RNA–Protein interactions for RNA: ENST00000410720.1

RNU6-248P-201, Transcript of RNA, U6 small nuclear 248, pseudogene, humanhuman

BASIC

Gene RNU6-248P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-248P-201ENST00000410720 TSR3Q9UJK0 312 aaKnown RBP8.81□□□□□ -1
RNU6-248P-201ENST00000410720 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.79□□□□□ -1
RNU6-248P-201ENST00000410720 SLF2Q8IX21 1173 aa8.79□□□□□ -1
RNU6-248P-201ENST00000410720 IRF6O14896 467 aa8.78□□□□□ -1
RNU6-248P-201ENST00000410720 CCDC102AQ96A19 550 aa8.78□□□□□ -1
RNU6-248P-201ENST00000410720 TMEM134Q9H6X4 195 aa8.78□□□□□ -1
RNU6-248P-201ENST00000410720 MINK1Q8N4C8 1332 aaPredicted RBP8.77□□□□□ -1.01
RNU6-248P-201ENST00000410720 ZMYND10O75800 440 aa8.76□□□□□ -1.01
RNU6-248P-201ENST00000410720 PHOX2BQ99453 314 aa8.76□□□□□ -1.01
RNU6-248P-201ENST00000410720 BARGINQ6ZT62 677 aa8.74□□□□□ -1.01
RNU6-248P-201ENST00000410720 RDH13Q8NBN7 331 aa8.73□□□□□ -1.01
RNU6-248P-201ENST00000410720 DDX11L8A8MPP1 907 aa8.72□□□□□ -1.01
RNU6-248P-201ENST00000410720 MDM2Q00987 491 aaPredicted RBP8.72□□□□□ -1.01
RNU6-248P-201ENST00000410720 NYAP1Q6ZVC0 841 aa8.72□□□□□ -1.01
RNU6-248P-201ENST00000410720 NECTIN2Q92692 538 aa8.72□□□□□ -1.01
RNU6-248P-201ENST00000410720 APLP1P51693 650 aa8.71□□□□□ -1.02
RNU6-248P-201ENST00000410720 DAXXQ9UER7 740 aaPredicted RBP8.71□□□□□ -1.02
RNU6-248P-201ENST00000410720 CFHP08603 1231 aa8.7□□□□□ -1.02
RNU6-248P-201ENST00000410720 RSPH4AQ5TD94 716 aa8.7□□□□□ -1.02
RNU6-248P-201ENST00000410720 SLC10A3P09131 477 aa8.68□□□□□ -1.02
RNU6-248P-201ENST00000410720 TTLL12Q14166 644 aaPredicted RBP8.68□□□□□ -1.02
RNU6-248P-201ENST00000410720 KMT5BQ4FZB7 885 aa8.68□□□□□ -1.02
RNU6-248P-201ENST00000410720 SLC24A3Q9HC58 644 aa8.68□□□□□ -1.02
RNU6-248P-201ENST00000410720 COPS2P61201 443 aa8.67□□□□□ -1.02
RNU6-248P-201ENST00000410720 SULF1Q8IWU6 871 aa8.67□□□□□ -1.02
RNU6-248P-201ENST00000410720 PRR14Q9BWN1 585 aa8.67□□□□□ -1.02
RNU6-248P-201ENST00000410720 CLCN1P35523 988 aa8.65□□□□□ -1.02
RNU6-248P-201ENST00000410720 AK7Q96M32 723 aa8.65□□□□□ -1.02
RNU6-248P-201ENST00000410720 MTRQ99707 1265 aa8.65□□□□□ -1.02
RNU6-248P-201ENST00000410720 GPCPD1Q9NPB8 672 aa8.65□□□□□ -1.02
RNU6-248P-201ENST00000410720 PCDHB3Q9Y5E6 796 aa8.65□□□□□ -1.02
RNU6-248P-201ENST00000410720 KCNC4Q03721 635 aa8.63□□□□□ -1.03
RNU6-248P-201ENST00000410720 IFFO2Q5TF58 517 aa8.63□□□□□ -1.03
RNU6-248P-201ENST00000410720 TRIM66O15016 1216 aa8.62□□□□□ -1.03
RNU6-248P-201ENST00000410720 BLOC1S3Q6QNY0 202 aa8.62□□□□□ -1.03
RNU6-248P-201ENST00000410720 ACTN4O43707 911 aaKnown RBP8.61□□□□□ -1.03
RNU6-248P-201ENST00000410720 PUS10Q3MIT2 529 aaKnown RBP8.61□□□□□ -1.03
RNU6-248P-201ENST00000410720 IL21Q9HBE4 155 aa8.61□□□□□ -1.03
RNU6-248P-201ENST00000410720 ITGBL1O95965 494 aaPredicted RBP8.6□□□□□ -1.03
RNU6-248P-201ENST00000410720 TJAP1Q5JTD0 557 aa8.6□□□□□ -1.03
RNU6-248P-201ENST00000410720 ZNF516Q92618 1163 aa8.6□□□□□ -1.03
RNU6-248P-201ENST00000410720 REPIN1Q9BWE0 567 aaKnown RBP8.6□□□□□ -1.03
RNU6-248P-201ENST00000410720 GCGRP47871 477 aa8.59□□□□□ -1.03
RNU6-248P-201ENST00000410720 FUT2Q10981 343 aa8.59□□□□□ -1.03
RNU6-248P-201ENST00000410720 AMHR2Q16671 573 aa8.59□□□□□ -1.03
RNU6-248P-201ENST00000410720 TPRNQ4KMQ1 711 aa8.59□□□□□ -1.03
RNU6-248P-201ENST00000410720 GIGYF2Q6Y7W6 1299 aaKnown RBP8.59□□□□□ -1.03
RNU6-248P-201ENST00000410720 FAM217BQ9NTX9 383 aaPredicted RBP8.59□□□□□ -1.03
RNU6-248P-201ENST00000410720 A0A0G2JS52 829 aa8.58□□□□□ -1.04
RNU6-248P-201ENST00000410720 CD46P15529 392 aa8.58□□□□□ -1.04
RNU6-248P-201ENST00000410720 SSTR3P32745 418 aaPredicted RBP8.57□□□□□ -1.04
RNU6-248P-201ENST00000410720 PDE4DQ08499 809 aa8.57□□□□□ -1.04
RNU6-248P-201ENST00000410720 PARP9Q8IXQ6 854 aa8.57□□□□□ -1.04
RNU6-248P-201ENST00000410720 TLL1O43897 1013 aa8.56□□□□□ -1.04
RNU6-248P-201ENST00000410720 ZPR1O75312 459 aa8.56□□□□□ -1.04
RNU6-248P-201ENST00000410720 NKX2-3Q8TAU0 364 aa8.56□□□□□ -1.04
RNU6-248P-201ENST00000410720 KDM4AO75164 1064 aa8.55□□□□□ -1.04
RNU6-248P-201ENST00000410720 NR1I2O75469 434 aa8.55□□□□□ -1.04
RNU6-248P-201ENST00000410720 NUTM1Q86Y26 1132 aa8.55□□□□□ -1.04
RNU6-248P-201ENST00000410720 TMUB1Q9BVT8 246 aa8.55□□□□□ -1.04
RNU6-248P-201ENST00000410720 ATP6V1AP38606 617 aa8.54□□□□□ -1.04
RNU6-248P-201ENST00000410720 GRIPAP1Q4V328 841 aa8.54□□□□□ -1.04
RNU6-248P-201ENST00000410720 RGS20O76081 388 aa8.52□□□□□ -1.05
RNU6-248P-201ENST00000410720 SCUBE3Q8IX30 993 aa8.52□□□□□ -1.05
RNU6-248P-201ENST00000410720 BEGAINQ9BUH8 593 aa8.52□□□□□ -1.05
RNU6-248P-201ENST00000410720 MS4A1P11836 297 aa8.51□□□□□ -1.05
RNU6-248P-201ENST00000410720 MORN1Q5T089 497 aa8.51□□□□□ -1.05
RNU6-248P-201ENST00000410720 HLA-CQ95604 372 aa8.51□□□□□ -1.05
RNU6-248P-201ENST00000410720 SLC27A5Q9Y2P5 690 aa8.51□□□□□ -1.05
RNU6-248P-201ENST00000410720 HOXA2O43364 376 aa8.49□□□□□ -1.05
RNU6-248P-201ENST00000410720 GUCA2AQ02747 115 aa8.49□□□□□ -1.05
RNU6-248P-201ENST00000410720 PPP1R18Q6NYC8 613 aa8.49□□□□□ -1.05
RNU6-248P-201ENST00000410720 GPBP1L1Q9HC44 474 aaPredicted RBP8.49□□□□□ -1.05
RNU6-248P-201ENST00000410720 GGCXP38435 758 aa8.48□□□□□ -1.05
RNU6-248P-201ENST00000410720 USP46P62068 366 aa8.48□□□□□ -1.05
RNU6-248P-201ENST00000410720 SPSB2Q99619 263 aa8.48□□□□□ -1.05
RNU6-248P-201ENST00000410720 FMNL1O95466 1100 aaPredicted RBP8.47□□□□□ -1.05
RNU6-248P-201ENST00000410720 ADH1BP00325 375 aa8.47□□□□□ -1.05
RNU6-248P-201ENST00000410720 SPIRE2Q8WWL2 714 aa8.47□□□□□ -1.05
RNU6-248P-201ENST00000410720 S1PR4O95977 384 aa8.46□□□□□ -1.06
RNU6-248P-201ENST00000410720 PRKCSHP14314 528 aaPredicted RBP8.46□□□□□ -1.06
RNU6-248P-201ENST00000410720 RNF19BQ6ZMZ0 732 aa8.46□□□□□ -1.06
RNU6-248P-201ENST00000410720 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.46□□□□□ -1.06
RNU6-248P-201ENST00000410720 NDUFV2P19404 249 aa8.45□□□□□ -1.06
RNU6-248P-201ENST00000410720 NEUROD2Q15784 382 aa8.45□□□□□ -1.06
RNU6-248P-201ENST00000410720 TBC1D2Q9BYX2 928 aa8.45□□□□□ -1.06
RNU6-248P-201ENST00000410720 SLC6A16Q9GZN6 736 aa8.45□□□□□ -1.06
RNU6-248P-201ENST00000410720 KDM4CQ9H3R0 1056 aa8.45□□□□□ -1.06
RNU6-248P-201ENST00000410720 PPEF1O14829 653 aaPredicted RBP8.44□□□□□ -1.06
RNU6-248P-201ENST00000410720 Q3C1V9 767 aa8.44□□□□□ -1.06
RNU6-248P-201ENST00000410720 MOXD2PA6NHM9 499 aa8.43□□□□□ -1.06
RNU6-248P-201ENST00000410720 FDX1P10109 184 aa8.43□□□□□ -1.06
RNU6-248P-201ENST00000410720 SYMPKQ92797 1274 aaKnown RBP8.43□□□□□ -1.06
RNU6-248P-201ENST00000410720 PRDM9Q9NQV7 894 aa8.43□□□□□ -1.06
RNU6-248P-201ENST00000410720 C6orf229H3BNL8 230 aa8.42□□□□□ -1.06
RNU6-248P-201ENST00000410720 CSPP1Q1MSJ5 1256 aa8.42□□□□□ -1.06
RNU6-248P-201ENST00000410720 BRICD5Q6PL45 260 aa8.42□□□□□ -1.06
RNU6-248P-201ENST00000410720 THAP11Q96EK4 314 aa8.42□□□□□ -1.06
RNU6-248P-201ENST00000410720 ATP1B4Q9UN42 357 aaPredicted RBP8.42□□□□□ -1.06
RNU6-248P-201ENST00000410720 RNF223E7ERA6 249 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms