RNA–Protein interactions for RNA: ENST00000399220.2

CX3CR1-202, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CR1, Length 3,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-202ENST00000399220 MYOM1P52179 1685 aa9.62□□□□□ -0.87
CX3CR1-202ENST00000399220 WASHC2CQ9Y4E1 1318 aa9.61□□□□□ -0.87
CX3CR1-202ENST00000399220 CCER2I3L3R5 266 aa9.61□□□□□ -0.87
CX3CR1-202ENST00000399220 ARHGEF28Q8N1W1 1705 aaKnown RBP9.61□□□□□ -0.87
CX3CR1-202ENST00000399220 MIER1Q8N108 512 aa9.61□□□□□ -0.87
CX3CR1-202ENST00000399220 KNDC1Q76NI1 1749 aa9.6□□□□□ -0.87
CX3CR1-202ENST00000399220 UBR1Q8IWV7 1749 aa9.6□□□□□ -0.87
CX3CR1-202ENST00000399220 FER1L4A9Z1Z3 1794 aa9.6□□□□□ -0.87
CX3CR1-202ENST00000399220 KIF7Q2M1P5 1343 aa9.6□□□□□ -0.87
CX3CR1-202ENST00000399220 C3P01024 1663 aa9.59□□□□□ -0.87
CX3CR1-202ENST00000399220 KTN1Q86UP2 1357 aaKnown RBP9.59□□□□□ -0.87
CX3CR1-202ENST00000399220 SLC24A1O60721 1099 aa9.58□□□□□ -0.88
CX3CR1-202ENST00000399220 NRXN3Q9Y4C0 1643 aa9.58□□□□□ -0.88
CX3CR1-202ENST00000399220 CFAP65Q6ZU64 1925 aaKnown RBP9.58□□□□□ -0.88
CX3CR1-202ENST00000399220 C11orf95C9JLR9 678 aaPredicted RBP9.58□□□□□ -0.88
CX3CR1-202ENST00000399220 CARD11Q9BXL7 1154 aa9.58□□□□□ -0.88
CX3CR1-202ENST00000399220 DNAJC5Q9H3Z4 198 aa9.58□□□□□ -0.88
CX3CR1-202ENST00000399220 DLC1Q96QB1 1528 aa9.58□□□□□ -0.88
CX3CR1-202ENST00000399220 QRICH2Q9H0J4 1663 aa9.57□□□□□ -0.88
CX3CR1-202ENST00000399220 A2ML1A8K2U0 1454 aa9.57□□□□□ -0.88
CX3CR1-202ENST00000399220 MYT1LQ9UL68 1186 aa9.57□□□□□ -0.88
CX3CR1-202ENST00000399220 ADAMTSL3P82987 1691 aa9.57□□□□□ -0.88
CX3CR1-202ENST00000399220 ASXL1Q8IXJ9 1541 aa9.57□□□□□ -0.88
CX3CR1-202ENST00000399220 TESK2Q96S53 571 aa9.57□□□□□ -0.88
CX3CR1-202ENST00000399220 ZNF142P52746 1687 aaPredicted RBP9.57□□□□□ -0.88
CX3CR1-202ENST00000399220 USP32Q8NFA0 1604 aa9.57□□□□□ -0.88
CX3CR1-202ENST00000399220 NLRP1Q9C000 1473 aa9.56□□□□□ -0.88
CX3CR1-202ENST00000399220 EIF3AQ14152 1382 aaKnown RBP9.56□□□□□ -0.88
CX3CR1-202ENST00000399220 GGT6Q6P531 493 aa9.56□□□□□ -0.88
CX3CR1-202ENST00000399220 C14orf93Q9H972 538 aaKnown RBP9.55□□□□□ -0.88
CX3CR1-202ENST00000399220 PUS7Q96PZ0 661 aaKnown RBP9.54□□□□□ -0.88
CX3CR1-202ENST00000399220 SLIT1O75093 1534 aa9.54□□□□□ -0.88
CX3CR1-202ENST00000399220 ALKQ9UM73 1620 aa9.54□□□□□ -0.88
CX3CR1-202ENST00000399220 DDX10Q13206 875 aaKnown RBP9.54□□□□□ -0.88
CX3CR1-202ENST00000399220 NBPF1Q3BBV0 1214 aa9.53□□□□□ -0.88
CX3CR1-202ENST00000399220 ZMYM3Q14202 1370 aa9.53□□□□□ -0.88
CX3CR1-202ENST00000399220 ARHGAP23Q9P227 1491 aa9.53□□□□□ -0.88
CX3CR1-202ENST00000399220 ADGRF5Q8IZF2 1346 aa9.52□□□□□ -0.88
CX3CR1-202ENST00000399220 DIP2AQ14689 1571 aa9.52□□□□□ -0.89
CX3CR1-202ENST00000399220 ST20-MTHFSA0A0A6YYL1 179 aa9.52□□□□□ -0.89
CX3CR1-202ENST00000399220 NPC1L1Q9UHC9 1359 aa9.51□□□□□ -0.89
CX3CR1-202ENST00000399220 IDI1Q13907 227 aa9.51□□□□□ -0.89
CX3CR1-202ENST00000399220 RGL3Q3MIN7 710 aa9.51□□□□□ -0.89
CX3CR1-202ENST00000399220 KDM2AQ9Y2K7 1162 aa9.51□□□□□ -0.89
CX3CR1-202ENST00000399220 VGFO15240 615 aaPredicted RBP9.51□□□□□ -0.89
CX3CR1-202ENST00000399220 INSRP06213 1382 aa9.51□□□□□ -0.89
CX3CR1-202ENST00000399220 CPS1P31327 1500 aa9.5□□□□□ -0.89
CX3CR1-202ENST00000399220 PTPRMP28827 1452 aa9.5□□□□□ -0.89
CX3CR1-202ENST00000399220 DISP3Q9P2K9 1392 aa9.5□□□□□ -0.89
CX3CR1-202ENST00000399220 ANP32CO43423 234 aa9.5□□□□□ -0.89
CX3CR1-202ENST00000399220 TECPR2O15040 1411 aa9.5□□□□□ -0.89
CX3CR1-202ENST00000399220 HIRIP3Q9BW71 556 aaPredicted RBP9.49□□□□□ -0.89
CX3CR1-202ENST00000399220 MED14O60244 1454 aa9.49□□□□□ -0.89
CX3CR1-202ENST00000399220 ADGRB2O60241 1585 aa9.49□□□□□ -0.89
CX3CR1-202ENST00000399220 TNRQ92752 1358 aa9.48□□□□□ -0.89
CX3CR1-202ENST00000399220 CDCA8Q53HL2 280 aa9.48□□□□□ -0.89
CX3CR1-202ENST00000399220 TMF1P82094 1093 aa9.47□□□□□ -0.89
CX3CR1-202ENST00000399220 PRKRIP1Q9H875 184 aaPredicted RBP9.47□□□□□ -0.89
CX3CR1-202ENST00000399220 PARD3Q8TEW0 1356 aa9.47□□□□□ -0.89
CX3CR1-202ENST00000399220 RIMS2Q9UQ26 1411 aa9.47□□□□□ -0.89
CX3CR1-202ENST00000399220 TULP4Q9NRJ4 1543 aa9.47□□□□□ -0.89
CX3CR1-202ENST00000399220 RIMS1Q86UR5 1692 aaKnown RBP9.47□□□□□ -0.89
CX3CR1-202ENST00000399220 ANKRD26Q9UPS8 1709 aa9.47□□□□□ -0.89
CX3CR1-202ENST00000399220 PER1O15534 1290 aaPredicted RBP9.47□□□□□ -0.89
CX3CR1-202ENST00000399220 ZNF326Q5BKZ1 582 aaKnown RBP9.47□□□□□ -0.89
CX3CR1-202ENST00000399220 SIRT1Q96EB6 747 aa9.47□□□□□ -0.89
CX3CR1-202ENST00000399220 NINLQ9Y2I6 1382 aa9.45□□□□□ -0.9
CX3CR1-202ENST00000399220 CFAP70Q5T0N1 1121 aa9.45□□□□□ -0.9
CX3CR1-202ENST00000399220 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.45□□□□□ -0.9
CX3CR1-202ENST00000399220 FAM135BQ49AJ0 1406 aa9.45□□□□□ -0.9
CX3CR1-202ENST00000399220 YTHDC2Q9H6S0 1430 aaKnown RBP9.45□□□□□ -0.9
CX3CR1-202ENST00000399220 CENPBP07199 599 aaPredicted RBP9.45□□□□□ -0.9
CX3CR1-202ENST00000399220 CEP170BQ9Y4F5 1589 aaPredicted RBP9.44□□□□□ -0.9
CX3CR1-202ENST00000399220 FBXO31Q5XUX0 539 aaPredicted RBP9.44□□□□□ -0.9
CX3CR1-202ENST00000399220 LRPPRCP42704 1394 aaKnown RBP9.44□□□□□ -0.9
CX3CR1-202ENST00000399220 TMEM2Q9UHN6 1383 aa9.44□□□□□ -0.9
CX3CR1-202ENST00000399220 PLEKHG1Q9ULL1 1385 aa9.44□□□□□ -0.9
CX3CR1-202ENST00000399220 XRN1Q8IZH2 1706 aaKnown RBP9.44□□□□□ -0.9
CX3CR1-202ENST00000399220 ABCC11Q96J66 1382 aa9.44□□□□□ -0.9
CX3CR1-202ENST00000399220 RALBP1Q15311 655 aa9.43□□□□□ -0.9
CX3CR1-202ENST00000399220 TOPAZ1Q8N9V7 1692 aa9.43□□□□□ -0.9
CX3CR1-202ENST00000399220 BRD4O60885 1362 aaPredicted RBP9.43□□□□□ -0.9
CX3CR1-202ENST00000399220 CENPJQ9HC77 1338 aaPredicted RBP9.42□□□□□ -0.9
CX3CR1-202ENST00000399220 ADAMTS13Q76LX8 1427 aa9.41□□□□□ -0.9
CX3CR1-202ENST00000399220 AKAP12Q02952 1782 aa9.4□□□□□ -0.9
CX3CR1-202ENST00000399220 HDGFP51858 240 aaKnown RBP9.4□□□□□ -0.9
CX3CR1-202ENST00000399220 SETD1BQ9UPS6 1966 aaKnown RBP9.4□□□□□ -0.9
CX3CR1-202ENST00000399220 MON2Q7Z3U7 1717 aa9.39□□□□□ -0.91
CX3CR1-202ENST00000399220 MYBBP1AQ9BQG0 1328 aaKnown RBP9.39□□□□□ -0.91
CX3CR1-202ENST00000399220 KIF20BQ96Q89 1820 aa9.39□□□□□ -0.91
CX3CR1-202ENST00000399220 PIK3R4Q99570 1358 aa9.39□□□□□ -0.91
CX3CR1-202ENST00000399220 PTCH1Q13635 1447 aa9.39□□□□□ -0.91
CX3CR1-202ENST00000399220 CHD2O14647 1828 aaKnown RBP9.38□□□□□ -0.91
CX3CR1-202ENST00000399220 USP54Q70EL1 1684 aa9.38□□□□□ -0.91
CX3CR1-202ENST00000399220 NSD2O96028 1365 aa9.38□□□□□ -0.91
CX3CR1-202ENST00000399220 ESF1Q9H501 851 aaKnown RBP9.38□□□□□ -0.91
CX3CR1-202ENST00000399220 ATP7BP35670 1465 aa9.37□□□□□ -0.91
CX3CR1-202ENST00000399220 CDC42BPGQ6DT37 1551 aa9.37□□□□□ -0.91
CX3CR1-202ENST00000399220 NWD1Q149M9 1564 aa9.37□□□□□ -0.91
CX3CR1-202ENST00000399220 NRKQ7Z2Y5 1582 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms