835 aa8.07□□□□□ -1.12
CBX1P3-201ENST00000413296 MAFBQ9Y5Q3 323 aaPredicted RBP8.07□□□□□ -1.12
CBX1P3-201ENST00000413296 AP1G2O75843 785 aa8.06□□□□□ -1.12
CBX1P3-201ENST00000413296 C7P10643 843 aa8.06□□□□□ -1.12
CBX1P3-201ENST00000413296 DSG2Q14126 1118 aa8.06□□□□□ -1.12
CBX1P3-201ENST00000413296 ELOAQ14241 798 aaKnown RBP8.06□□□□□ -1.12
CBX1P3-201ENST00000413296 MORC4Q8TE76 937 aa8.06□□□□□ -1.12
CBX1P3-201ENST00000413296 GPATCH3Q96I76 525 aa8.06□□□□□ -1.12
CBX1P3-201ENST00000413296 DNAJC2Q99543 621 aaKnown RBP8.06□□□□□ -1.12
CBX1P3-201ENST00000413296 BIN2Q9UBW5 565 aaPredicted RBP8.06□□□□□ -1.12
CBX1P3-201ENST00000413296 hCG_2014768A0A024R1R8 64 aa8.05□□□□□ -1.12
CBX1P3-201ENST00000413296 A0A0U1RQG5 324 aaPredicted RBP8.05□□□□□ -1.12
CBX1P3-201ENST00000413296 MAP3K9P80192 1104 aa8.05□□□□□ -1.12
CBX1P3-201ENST00000413296 VAC14Q08AM6 782 aa8.05□□□□□ -1.12
CBX1P3-201ENST00000413296 TMEM164Q5U3C3 297 aa8.05□□□□□ -1.12
CBX1P3-201ENST00000413296 RIC3Q7Z5B4 369 aa8.05□□□□□ -1.12
CBX1P3-201ENST00000413296 KLHL42Q9P2K6 505 aa8.05□□□□□ -1.12
CBX1P3-201ENST00000413296 MCCD1P59942 119 aaPredicted RBP8.04□□□□□ -1.12
CBX1P3-201ENST00000413296 TUSC1Q2TAM9 212 aa8.04□□□□□ -1.12
CBX1P3-201ENST00000413296 EGFLAMQ63HQ2 1017 aa8.04□□□□□ -1.12
CBX1P3-201ENST00000413296 SDE2Q6IQ49 451 aa8.04□□□□□ -1.12
CBX1P3-201ENST00000413296 CLEC11AQ9Y240 323 aa8.04□□□□□ -1.12
CBX1P3-201ENST00000413296 MAFGO15525 162 aa8.03□□□□□ -1.12
CBX1P3-201ENST00000413296 USP17L8P0C7I0 530 aa8.03□□□□□ -1.12
CBX1P3-201ENST00000413296 SSFA2P28290 1259 aa8.03□□□□□ -1.12
CBX1P3-201ENST00000413296 PTGER2P43116 358 aa8.03□□□□□ -1.12
CBX1P3-201ENST00000413296 PTPROQ16827 1216 aa8.03□□□□□ -1.12
CBX1P3-201ENST00000413296 FBXO33Q7Z6M2 555 aa8.03□□□□□ -1.12
CBX1P3-201ENST00000413296 PIK3R5Q8WYR1 880 aa8.03□□□□□ -1.12
CBX1P3-201ENST00000413296 FARP1Q9Y4F1 1045 aaPredicted RBP8.03□□□□□ -1.12
CBX1P3-201ENST00000413296 CENPBP07199 599 aaPredicted RBP8.02□□□□□ -1.13
CBX1P3-201ENST00000413296 SERPINB4P48594 390 aa8.02□□□□□ -1.13
CBX1P3-201ENST00000413296 PRIM1P49642 420 aaKnown RBP8.02□□□□□ -1.13
CBX1P3-201ENST00000413296 TAGLNQ01995 201 aaKnown RBP8.02□□□□□ -1.13
CBX1P3-201ENST00000413296 DDX12PQ92771 950 aa8.02□□□□□ -1.13
CBX1P3-201ENST00000413296 VTI1AQ96AJ9 217 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms