RNA–Protein interactions for RNA: ENST00000409704.6

ITM2C-204, Transcript of integral membrane protein 2C, humanhuman

TSL 5 BASIC

Gene ITM2C, Length 1,106 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-204ENST00000409704 CLTCL1P53675 1640 aa27.08■■□□□ 1.93
ITM2C-204ENST00000409704 ALKQ9UM73 1620 aa27.08■■□□□ 1.93
ITM2C-204ENST00000409704 PLEKHG1Q9ULL1 1385 aa27.06■■□□□ 1.92
ITM2C-204ENST00000409704 CHGAP10645 457 aaKnown RBP27.03■■□□□ 1.92
ITM2C-204ENST00000409704 DIP2AQ14689 1571 aa27.02■■□□□ 1.92
ITM2C-204ENST00000409704 NKTRP30414 1462 aaKnown RBP27■■□□□ 1.91
ITM2C-204ENST00000409704 SLC26A8Q96RN1 970 aa27■■□□□ 1.91
ITM2C-204ENST00000409704 KIF1BO60333 1816 aa27■■□□□ 1.91
ITM2C-204ENST00000409704 PPP1R15AO75807 674 aaPredicted RBP26.99■■□□□ 1.91
ITM2C-204ENST00000409704 CHD2O14647 1828 aaKnown RBP26.99■■□□□ 1.91
ITM2C-204ENST00000409704 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.97■■□□□ 1.91
ITM2C-204ENST00000409704 TOM1O60784 492 aa26.96■■□□□ 1.91
ITM2C-204ENST00000409704 HDGFP51858 240 aaKnown RBP26.96■■□□□ 1.91
ITM2C-204ENST00000409704 TRIM52Q96A61 297 aa26.96■■□□□ 1.91
ITM2C-204ENST00000409704 NRXN3Q9Y4C0 1643 aa26.95■■□□□ 1.91
ITM2C-204ENST00000409704 ADAMTS13Q76LX8 1427 aa26.95■■□□□ 1.9
ITM2C-204ENST00000409704 NEXMIFQ5QGS0 1516 aa26.94■■□□□ 1.9
ITM2C-204ENST00000409704 KCNA6P17658 529 aa26.93■■□□□ 1.9
ITM2C-204ENST00000409704 BCANQ96GW7 911 aa26.93■■□□□ 1.9
ITM2C-204ENST00000409704 SETBP1Q9Y6X0 1596 aa26.92■■□□□ 1.9
ITM2C-204ENST00000409704 SENP3Q9H4L4 574 aaPredicted RBP26.91■■□□□ 1.9
ITM2C-204ENST00000409704 SCAF1Q9H7N4 1312 aaKnown RBP26.9■■□□□ 1.9
ITM2C-204ENST00000409704 PIP4K2BP78356 416 aa26.9■■□□□ 1.9
ITM2C-204ENST00000409704 SLC4A1APQ9BWU0 796 aaKnown RBP26.9■■□□□ 1.9
ITM2C-204ENST00000409704 TMEM94Q12767 1356 aa26.89■■□□□ 1.9
ITM2C-204ENST00000409704 NUTM2DQ5VT03 806 aaPredicted RBP26.89■■□□□ 1.9
ITM2C-204ENST00000409704 TBX22Q9Y458 520 aa26.85■■□□□ 1.89
ITM2C-204ENST00000409704 XRN1Q8IZH2 1706 aaKnown RBP26.84■■□□□ 1.89
ITM2C-204ENST00000409704 PIK3R4Q99570 1358 aa26.84■■□□□ 1.89
ITM2C-204ENST00000409704 ZNF326Q5BKZ1 582 aaKnown RBP26.83■■□□□ 1.89
ITM2C-204ENST00000409704 SETD5Q9C0A6 1442 aa26.82■■□□□ 1.88
ITM2C-204ENST00000409704 PPLO60437 1756 aa26.82■■□□□ 1.88
ITM2C-204ENST00000409704 PROSER2Q86WR7 435 aaPredicted RBP26.8■■□□□ 1.88
ITM2C-204ENST00000409704 HSPA1LP34931 641 aa26.79■■□□□ 1.88
ITM2C-204ENST00000409704 SETD1AO15047 1707 aaKnown RBP26.79■■□□□ 1.88
ITM2C-204ENST00000409704 PTPRUQ92729 1446 aa26.78■■□□□ 1.88
ITM2C-204ENST00000409704 FOXD1Q16676 465 aa26.77■■□□□ 1.88
ITM2C-204ENST00000409704 RBM33Q96EV2 1170 aaKnown RBP26.76■■□□□ 1.87
ITM2C-204ENST00000409704 IFT172Q9UG01 1749 aa26.76■■□□□ 1.87
ITM2C-204ENST00000409704 ROBO1Q9Y6N7 1651 aa26.76■■□□□ 1.87
ITM2C-204ENST00000409704 CCDC144AA2RUR9 1427 aa26.75■■□□□ 1.87
ITM2C-204ENST00000409704 MSH6P52701 1360 aa26.75■■□□□ 1.87
ITM2C-204ENST00000409704 RAB3GAP2Q9H2M9 1393 aa26.75■■□□□ 1.87
ITM2C-204ENST00000409704 MPHOSPH9Q99550 1183 aa26.74■■□□□ 1.87
ITM2C-204ENST00000409704 NCOA3Q9Y6Q9 1424 aa26.73■■□□□ 1.87
ITM2C-204ENST00000409704 ACIN1Q9UKV3 1341 aaKnown RBP26.73■■□□□ 1.87
ITM2C-204ENST00000409704 DISP3Q9P2K9 1392 aa26.72■■□□□ 1.87
ITM2C-204ENST00000409704 MED1Q15648 1581 aaPredicted RBP26.71■■□□□ 1.87
ITM2C-204ENST00000409704 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.71■■□□□ 1.87
ITM2C-204ENST00000409704 FAM135BQ49AJ0 1406 aa26.7■■□□□ 1.86
ITM2C-204ENST00000409704 SPATA31E1Q6ZUB1 1445 aa26.69■■□□□ 1.86
ITM2C-204ENST00000409704 METP08581 1390 aa26.69■■□□□ 1.86
ITM2C-204ENST00000409704 RPGRIP1LQ68CZ1 1315 aa26.67■■□□□ 1.86
ITM2C-204ENST00000409704 AMOTL2Q9Y2J4 779 aa26.66■■□□□ 1.86
ITM2C-204ENST00000409704 NALCNQ8IZF0 1738 aa26.64■■□□□ 1.85
ITM2C-204ENST00000409704 VGFO15240 615 aaPredicted RBP26.62■■□□□ 1.85
ITM2C-204ENST00000409704 DCCP43146 1447 aa26.6■■□□□ 1.85
ITM2C-204ENST00000409704 PRAG1Q86YV5 1406 aa26.6■■□□□ 1.85
ITM2C-204ENST00000409704 PTCH1Q13635 1447 aa26.59■■□□□ 1.85
ITM2C-204ENST00000409704 C14orf37Q86TY3 774 aa26.59■■□□□ 1.85
ITM2C-204ENST00000409704 PHLPP1O60346 1717 aa26.59■■□□□ 1.85
ITM2C-204ENST00000409704 ANKRD30BQ9BXX2 1392 aa26.56■■□□□ 1.84
ITM2C-204ENST00000409704 ADGRL3Q9HAR2 1447 aa26.56■■□□□ 1.84
ITM2C-204ENST00000409704 C19orf44Q9H6X5 657 aa26.54■■□□□ 1.84
ITM2C-204ENST00000409704 SLAIN2Q9P270 581 aa26.54■■□□□ 1.84
ITM2C-204ENST00000409704 ASXL1Q8IXJ9 1541 aa26.54■■□□□ 1.84
ITM2C-204ENST00000409704 COL16A1Q07092 1604 aaPredicted RBP26.54■■□□□ 1.84
ITM2C-204ENST00000409704 CADPS2Q86UW7 1296 aa26.53■■□□□ 1.84
ITM2C-204ENST00000409704 PIK3C2GO75747 1445 aa26.53■■□□□ 1.84
ITM2C-204ENST00000409704 RGL3Q3MIN7 710 aa26.52■■□□□ 1.84
ITM2C-204ENST00000409704 AHDC1Q5TGY3 1603 aaPredicted RBP26.52■■□□□ 1.84
ITM2C-204ENST00000409704 KNDC1Q76NI1 1749 aa26.52■■□□□ 1.84
ITM2C-204ENST00000409704 ADGRF5Q8IZF2 1346 aa26.52■■□□□ 1.84
ITM2C-204ENST00000409704 MYOM2P54296 1465 aa26.51■■□□□ 1.83
ITM2C-204ENST00000409704 LAMC1P11047 1609 aa26.5■■□□□ 1.83
ITM2C-204ENST00000409704 ATF3P18847 181 aa26.5■■□□□ 1.83
ITM2C-204ENST00000409704 NRXN1Q9ULB1 1477 aa26.49■■□□□ 1.83
ITM2C-204ENST00000409704 MST1RQ04912 1400 aa26.48■■□□□ 1.83
ITM2C-204ENST00000409704 ROBO2Q9HCK4 1378 aa26.48■■□□□ 1.83
ITM2C-204ENST00000409704 HRCP23327 699 aa26.48■■□□□ 1.83
ITM2C-204ENST00000409704 ILDR2Q71H61 639 aa26.48■■□□□ 1.83
ITM2C-204ENST00000409704 NHSL1Q5SYE7 1610 aa26.46■■□□□ 1.83
ITM2C-204ENST00000409704 TECPR2O15040 1411 aa26.44■■□□□ 1.82
ITM2C-204ENST00000409704 CDC42BPGQ6DT37 1551 aa26.41■■□□□ 1.82
ITM2C-204ENST00000409704 SHPRHQ149N8 1683 aa26.41■■□□□ 1.82
ITM2C-204ENST00000409704 LRPPRCP42704 1394 aaKnown RBP26.39■■□□□ 1.82
ITM2C-204ENST00000409704 BRINP3Q76B58 766 aa26.39■■□□□ 1.82
ITM2C-204ENST00000409704 JCADQ9P266 1359 aa26.37■■□□□ 1.81
ITM2C-204ENST00000409704 C1orf167Q5SNV9 1468 aa26.36■■□□□ 1.81
ITM2C-204ENST00000409704 PHF23Q9BUL5 403 aaPredicted RBP26.35■■□□□ 1.81
ITM2C-204ENST00000409704 YTHDC2Q9H6S0 1430 aaKnown RBP26.35■■□□□ 1.81
ITM2C-204ENST00000409704 ABCC11Q96J66 1382 aa26.33■■□□□ 1.81
ITM2C-204ENST00000409704 ADGRB1O14514 1584 aa26.3■■□□□ 1.8
ITM2C-204ENST00000409704 TMEM132EQ6IEE7 984 aa26.3■■□□□ 1.8
ITM2C-204ENST00000409704 FMN2Q9NZ56 1722 aa26.29■■□□□ 1.8
ITM2C-204ENST00000409704 C14orf93Q9H972 538 aaKnown RBP26.29■■□□□ 1.8
ITM2C-204ENST00000409704 STK26Q9P289 416 aa26.29■■□□□ 1.8
ITM2C-204ENST00000409704 PLEKHH1Q9ULM0 1364 aa26.28■■□□□ 1.8
ITM2C-204ENST00000409704 LRP6O75581 1613 aa26.28■■□□□ 1.8
ITM2C-204ENST00000409704 DLC1Q96QB1 1528 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms