RNA–Protein interactions for RNA: ENST00000408378.1

MIR548I3-201, Transcript of microRNA 548i-3, humanhuman

BASIC

Gene MIR548I3, Length 149 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548I3-201ENST00000408378 NUDT18Q6ZVK8 323 aa7.97□□□□□ -1.13
MIR548I3-201ENST00000408378 LCE2CQ5TA81 110 aa7.96□□□□□ -1.14
MIR548I3-201ENST00000408378 PCDHB3Q9Y5E6 796 aa7.96□□□□□ -1.14
MIR548I3-201ENST00000408378 S1PR4O95977 384 aa7.95□□□□□ -1.14
MIR548I3-201ENST00000408378 SWT1Q5T5J6 900 aaKnown RBP7.95□□□□□ -1.14
MIR548I3-201ENST00000408378 BLOC1S3Q6QNY0 202 aa7.95□□□□□ -1.14
MIR548I3-201ENST00000408378 ANKLE1Q8NAG6 615 aa7.95□□□□□ -1.14
MIR548I3-201ENST00000408378 AXIN1O15169 862 aa7.94□□□□□ -1.14
MIR548I3-201ENST00000408378 SUZ12Q15022 739 aaKnown RBP7.93□□□□□ -1.14
MIR548I3-201ENST00000408378 NECTIN2Q92692 538 aa7.92□□□□□ -1.14
MIR548I3-201ENST00000408378 SLF2Q8IX21 1173 aa7.91□□□□□ -1.14
MIR548I3-201ENST00000408378 FAM181BA6NEQ2 426 aa7.9□□□□□ -1.14
MIR548I3-201ENST00000408378 PLA2G2CQ5R387 149 aa7.89□□□□□ -1.15
MIR548I3-201ENST00000408378 CRIPAKQ8N1N5 446 aa7.89□□□□□ -1.15
MIR548I3-201ENST00000408378 PKD2L1Q9P0L9 805 aa7.89□□□□□ -1.15
MIR548I3-201ENST00000408378 TERTO14746 1132 aaKnown RBP7.88□□□□□ -1.15
MIR548I3-201ENST00000408378 SNRPBP14678 240 aaKnown RBP7.86□□□□□ -1.15
MIR548I3-201ENST00000408378 SLC4A3P48751 1232 aa7.86□□□□□ -1.15
MIR548I3-201ENST00000408378 CADPS2Q86UW7 1296 aa7.86□□□□□ -1.15
MIR548I3-201ENST00000408378 CERKQ8TCT0 537 aa7.86□□□□□ -1.15
MIR548I3-201ENST00000408378 DNAJC5Q9H3Z4 198 aa7.86□□□□□ -1.15
MIR548I3-201ENST00000408378 PRIM1P49642 420 aaKnown RBP7.85□□□□□ -1.15
MIR548I3-201ENST00000408378 PRR14Q9BWN1 585 aa7.85□□□□□ -1.15
MIR548I3-201ENST00000408378 CDHR5Q9HBB8 845 aa7.85□□□□□ -1.15
MIR548I3-201ENST00000408378 GTPBP6O43824 516 aaPredicted RBP7.84□□□□□ -1.15
MIR548I3-201ENST00000408378 AVPP01185 164 aa7.84□□□□□ -1.15
MIR548I3-201ENST00000408378 CAMK2BQ13554 666 aa7.84□□□□□ -1.15
MIR548I3-201ENST00000408378 CYP4X1Q8N118 509 aa7.84□□□□□ -1.15
MIR548I3-201ENST00000408378 CTC1Q2NKJ3 1217 aa7.82□□□□□ -1.16
MIR548I3-201ENST00000408378 GRXCR2A6NFK2 248 aa7.81□□□□□ -1.16
MIR548I3-201ENST00000408378 ZSCAN1Q8NBB4 408 aa7.81□□□□□ -1.16
MIR548I3-201ENST00000408378 TOR4AQ9NXH8 423 aa7.81□□□□□ -1.16
MIR548I3-201ENST00000408378 ADH1BP00325 375 aa7.8□□□□□ -1.16
MIR548I3-201ENST00000408378 SLC6A16Q9GZN6 736 aa7.8□□□□□ -1.16
MIR548I3-201ENST00000408378 LMOD2Q6P5Q4 547 aa7.79□□□□□ -1.16
MIR548I3-201ENST00000408378 ATP13A2Q9NQ11 1180 aa7.79□□□□□ -1.16
MIR548I3-201ENST00000408378 PADI6Q6TGC4 694 aa7.78□□□□□ -1.16
MIR548I3-201ENST00000408378 TTC24A2A3L6 582 aaPredicted RBP7.77□□□□□ -1.17
MIR548I3-201ENST00000408378 GMPRP36959 345 aa7.77□□□□□ -1.17
MIR548I3-201ENST00000408378 SMCPP49901 116 aaPredicted RBP7.77□□□□□ -1.17
MIR548I3-201ENST00000408378 PDIA6Q15084 440 aa7.76□□□□□ -1.17
MIR548I3-201ENST00000408378 SLC16A10Q8TF71 515 aa7.76□□□□□ -1.17
MIR548I3-201ENST00000408378 TRIM47Q96LD4 638 aa7.76□□□□□ -1.17
MIR548I3-201ENST00000408378 LORP23490 312 aaPredicted RBP7.75□□□□□ -1.17
MIR548I3-201ENST00000408378 RBM27Q9P2N5 1060 aaKnown RBP7.75□□□□□ -1.17
MIR548I3-201ENST00000408378 KMT5BQ4FZB7 885 aa7.74□□□□□ -1.17
MIR548I3-201ENST00000408378 SENP2Q9HC62 589 aa7.74□□□□□ -1.17
MIR548I3-201ENST00000408378 ACTN4O43707 911 aaKnown RBP7.72□□□□□ -1.17
MIR548I3-201ENST00000408378 CFHP08603 1231 aa7.72□□□□□ -1.17
MIR548I3-201ENST00000408378 VEGFBP49765 207 aa7.72□□□□□ -1.17
MIR548I3-201ENST00000408378 KCTD17Q8N5Z5 321 aa7.72□□□□□ -1.17
MIR548I3-201ENST00000408378 NR1I2O75469 434 aa7.71□□□□□ -1.18
MIR548I3-201ENST00000408378 SPDYE16A6NNV3 312 aaPredicted RBP7.7□□□□□ -1.18
MIR548I3-201ENST00000408378 CD2BP2O95400 341 aaKnown RBP7.7□□□□□ -1.18
MIR548I3-201ENST00000408378 TTC13Q8NBP0 860 aa7.7□□□□□ -1.18
MIR548I3-201ENST00000408378 EYA1Q99502 592 aa7.7□□□□□ -1.18
MIR548I3-201ENST00000408378 RPIAP49247 311 aa7.69□□□□□ -1.18
MIR548I3-201ENST00000408378 FCF1Q9Y324 198 aaKnown RBP7.69□□□□□ -1.18
MIR548I3-201ENST00000408378 SMPD1P17405 629 aa7.68□□□□□ -1.18
MIR548I3-201ENST00000408378 IRF7Q92985 503 aa7.67□□□□□ -1.18
MIR548I3-201ENST00000408378 KIFC2Q96AC6 838 aa7.67□□□□□ -1.18
MIR548I3-201ENST00000408378 SPSB2Q99619 263 aa7.67□□□□□ -1.18
MIR548I3-201ENST00000408378 NXF1Q9UBU9 619 aaKnown RBP7.67□□□□□ -1.18
MIR548I3-201ENST00000408378 OSBPP22059 807 aa7.66□□□□□ -1.18
MIR548I3-201ENST00000408378 PUS10Q3MIT2 529 aaKnown RBP7.66□□□□□ -1.18
MIR548I3-201ENST00000408378 SCUBE3Q8IX30 993 aa7.66□□□□□ -1.18
MIR548I3-201ENST00000408378 J3QL48 77 aa7.65□□□□□ -1.18
MIR548I3-201ENST00000408378 DNAJB2P25686 324 aa7.65□□□□□ -1.18
MIR548I3-201ENST00000408378 NPDC1Q9NQX5 325 aaPredicted RBP7.65□□□□□ -1.18
MIR548I3-201ENST00000408378 SNIP1Q8TAD8 396 aaKnown RBP7.63□□□□□ -1.19
MIR548I3-201ENST00000408378 HPS1Q92902 700 aa7.63□□□□□ -1.19
MIR548I3-201ENST00000408378 ERBB4Q15303 1308 aa7.62□□□□□ -1.19
MIR548I3-201ENST00000408378 ZBTB24O43167 697 aaPredicted RBP7.61□□□□□ -1.19
MIR548I3-201ENST00000408378 TMEM134Q9H6X4 195 aa7.61□□□□□ -1.19
MIR548I3-201ENST00000408378 SLC10A3P09131 477 aa7.6□□□□□ -1.19
MIR548I3-201ENST00000408378 MRGPRX2Q96LB1 330 aa7.58□□□□□ -1.2
MIR548I3-201ENST00000408378 WNT7AO00755 349 aa7.57□□□□□ -1.2
MIR548I3-201ENST00000408378 FAM161AQ3B820 660 aa7.57□□□□□ -1.2
MIR548I3-201ENST00000408378 RBM46Q8TBY0 533 aaKnown RBP7.57□□□□□ -1.2
MIR548I3-201ENST00000408378 PRDM9Q9NQV7 894 aa7.57□□□□□ -1.2
MIR548I3-201ENST00000408378 RCCD1A6NED2 376 aa7.56□□□□□ -1.2
MIR548I3-201ENST00000408378 H3BM21 787 aa7.56□□□□□ -1.2
MIR548I3-201ENST00000408378 BMP1P13497 986 aa7.56□□□□□ -1.2
MIR548I3-201ENST00000408378 KCNMA1Q12791 1236 aa7.56□□□□□ -1.2
MIR548I3-201ENST00000408378 TMEM151AQ8N4L1 468 aa7.55□□□□□ -1.2
MIR548I3-201ENST00000408378 GSK3AP49840 483 aa7.54□□□□□ -1.2
MIR548I3-201ENST00000408378 NPAS3Q8IXF0 933 aa7.54□□□□□ -1.2
MIR548I3-201ENST00000408378 GDF11O95390 407 aa7.53□□□□□ -1.2
MIR548I3-201ENST00000408378 DCAF8L2P0C7V8 631 aa7.53□□□□□ -1.2
MIR548I3-201ENST00000408378 XP32Q5T750 250 aa7.53□□□□□ -1.2
MIR548I3-201ENST00000408378 FAM160A2Q8N612 972 aaPredicted RBP7.52□□□□□ -1.21
MIR548I3-201ENST00000408378 TRIM32Q13049 653 aa7.51□□□□□ -1.21
MIR548I3-201ENST00000408378 ADGRG1Q9Y653 693 aa7.51□□□□□ -1.21
MIR548I3-201ENST00000408378 RASSF7Q02833 373 aa7.5□□□□□ -1.21
MIR548I3-201ENST00000408378 E2F4Q16254 413 aa7.5□□□□□ -1.21
MIR548I3-201ENST00000408378 TRIM46Q7Z4K8 759 aa7.5□□□□□ -1.21
MIR548I3-201ENST00000408378 FMNL1O95466 1100 aaPredicted RBP7.49□□□□□ -1.21
MIR548I3-201ENST00000408378 FECHP22830 423 aa7.48□□□□□ -1.21
MIR548I3-201ENST00000408378 THAP11Q96EK4 314 aa7.48□□□□□ -1.21
MIR548I3-201ENST00000408378 ALDH1A1P00352 501 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms