RNA–Protein interactions for RNA: ENST00000407847.4

PRDM6-201, Transcript of PR/SET domain 6, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRDM6, Length 9,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM6-201ENST00000407847 VSIG10Q8N0Z9 540 aa18.17■□□□□ 0.5
PRDM6-201ENST00000407847 MIA2Q96PC5 1412 aa18.17■□□□□ 0.5
PRDM6-201ENST00000407847 SASS6Q6UVJ0 657 aa18.17■□□□□ 0.5
PRDM6-201ENST00000407847 CARMIL1Q5VZK9 1371 aa18.17■□□□□ 0.5
PRDM6-201ENST00000407847 BRMS1Q9HCU9 246 aa18.16■□□□□ 0.5
PRDM6-201ENST00000407847 ZBTB7CA1YPR0 619 aa18.16■□□□□ 0.5
PRDM6-201ENST00000407847 CUX2O14529 1486 aa18.16■□□□□ 0.5
PRDM6-201ENST00000407847 KIAA0754O94854 1291 aa18.16■□□□□ 0.5
PRDM6-201ENST00000407847 MCM3P25205 808 aa18.16■□□□□ 0.5
PRDM6-201ENST00000407847 ERLIN1O75477 346 aa18.15■□□□□ 0.5
PRDM6-201ENST00000407847 TAF7LQ5H9L4 462 aa18.15■□□□□ 0.5
PRDM6-201ENST00000407847 AMER1Q5JTC6 1135 aaPredicted RBP18.15■□□□□ 0.5
PRDM6-201ENST00000407847 NASPP49321 788 aaPredicted RBP18.15■□□□□ 0.5
PRDM6-201ENST00000407847 SAFBQ15424 915 aaKnown RBP eCLIP18.15■□□□□ 0.5
PRDM6-201ENST00000407847 OLFM4Q6UX06 510 aa18.15■□□□□ 0.5
PRDM6-201ENST00000407847 POLR3GO15318 223 aaPredicted RBP18.14■□□□□ 0.5
PRDM6-201ENST00000407847 CCDC73Q6ZRK6 1079 aa18.14■□□□□ 0.5
PRDM6-201ENST00000407847 FEZ1Q99689 392 aa18.14■□□□□ 0.49
PRDM6-201ENST00000407847 XBP1P17861 261 aa18.14■□□□□ 0.49
PRDM6-201ENST00000407847 INTS3Q68E01 1043 aaKnown RBP18.14■□□□□ 0.49
PRDM6-201ENST00000407847 CCAR2Q8N163 923 aaKnown RBP18.14■□□□□ 0.49
PRDM6-201ENST00000407847 U2AF1L5P0DN76 240 aaPredicted RBP18.14■□□□□ 0.49
PRDM6-201ENST00000407847 U2AF1Q01081 240 aaKnown RBP eCLIP18.14■□□□□ 0.49
PRDM6-201ENST00000407847 HIP1O00291 1037 aa18.13■□□□□ 0.49
PRDM6-201ENST00000407847 ZKSCAN2Q63HK3 967 aa18.12■□□□□ 0.49
PRDM6-201ENST00000407847 WASHC2AQ641Q2 1341 aa18.12■□□□□ 0.49
PRDM6-201ENST00000407847 ERC2O15083 957 aa18.12■□□□□ 0.49
PRDM6-201ENST00000407847 MARCH6O60337 910 aa18.12■□□□□ 0.49
PRDM6-201ENST00000407847 STK11IPQ8N1F8 1099 aa18.12■□□□□ 0.49
PRDM6-201ENST00000407847 PSMA5P28066 241 aa18.11■□□□□ 0.49
PRDM6-201ENST00000407847 NOL10Q9BSC4 688 aaKnown RBP18.11■□□□□ 0.49
PRDM6-201ENST00000407847 DEF6Q9H4E7 631 aa18.11■□□□□ 0.49
PRDM6-201ENST00000407847 DHX16O60231 1041 aaKnown RBP18.11■□□□□ 0.49
PRDM6-201ENST00000407847 TSHZ2Q9NRE2 1034 aa18.11■□□□□ 0.49
PRDM6-201ENST00000407847 EZRP15311 586 aaKnown RBP18.1■□□□□ 0.49
PRDM6-201ENST00000407847 SMARCA4P51532 1647 aa18.1■□□□□ 0.49
PRDM6-201ENST00000407847 ODF2Q5BJF6 829 aa18.1■□□□□ 0.49
PRDM6-201ENST00000407847 SPRYD3Q8NCJ5 442 aa18.1■□□□□ 0.49
PRDM6-201ENST00000407847 AEBP2Q6ZN18 517 aaPredicted RBP18.1■□□□□ 0.49
PRDM6-201ENST00000407847 TRDNQ13061 729 aa18.09■□□□□ 0.49
PRDM6-201ENST00000407847 JMYQ8N9B5 988 aa18.09■□□□□ 0.49
PRDM6-201ENST00000407847 HIRIP3Q9BW71 556 aaPredicted RBP18.09■□□□□ 0.49
PRDM6-201ENST00000407847 EPS15P42566 896 aa18.08■□□□□ 0.48
PRDM6-201ENST00000407847 HSPA5P11021 654 aaKnown RBP18.08■□□□□ 0.48
PRDM6-201ENST00000407847 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.08■□□□□ 0.48
PRDM6-201ENST00000407847 DDX11Q96FC9 970 aa18.07■□□□□ 0.48
PRDM6-201ENST00000407847 IFT57Q9NWB7 429 aa18.07■□□□□ 0.48
PRDM6-201ENST00000407847 CPLX1O14810 134 aa18.07■□□□□ 0.48
PRDM6-201ENST00000407847 PDE4AP27815 886 aa18.07■□□□□ 0.48
PRDM6-201ENST00000407847 RRP1P56182 461 aaKnown RBP18.07■□□□□ 0.48
PRDM6-201ENST00000407847 PDS5BQ9NTI5 1447 aa18.07■□□□□ 0.48
PRDM6-201ENST00000407847 HMGB1P09429 215 aaKnown RBP18.07■□□□□ 0.48
PRDM6-201ENST00000407847 DACH1Q9UI36 760 aa18.06■□□□□ 0.48
PRDM6-201ENST00000407847 WIZO95785 1651 aa18.06■□□□□ 0.48
PRDM6-201ENST00000407847 CT47A1Q5JQC4 288 aaPredicted RBP18.06■□□□□ 0.48
PRDM6-201ENST00000407847 NUP155O75694 1391 aa18.05■□□□□ 0.48
PRDM6-201ENST00000407847 ERICH3Q5RHP9 1530 aa18.05■□□□□ 0.48
PRDM6-201ENST00000407847 RAPGEF2Q9Y4G8 1499 aa18.05■□□□□ 0.48
PRDM6-201ENST00000407847 GOLGA6L10A0A0M3HER8 536 aa18.05■□□□□ 0.48
PRDM6-201ENST00000407847 FAM13BQ9NYF5 915 aa18.05■□□□□ 0.48
PRDM6-201ENST00000407847 CT47B1P0C2W7 299 aaPredicted RBP18.05■□□□□ 0.48
PRDM6-201ENST00000407847 CWC22Q9HCG8 908 aaKnown RBP18.05■□□□□ 0.48
PRDM6-201ENST00000407847 ERICH2A1L162 156 aa18.04■□□□□ 0.48
PRDM6-201ENST00000407847 RRBP1Q9P2E9 1410 aaKnown RBP18.04■□□□□ 0.48
PRDM6-201ENST00000407847 POLA1P09884 1462 aaPredicted RBP18.03■□□□□ 0.48
PRDM6-201ENST00000407847 API5Q9BZZ5 524 aaKnown RBP18.03■□□□□ 0.48
PRDM6-201ENST00000407847 TXLNAP40222 546 aa18.03■□□□□ 0.48
PRDM6-201ENST00000407847 DYDC1Q8WWB3 177 aa18.03■□□□□ 0.48
PRDM6-201ENST00000407847 HMGB1P1B2RPK0 211 aaPredicted RBP18.03■□□□□ 0.48
PRDM6-201ENST00000407847 HMGB2P26583 209 aaKnown RBP18.03■□□□□ 0.48
PRDM6-201ENST00000407847 GBP3Q9H0R5 595 aa18.02■□□□□ 0.48
PRDM6-201ENST00000407847 NF2P35240 595 aa18.02■□□□□ 0.48
PRDM6-201ENST00000407847 WASHC2CQ9Y4E1 1318 aa18.02■□□□□ 0.48
PRDM6-201ENST00000407847 FILIP1LQ4L180 1135 aa18.02■□□□□ 0.47
PRDM6-201ENST00000407847 KINO60870 393 aaKnown RBP18.02■□□□□ 0.47
PRDM6-201ENST00000407847 EFCAB5A4FU69 1503 aa18.01■□□□□ 0.47
PRDM6-201ENST00000407847 MAP9Q49MG5 647 aa18.01■□□□□ 0.47
PRDM6-201ENST00000407847 ANKRD1Q15327 319 aa18.01■□□□□ 0.47
PRDM6-201ENST00000407847 PCMTD1Q96MG8 357 aaPredicted RBP18.01■□□□□ 0.47
PRDM6-201ENST00000407847 ZNHIT6Q9NWK9 470 aaKnown RBP18.01■□□□□ 0.47
PRDM6-201ENST00000407847 DDX58O95786 925 aaKnown RBP18.01■□□□□ 0.47
PRDM6-201ENST00000407847 BICD2Q8TD16 824 aa18■□□□□ 0.47
PRDM6-201ENST00000407847 BRD4O60885 1362 aaPredicted RBP18■□□□□ 0.47
PRDM6-201ENST00000407847 EVC2Q86UK5 1308 aa18■□□□□ 0.47
PRDM6-201ENST00000407847 PLEKHH1Q9ULM0 1364 aa18■□□□□ 0.47
PRDM6-201ENST00000407847 NEFHP12036 1026 aa18■□□□□ 0.47
PRDM6-201ENST00000407847 CBFA2T2O43439 604 aa18■□□□□ 0.47
PRDM6-201ENST00000407847 HECW1Q76N89 1606 aa18■□□□□ 0.47
PRDM6-201ENST00000407847 SLC26A8Q96RN1 970 aa18■□□□□ 0.47
PRDM6-201ENST00000407847 CCDC43Q96MW1 224 aaKnown RBP18■□□□□ 0.47
PRDM6-201ENST00000407847 ZNF592Q92610 1267 aa17.99■□□□□ 0.47
PRDM6-201ENST00000407847 ZNF396Q96N95 335 aaPredicted RBP17.99■□□□□ 0.47
PRDM6-201ENST00000407847 CIZ1Q9ULV3 898 aaPredicted RBP17.99■□□□□ 0.47
PRDM6-201ENST00000407847 USP47Q96K76 1375 aa17.99■□□□□ 0.47
PRDM6-201ENST00000407847 STIM1Q13586 685 aa17.99■□□□□ 0.47
PRDM6-201ENST00000407847 SMC3Q9UQE7 1217 aa17.98■□□□□ 0.47
PRDM6-201ENST00000407847 DESP17661 470 aa17.98■□□□□ 0.47
PRDM6-201ENST00000407847 SART3Q15020 963 aaKnown RBP17.98■□□□□ 0.47
PRDM6-201ENST00000407847 CCDC88BA6NC98 1476 aa17.97■□□□□ 0.47
PRDM6-201ENST00000407847 CREBRFQ8IUR6 639 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms