RNA–Protein interactions for RNA: ENST00000411900.5

PKP4-203, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-203ENST00000411900 ALKQ9UM73 1620 aa15.26■□□□□ 0.03
PKP4-203ENST00000411900 DISP3Q9P2K9 1392 aa15.25■□□□□ 0.03
PKP4-203ENST00000411900 NUTM2DQ5VT03 806 aaPredicted RBP15.25■□□□□ 0.03
PKP4-203ENST00000411900 RIMS2Q9UQ26 1411 aa15.25■□□□□ 0.03
PKP4-203ENST00000411900 SPHKAPQ2M3C7 1700 aa15.24■□□□□ 0.03
PKP4-203ENST00000411900 PPP1R15AO75807 674 aaPredicted RBP15.23■□□□□ 0.03
PKP4-203ENST00000411900 HSPA1LP34931 641 aa15.23■□□□□ 0.03
PKP4-203ENST00000411900 ZFYVE9O95405 1425 aa15.23■□□□□ 0.03
PKP4-203ENST00000411900 RBM33Q96EV2 1170 aaKnown RBP15.22■□□□□ 0.03
PKP4-203ENST00000411900 NAIPQ13075 1403 aa15.22■□□□□ 0.03
PKP4-203ENST00000411900 KCNA6P17658 529 aa15.19■□□□□ 0.02
PKP4-203ENST00000411900 PLEKHG1Q9ULL1 1385 aa15.19■□□□□ 0.02
PKP4-203ENST00000411900 TRIM52Q96A61 297 aa15.18■□□□□ 0.02
PKP4-203ENST00000411900 CHD2O14647 1828 aaKnown RBP15.17■□□□□ 0.02
PKP4-203ENST00000411900 NWD1Q149M9 1564 aa15.17■□□□□ 0.02
PKP4-203ENST00000411900 TMEM94Q12767 1356 aa15.17■□□□□ 0.02
PKP4-203ENST00000411900 HDGFP51858 240 aaKnown RBP15.17■□□□□ 0.02
PKP4-203ENST00000411900 PROSER2Q86WR7 435 aaPredicted RBP15.17■□□□□ 0.02
PKP4-203ENST00000411900 CLTCL1P53675 1640 aa15.17■□□□□ 0.02
PKP4-203ENST00000411900 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.16■□□□□ 0.02
PKP4-203ENST00000411900 HFM1A2PYH4 1435 aa15.16■□□□□ 0.02
PKP4-203ENST00000411900 ILDR2Q71H61 639 aa15.15■□□□□ 0.02
PKP4-203ENST00000411900 ZNF326Q5BKZ1 582 aaKnown RBP15.14■□□□□ 0.01
PKP4-203ENST00000411900 NKTRP30414 1462 aaKnown RBP15.14■□□□□ 0.01
PKP4-203ENST00000411900 KIF1BO60333 1816 aa15.13■□□□□ 0.01
PKP4-203ENST00000411900 ADAMTS13Q76LX8 1427 aa15.13■□□□□ 0.01
PKP4-203ENST00000411900 TRPM2O94759 1503 aa15.12■□□□□ 0.01
PKP4-203ENST00000411900 MED1Q15648 1581 aaPredicted RBP15.11■□□□□ 0.01
PKP4-203ENST00000411900 TBX22Q9Y458 520 aa15.11■□□□□ 0.01
PKP4-203ENST00000411900 DIP2AQ14689 1571 aa15.11■□□□□ 0.01
PKP4-203ENST00000411900 SLC4A1APQ9BWU0 796 aaKnown RBP15.1■□□□□ 0.01
PKP4-203ENST00000411900 NRXN3Q9Y4C0 1643 aa15.1■□□□□ 0.01
PKP4-203ENST00000411900 ROBO1Q9Y6N7 1651 aa15.09■□□□□ 0.01
PKP4-203ENST00000411900 FOXD1Q16676 465 aa15.08■□□□□ 0
PKP4-203ENST00000411900 MSH6P52701 1360 aa15.08■□□□□ 0
PKP4-203ENST00000411900 NEXMIFQ5QGS0 1516 aa15.07■□□□□ 0
PKP4-203ENST00000411900 C14orf37Q86TY3 774 aa15.07■□□□□ 0
PKP4-203ENST00000411900 PTPRUQ92729 1446 aa15.07■□□□□ 0
PKP4-203ENST00000411900 SETBP1Q9Y6X0 1596 aa15.06■□□□□ 0
PKP4-203ENST00000411900 AMOTL2Q9Y2J4 779 aa15.05■□□□□ -0
PKP4-203ENST00000411900 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.04■□□□□ -0
PKP4-203ENST00000411900 FAM135BQ49AJ0 1406 aa15.04■□□□□ -0
PKP4-203ENST00000411900 PIK3R4Q99570 1358 aa15.04■□□□□ -0
PKP4-203ENST00000411900 XRN1Q8IZH2 1706 aaKnown RBP15.03■□□□□ -0
PKP4-203ENST00000411900 METP08581 1390 aa15.02■□□□□ -0
PKP4-203ENST00000411900 SLAIN2Q9P270 581 aa15.02■□□□□ -0
PKP4-203ENST00000411900 PPLO60437 1756 aa15.01□□□□□ -0.01
PKP4-203ENST00000411900 PHLPP1O60346 1717 aa15.01□□□□□ -0.01
PKP4-203ENST00000411900 PHF23Q9BUL5 403 aaPredicted RBP15.01□□□□□ -0.01
PKP4-203ENST00000411900 MPHOSPH9Q99550 1183 aa15□□□□□ -0.01
PKP4-203ENST00000411900 NCOA3Q9Y6Q9 1424 aa14.99□□□□□ -0.01
PKP4-203ENST00000411900 SETD1AO15047 1707 aaKnown RBP14.98□□□□□ -0.01
PKP4-203ENST00000411900 ATF3P18847 181 aa14.98□□□□□ -0.01
PKP4-203ENST00000411900 SOCS7O14512 581 aa14.97□□□□□ -0.01
PKP4-203ENST00000411900 C19orf44Q9H6X5 657 aa14.97□□□□□ -0.01
PKP4-203ENST00000411900 CCDC144AA2RUR9 1427 aa14.97□□□□□ -0.01
PKP4-203ENST00000411900 SETD5Q9C0A6 1442 aa14.97□□□□□ -0.01
PKP4-203ENST00000411900 VGFO15240 615 aaPredicted RBP14.96□□□□□ -0.01
PKP4-203ENST00000411900 RGL3Q3MIN7 710 aa14.96□□□□□ -0.01
PKP4-203ENST00000411900 CADPS2Q86UW7 1296 aa14.96□□□□□ -0.01
PKP4-203ENST00000411900 NALCNQ8IZF0 1738 aa14.95□□□□□ -0.02
PKP4-203ENST00000411900 RAB3GAP2Q9H2M9 1393 aa14.94□□□□□ -0.02
PKP4-203ENST00000411900 IFT172Q9UG01 1749 aa14.94□□□□□ -0.02
PKP4-203ENST00000411900 RPGRIP1LQ68CZ1 1315 aa14.93□□□□□ -0.02
PKP4-203ENST00000411900 COL16A1Q07092 1604 aaPredicted RBP14.93□□□□□ -0.02
PKP4-203ENST00000411900 ADGRF5Q8IZF2 1346 aa14.92□□□□□ -0.02
PKP4-203ENST00000411900 SPATA31E1Q6ZUB1 1445 aa14.91□□□□□ -0.02
PKP4-203ENST00000411900 ROBO2Q9HCK4 1378 aa14.9□□□□□ -0.02
PKP4-203ENST00000411900 BRINP3Q76B58 766 aa14.9□□□□□ -0.02
PKP4-203ENST00000411900 DCCP43146 1447 aa14.9□□□□□ -0.02
PKP4-203ENST00000411900 MST1RQ04912 1400 aa14.9□□□□□ -0.02
PKP4-203ENST00000411900 ADGRL3Q9HAR2 1447 aa14.9□□□□□ -0.02
PKP4-203ENST00000411900 AHDC1Q5TGY3 1603 aaPredicted RBP14.89□□□□□ -0.03
PKP4-203ENST00000411900 RGS17Q9UGC6 210 aaPredicted RBP14.89□□□□□ -0.03
PKP4-203ENST00000411900 JCADQ9P266 1359 aa14.88□□□□□ -0.03
PKP4-203ENST00000411900 ASXL1Q8IXJ9 1541 aa14.88□□□□□ -0.03
PKP4-203ENST00000411900 PTCH1Q13635 1447 aa14.87□□□□□ -0.03
PKP4-203ENST00000411900 STK26Q9P289 416 aa14.87□□□□□ -0.03
PKP4-203ENST00000411900 NHSL1Q5SYE7 1610 aa14.86□□□□□ -0.03
PKP4-203ENST00000411900 DDX17Q92841 729 aaKnown RBP14.86□□□□□ -0.03
PKP4-203ENST00000411900 SHPRHQ149N8 1683 aa14.85□□□□□ -0.03
PKP4-203ENST00000411900 ANKRD30BQ9BXX2 1392 aa14.85□□□□□ -0.03
PKP4-203ENST00000411900 TMEM132EQ6IEE7 984 aa14.84□□□□□ -0.03
PKP4-203ENST00000411900 ACIN1Q9UKV3 1341 aaKnown RBP14.84□□□□□ -0.03
PKP4-203ENST00000411900 LRP6O75581 1613 aa14.84□□□□□ -0.03
PKP4-203ENST00000411900 PIK3C2GO75747 1445 aa14.83□□□□□ -0.04
PKP4-203ENST00000411900 POTEAQ6S8J7 498 aa14.82□□□□□ -0.04
PKP4-203ENST00000411900 C1orf167Q5SNV9 1468 aa14.82□□□□□ -0.04
PKP4-203ENST00000411900 KNDC1Q76NI1 1749 aa14.81□□□□□ -0.04
PKP4-203ENST00000411900 NUTM2BA6NNL0 878 aaPredicted RBP14.81□□□□□ -0.04
PKP4-203ENST00000411900 NUTM2EB1AL46 878 aaPredicted RBP14.81□□□□□ -0.04
PKP4-203ENST00000411900 MEX3CQ5U5Q3 659 aaKnown RBP14.81□□□□□ -0.04
PKP4-203ENST00000411900 WAPLQ7Z5K2 1190 aa14.81□□□□□ -0.04
PKP4-203ENST00000411900 NUTM2AQ8IVF1 878 aaPredicted RBP14.81□□□□□ -0.04
PKP4-203ENST00000411900 ORAI2Q96SN7 254 aa14.81□□□□□ -0.04
PKP4-203ENST00000411900 PRAG1Q86YV5 1406 aa14.81□□□□□ -0.04
PKP4-203ENST00000411900 NUTM2FA1L443 756 aa14.79□□□□□ -0.04
PKP4-203ENST00000411900 LRPPRCP42704 1394 aaKnown RBP14.79□□□□□ -0.04
PKP4-203ENST00000411900 CFAP70Q5T0N1 1121 aa14.79□□□□□ -0.04
PKP4-203ENST00000411900 SPATA31A6Q5VVP1 1343 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms