RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 APLP2Q06481 763 aa26.49■■□□□ 1.83
SCRN1-203ENST00000409570 ADGRL2O95490 1459 aa26.48■■□□□ 1.83
SCRN1-203ENST00000409570 SLC52A1Q9NWF4 448 aa26.47■■□□□ 1.83
SCRN1-203ENST00000409570 PHLPP1O60346 1717 aa26.46■■□□□ 1.83
SCRN1-203ENST00000409570 GCC2Q8IWJ2 1684 aa26.45■■□□□ 1.82
SCRN1-203ENST00000409570 RPRD2Q5VT52 1461 aaKnown RBP26.43■■□□□ 1.82
SCRN1-203ENST00000409570 ZFYVE9O95405 1425 aa26.43■■□□□ 1.82
SCRN1-203ENST00000409570 MSH6P52701 1360 aa26.43■■□□□ 1.82
SCRN1-203ENST00000409570 BCANQ96GW7 911 aa26.41■■□□□ 1.82
SCRN1-203ENST00000409570 TMEM131LA2VDJ0 1609 aa26.4■■□□□ 1.82
SCRN1-203ENST00000409570 PLEKHG1Q9ULL1 1385 aa26.4■■□□□ 1.82
SCRN1-203ENST00000409570 SLAIN2Q9P270 581 aa26.39■■□□□ 1.82
SCRN1-203ENST00000409570 SETD1AO15047 1707 aaKnown RBP26.38■■□□□ 1.81
SCRN1-203ENST00000409570 ANKRD50Q9ULJ7 1429 aa26.38■■□□□ 1.81
SCRN1-203ENST00000409570 RIMS2Q9UQ26 1411 aa26.38■■□□□ 1.81
SCRN1-203ENST00000409570 COL16A1Q07092 1604 aaPredicted RBP26.36■■□□□ 1.81
SCRN1-203ENST00000409570 JCADQ9P266 1359 aa26.35■■□□□ 1.81
SCRN1-203ENST00000409570 UNC13BO14795 1591 aa26.32■■□□□ 1.8
SCRN1-203ENST00000409570 PPP1R15AO75807 674 aaPredicted RBP26.31■■□□□ 1.8
SCRN1-203ENST00000409570 FAM50AQ14320 339 aaKnown RBP26.31■■□□□ 1.8
SCRN1-203ENST00000409570 TBX22Q9Y458 520 aa26.31■■□□□ 1.8
SCRN1-203ENST00000409570 E9PCH4 1651 aa26.31■■□□□ 1.8
SCRN1-203ENST00000409570 HDGFP51858 240 aaKnown RBP26.3■■□□□ 1.8
SCRN1-203ENST00000409570 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.3■■□□□ 1.8
SCRN1-203ENST00000409570 NCOA3Q9Y6Q9 1424 aa26.3■■□□□ 1.8
SCRN1-203ENST00000409570 ADAMTS13Q76LX8 1427 aa26.28■■□□□ 1.8
SCRN1-203ENST00000409570 DIP2AQ14689 1571 aa26.26■■□□□ 1.79
SCRN1-203ENST00000409570 LRP6O75581 1613 aa26.25■■□□□ 1.79
SCRN1-203ENST00000409570 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.24■■□□□ 1.79
SCRN1-203ENST00000409570 AHDC1Q5TGY3 1603 aaPredicted RBP26.24■■□□□ 1.79
SCRN1-203ENST00000409570 SHPRHQ149N8 1683 aa26.23■■□□□ 1.79
SCRN1-203ENST00000409570 CHGAP10645 457 aaKnown RBP26.23■■□□□ 1.79
SCRN1-203ENST00000409570 NUTM2DQ5VT03 806 aaPredicted RBP26.22■■□□□ 1.79
SCRN1-203ENST00000409570 IQGAP3Q86VI3 1631 aa26.21■■□□□ 1.79
SCRN1-203ENST00000409570 C14orf37Q86TY3 774 aa26.21■■□□□ 1.79
SCRN1-203ENST00000409570 PIK3R4Q99570 1358 aa26.2■■□□□ 1.79
SCRN1-203ENST00000409570 SPATA31A6Q5VVP1 1343 aa26.2■■□□□ 1.79
SCRN1-203ENST00000409570 CADPS2Q86UW7 1296 aa26.19■■□□□ 1.78
SCRN1-203ENST00000409570 C19orf44Q9H6X5 657 aa26.18■■□□□ 1.78
SCRN1-203ENST00000409570 TRPM2O94759 1503 aa26.17■■□□□ 1.78
SCRN1-203ENST00000409570 ATF3P18847 181 aa26.16■■□□□ 1.78
SCRN1-203ENST00000409570 PTPRUQ92729 1446 aa26.15■■□□□ 1.78
SCRN1-203ENST00000409570 MEX3CQ5U5Q3 659 aaKnown RBP26.13■■□□□ 1.77
SCRN1-203ENST00000409570 ROCK1Q13464 1354 aa26.12■■□□□ 1.77
SCRN1-203ENST00000409570 ZNF772Q68DY9 489 aaPredicted RBP26.12■■□□□ 1.77
SCRN1-203ENST00000409570 AMOTL2Q9Y2J4 779 aa26.12■■□□□ 1.77
SCRN1-203ENST00000409570 NRXN3Q9Y4C0 1643 aa26.12■■□□□ 1.77
SCRN1-203ENST00000409570 XRN1Q8IZH2 1706 aaKnown RBP26.11■■□□□ 1.77
SCRN1-203ENST00000409570 BRINP3Q76B58 766 aa26.1■■□□□ 1.77
SCRN1-203ENST00000409570 UPF1Q92900 1129 aaKnown RBP eCLIP26.08■■□□□ 1.77
SCRN1-203ENST00000409570 TRIM52Q96A61 297 aa26.08■■□□□ 1.77
SCRN1-203ENST00000409570 NHSL1Q5SYE7 1610 aa26.07■■□□□ 1.76
SCRN1-203ENST00000409570 DCCP43146 1447 aa26.07■■□□□ 1.76
SCRN1-203ENST00000409570 SPHKAPQ2M3C7 1700 aa26.07■■□□□ 1.76
SCRN1-203ENST00000409570 NUP155O75694 1391 aa26.07■■□□□ 1.76
SCRN1-203ENST00000409570 SETBP1Q9Y6X0 1596 aa26.06■■□□□ 1.76
SCRN1-203ENST00000409570 ASXL1Q8IXJ9 1541 aa26.05■■□□□ 1.76
SCRN1-203ENST00000409570 MST1RQ04912 1400 aa26.03■■□□□ 1.76
SCRN1-203ENST00000409570 NUTM2BA6NNL0 878 aaPredicted RBP26.02■■□□□ 1.76
SCRN1-203ENST00000409570 NUTM2EB1AL46 878 aaPredicted RBP26.02■■□□□ 1.76
SCRN1-203ENST00000409570 NUTM2AQ8IVF1 878 aaPredicted RBP26.02■■□□□ 1.76
SCRN1-203ENST00000409570 SETD5Q9C0A6 1442 aa26.01■■□□□ 1.75
SCRN1-203ENST00000409570 RXRBP28702 533 aa26■■□□□ 1.75
SCRN1-203ENST00000409570 CDK12Q9NYV4 1490 aaPredicted RBP25.99■■□□□ 1.75
SCRN1-203ENST00000409570 NALCNQ8IZF0 1738 aa25.97■■□□□ 1.75
SCRN1-203ENST00000409570 METP08581 1390 aa25.97■■□□□ 1.75
SCRN1-203ENST00000409570 AFF2P51816 1311 aa25.97■■□□□ 1.75
SCRN1-203ENST00000409570 ADGRL3Q9HAR2 1447 aa25.94■■□□□ 1.74
SCRN1-203ENST00000409570 ITGAEP38570 1179 aa25.93■■□□□ 1.74
SCRN1-203ENST00000409570 ZNF326Q5BKZ1 582 aaKnown RBP25.93■■□□□ 1.74
SCRN1-203ENST00000409570 NEXMIFQ5QGS0 1516 aa25.93■■□□□ 1.74
SCRN1-203ENST00000409570 CLTCL1P53675 1640 aa25.92■■□□□ 1.74
SCRN1-203ENST00000409570 LRRC59Q96AG4 307 aaKnown RBP25.92■■□□□ 1.74
SCRN1-203ENST00000409570 DDX17Q92841 729 aaKnown RBP25.91■■□□□ 1.74
SCRN1-203ENST00000409570 KIF1BO60333 1816 aa25.91■■□□□ 1.74
SCRN1-203ENST00000409570 PNPLA6Q8IY17 1366 aa25.9■■□□□ 1.74
SCRN1-203ENST00000409570 LAMC1P11047 1609 aa25.87■■□□□ 1.73
SCRN1-203ENST00000409570 RGS12O14924 1447 aa25.87■■□□□ 1.73
SCRN1-203ENST00000409570 C8orf37Q96NL8 207 aa25.86■■□□□ 1.73
SCRN1-203ENST00000409570 QTRT2Q9H974 415 aaKnown RBP25.84■■□□□ 1.73
SCRN1-203ENST00000409570 RBM6P78332 1123 aaKnown RBP25.83■■□□□ 1.73
SCRN1-203ENST00000409570 C1orf167Q5SNV9 1468 aa25.83■■□□□ 1.73
SCRN1-203ENST00000409570 PTCH1Q13635 1447 aa25.79■■□□□ 1.72
SCRN1-203ENST00000409570 PPARGC1BQ86YN6 1023 aaKnown RBP25.77■■□□□ 1.72
SCRN1-203ENST00000409570 ADAMTS2O95450 1211 aa25.76■■□□□ 1.71
SCRN1-203ENST00000409570 NGLY1Q96IV0 654 aa25.76■■□□□ 1.71
SCRN1-203ENST00000409570 SOS2Q07890 1332 aaPredicted RBP25.76■■□□□ 1.71
SCRN1-203ENST00000409570 ROBO2Q9HCK4 1378 aa25.76■■□□□ 1.71
SCRN1-203ENST00000409570 ORAI2Q96SN7 254 aa25.75■■□□□ 1.71
SCRN1-203ENST00000409570 PRAG1Q86YV5 1406 aa25.73■■□□□ 1.71
SCRN1-203ENST00000409570 PPLO60437 1756 aa25.72■■□□□ 1.71
SCRN1-203ENST00000409570 COL22A1Q8NFW1 1626 aaPredicted RBP25.72■■□□□ 1.71
SCRN1-203ENST00000409570 VGFO15240 615 aaPredicted RBP25.71■■□□□ 1.71
SCRN1-203ENST00000409570 NAIPQ13075 1403 aa25.71■■□□□ 1.71
SCRN1-203ENST00000409570 USP21Q9UK80 565 aa25.68■■□□□ 1.7
SCRN1-203ENST00000409570 MARF1Q9Y4F3 1742 aaKnown RBP25.68■■□□□ 1.7
SCRN1-203ENST00000409570 SRCAPQ6ZRS2 3230 aa25.67■■□□□ 1.7
SCRN1-203ENST00000409570 HFM1A2PYH4 1435 aa25.66■■□□□ 1.7
SCRN1-203ENST00000409570 FNBP4Q8N3X1 1017 aaPredicted RBP25.66■■□□□ 1.7
SCRN1-203ENST00000409570 ATAD2Q6PL18 1390 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms