RNA–Protein interactions for RNA: ENST00000412500.1

LINC00659-201, long intergenic non-protein coding RNA 659, humanhuman

TSL 1 (best) BASIC

Gene LINC00659, Length 540 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00659-201ENST00000412500 SLC26A8Q96RN1 970 aa24.24■■□□□ 1.47
LINC00659-201ENST00000412500 PIP4K2BP78356 416 aa24.23■■□□□ 1.47
LINC00659-201ENST00000412500 SPHKAPQ2M3C7 1700 aa24.22■■□□□ 1.47
LINC00659-201ENST00000412500 KCNA6P17658 529 aa24.22■■□□□ 1.47
LINC00659-201ENST00000412500 HSPA1LP34931 641 aa24.22■■□□□ 1.47
LINC00659-201ENST00000412500 HFM1A2PYH4 1435 aa24.21■■□□□ 1.47
LINC00659-201ENST00000412500 DISP3Q9P2K9 1392 aa24.19■■□□□ 1.46
LINC00659-201ENST00000412500 CHD2O14647 1828 aaKnown RBP24.18■■□□□ 1.46
LINC00659-201ENST00000412500 NKTRP30414 1462 aaKnown RBP24.18■■□□□ 1.46
LINC00659-201ENST00000412500 ADAMTS13Q76LX8 1427 aa24.18■■□□□ 1.46
LINC00659-201ENST00000412500 TMEM94Q12767 1356 aa24.16■■□□□ 1.46
LINC00659-201ENST00000412500 SCAF1Q9H7N4 1312 aaKnown RBP24.16■■□□□ 1.46
LINC00659-201ENST00000412500 ILDR2Q71H61 639 aa24.14■■□□□ 1.45
LINC00659-201ENST00000412500 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.14■■□□□ 1.45
LINC00659-201ENST00000412500 CLTCL1P53675 1640 aa24.13■■□□□ 1.45
LINC00659-201ENST00000412500 CHGAP10645 457 aaKnown RBP24.13■■□□□ 1.45
LINC00659-201ENST00000412500 HDGFP51858 240 aaKnown RBP24.13■■□□□ 1.45
LINC00659-201ENST00000412500 TBX22Q9Y458 520 aa24.13■■□□□ 1.45
LINC00659-201ENST00000412500 TRPM2O94759 1503 aa24.13■■□□□ 1.45
LINC00659-201ENST00000412500 DIP2AQ14689 1571 aa24.12■■□□□ 1.45
LINC00659-201ENST00000412500 NRXN3Q9Y4C0 1643 aa24.11■■□□□ 1.45
LINC00659-201ENST00000412500 PPP1R15AO75807 674 aaPredicted RBP24.1■■□□□ 1.45
LINC00659-201ENST00000412500 NUTM2DQ5VT03 806 aaPredicted RBP24.1■■□□□ 1.45
LINC00659-201ENST00000412500 SENP3Q9H4L4 574 aaPredicted RBP24.1■■□□□ 1.45
LINC00659-201ENST00000412500 PROSER2Q86WR7 435 aaPredicted RBP24.08■■□□□ 1.45
LINC00659-201ENST00000412500 RBM33Q96EV2 1170 aaKnown RBP24.08■■□□□ 1.45
LINC00659-201ENST00000412500 MED1Q15648 1581 aaPredicted RBP24.07■■□□□ 1.44
LINC00659-201ENST00000412500 BCANQ96GW7 911 aa24.06■■□□□ 1.44
LINC00659-201ENST00000412500 FAM135BQ49AJ0 1406 aa24.06■■□□□ 1.44
LINC00659-201ENST00000412500 SETBP1Q9Y6X0 1596 aa24.06■■□□□ 1.44
LINC00659-201ENST00000412500 NEXMIFQ5QGS0 1516 aa24.05■■□□□ 1.44
LINC00659-201ENST00000412500 PIK3R4Q99570 1358 aa24.05■■□□□ 1.44
LINC00659-201ENST00000412500 PTPRUQ92729 1446 aa24.05■■□□□ 1.44
LINC00659-201ENST00000412500 NCOA3Q9Y6Q9 1424 aa24.01■■□□□ 1.43
LINC00659-201ENST00000412500 KIF1BO60333 1816 aa24■■□□□ 1.43
LINC00659-201ENST00000412500 ROBO1Q9Y6N7 1651 aa24■■□□□ 1.43
LINC00659-201ENST00000412500 XRN1Q8IZH2 1706 aaKnown RBP24■■□□□ 1.43
LINC00659-201ENST00000412500 TRIM52Q96A61 297 aa23.98■■□□□ 1.43
LINC00659-201ENST00000412500 MSH6P52701 1360 aa23.97■■□□□ 1.43
LINC00659-201ENST00000412500 SLC4A1APQ9BWU0 796 aaKnown RBP23.96■■□□□ 1.43
LINC00659-201ENST00000412500 METP08581 1390 aa23.94■■□□□ 1.42
LINC00659-201ENST00000412500 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.94■■□□□ 1.42
LINC00659-201ENST00000412500 ZNF326Q5BKZ1 582 aaKnown RBP23.94■■□□□ 1.42
LINC00659-201ENST00000412500 SETD1AO15047 1707 aaKnown RBP23.93■■□□□ 1.42
LINC00659-201ENST00000412500 AMOTL2Q9Y2J4 779 aa23.93■■□□□ 1.42
LINC00659-201ENST00000412500 SLAIN2Q9P270 581 aa23.91■■□□□ 1.42
LINC00659-201ENST00000412500 FOXD1Q16676 465 aa23.9■■□□□ 1.42
LINC00659-201ENST00000412500 PPLO60437 1756 aa23.89■■□□□ 1.42
LINC00659-201ENST00000412500 SOCS7O14512 581 aa23.88■■□□□ 1.41
LINC00659-201ENST00000412500 C19orf44Q9H6X5 657 aa23.87■■□□□ 1.41
LINC00659-201ENST00000412500 MPHOSPH9Q99550 1183 aa23.85■■□□□ 1.41
LINC00659-201ENST00000412500 RPGRIP1LQ68CZ1 1315 aa23.84■■□□□ 1.41
LINC00659-201ENST00000412500 SPATA31E1Q6ZUB1 1445 aa23.84■■□□□ 1.41
LINC00659-201ENST00000412500 DCCP43146 1447 aa23.84■■□□□ 1.41
LINC00659-201ENST00000412500 PHLPP1O60346 1717 aa23.83■■□□□ 1.41
LINC00659-201ENST00000412500 COL16A1Q07092 1604 aaPredicted RBP23.83■■□□□ 1.41
LINC00659-201ENST00000412500 PRAG1Q86YV5 1406 aa23.83■■□□□ 1.4
LINC00659-201ENST00000412500 SETD5Q9C0A6 1442 aa23.83■■□□□ 1.4
LINC00659-201ENST00000412500 VGFO15240 615 aaPredicted RBP23.81■■□□□ 1.4
LINC00659-201ENST00000412500 CADPS2Q86UW7 1296 aa23.81■■□□□ 1.4
LINC00659-201ENST00000412500 IFT172Q9UG01 1749 aa23.8■■□□□ 1.4
LINC00659-201ENST00000412500 AHDC1Q5TGY3 1603 aaPredicted RBP23.8■■□□□ 1.4
LINC00659-201ENST00000412500 NALCNQ8IZF0 1738 aa23.79■■□□□ 1.4
LINC00659-201ENST00000412500 RGS17Q9UGC6 210 aaPredicted RBP23.79■■□□□ 1.4
LINC00659-201ENST00000412500 CCDC144AA2RUR9 1427 aa23.78■■□□□ 1.4
LINC00659-201ENST00000412500 C14orf37Q86TY3 774 aa23.78■■□□□ 1.4
LINC00659-201ENST00000412500 MST1RQ04912 1400 aa23.77■■□□□ 1.4
LINC00659-201ENST00000412500 PTCH1Q13635 1447 aa23.77■■□□□ 1.4
LINC00659-201ENST00000412500 ADGRL3Q9HAR2 1447 aa23.77■■□□□ 1.4
LINC00659-201ENST00000412500 ATF3P18847 181 aa23.76■■□□□ 1.39
LINC00659-201ENST00000412500 RAB3GAP2Q9H2M9 1393 aa23.75■■□□□ 1.39
LINC00659-201ENST00000412500 BRINP3Q76B58 766 aa23.74■■□□□ 1.39
LINC00659-201ENST00000412500 ADGRF5Q8IZF2 1346 aa23.74■■□□□ 1.39
LINC00659-201ENST00000412500 ACIN1Q9UKV3 1341 aaKnown RBP23.74■■□□□ 1.39
LINC00659-201ENST00000412500 ROBO2Q9HCK4 1378 aa23.74■■□□□ 1.39
LINC00659-201ENST00000412500 ASXL1Q8IXJ9 1541 aa23.71■■□□□ 1.39
LINC00659-201ENST00000412500 JCADQ9P266 1359 aa23.71■■□□□ 1.39
LINC00659-201ENST00000412500 PHF23Q9BUL5 403 aaPredicted RBP23.7■■□□□ 1.38
LINC00659-201ENST00000412500 NHSL1Q5SYE7 1610 aa23.7■■□□□ 1.38
LINC00659-201ENST00000412500 ANKRD30BQ9BXX2 1392 aa23.69■■□□□ 1.38
LINC00659-201ENST00000412500 RGL3Q3MIN7 710 aa23.68■■□□□ 1.38
LINC00659-201ENST00000412500 PIK3C2GO75747 1445 aa23.67■■□□□ 1.38
LINC00659-201ENST00000412500 SHPRHQ149N8 1683 aa23.67■■□□□ 1.38
LINC00659-201ENST00000412500 TECPR2O15040 1411 aa23.66■■□□□ 1.38
LINC00659-201ENST00000412500 LRP6O75581 1613 aa23.66■■□□□ 1.38
LINC00659-201ENST00000412500 NRXN1Q9ULB1 1477 aa23.65■■□□□ 1.38
LINC00659-201ENST00000412500 C1orf167Q5SNV9 1468 aa23.64■■□□□ 1.38
LINC00659-201ENST00000412500 LAMC1P11047 1609 aa23.64■■□□□ 1.38
LINC00659-201ENST00000412500 KNDC1Q76NI1 1749 aa23.62■■□□□ 1.37
LINC00659-201ENST00000412500 POTEAQ6S8J7 498 aa23.61■■□□□ 1.37
LINC00659-201ENST00000412500 MYOM2P54296 1465 aa23.61■■□□□ 1.37
LINC00659-201ENST00000412500 SPATA31A6Q5VVP1 1343 aa23.6■■□□□ 1.37
LINC00659-201ENST00000412500 HRCP23327 699 aa23.6■■□□□ 1.37
LINC00659-201ENST00000412500 LRPPRCP42704 1394 aaKnown RBP23.6■■□□□ 1.37
LINC00659-201ENST00000412500 ABCC11Q96J66 1382 aa23.59■■□□□ 1.37
LINC00659-201ENST00000412500 CDC42BPGQ6DT37 1551 aa23.58■■□□□ 1.37
LINC00659-201ENST00000412500 DDX17Q92841 729 aaKnown RBP23.57■■□□□ 1.36
LINC00659-201ENST00000412500 TMEM132EQ6IEE7 984 aa23.55■■□□□ 1.36
LINC00659-201ENST00000412500 C14orf93Q9H972 538 aaKnown RBP23.55■■□□□ 1.36
LINC00659-201ENST00000412500 PLEKHH1Q9ULM0 1364 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms