RNA–Protein interactions for RNA: ENST00000397495.8

PPM1F-202, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 2 BASIC

Gene PPM1F, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-202ENST00000397495 STAC3Q96MF2 364 aa21.54■■□□□ 1.04
PPM1F-202ENST00000397495 DDX10Q13206 875 aaKnown RBP21.53■■□□□ 1.04
PPM1F-202ENST00000397495 MYOM2P54296 1465 aa21.52■■□□□ 1.04
PPM1F-202ENST00000397495 RPGRIP1LQ68CZ1 1315 aa21.52■■□□□ 1.04
PPM1F-202ENST00000397495 ADGRF5Q8IZF2 1346 aa21.51■■□□□ 1.03
PPM1F-202ENST00000397495 ROCK2O75116 1388 aaKnown RBP21.51■■□□□ 1.03
PPM1F-202ENST00000397495 NEXMIFQ5QGS0 1516 aa21.51■■□□□ 1.03
PPM1F-202ENST00000397495 EIF4G2P78344 907 aaKnown RBP eCLIP21.5■■□□□ 1.03
PPM1F-202ENST00000397495 NUTM2DQ5VT03 806 aaPredicted RBP21.5■■□□□ 1.03
PPM1F-202ENST00000397495 CARD11Q9BXL7 1154 aa21.49■■□□□ 1.03
PPM1F-202ENST00000397495 HSPA5P11021 654 aaKnown RBP21.48■■□□□ 1.03
PPM1F-202ENST00000397495 NBPF1Q3BBV0 1214 aa21.48■■□□□ 1.03
PPM1F-202ENST00000397495 A2ML1A8K2U0 1454 aa21.48■■□□□ 1.03
PPM1F-202ENST00000397495 KDM4FA0A1W2PPD8 638 aa21.46■■□□□ 1.03
PPM1F-202ENST00000397495 YTHDC1Q96MU7 727 aaKnown RBP21.46■■□□□ 1.03
PPM1F-202ENST00000397495 POLR1AO95602 1720 aaPredicted RBP21.45■■□□□ 1.03
PPM1F-202ENST00000397495 NRXN1Q9ULB1 1477 aa21.45■■□□□ 1.02
PPM1F-202ENST00000397495 VGFO15240 615 aaPredicted RBP21.45■■□□□ 1.02
PPM1F-202ENST00000397495 NLRP1Q9C000 1473 aa21.45■■□□□ 1.02
PPM1F-202ENST00000397495 UBR1Q8IWV7 1749 aa21.44■■□□□ 1.02
PPM1F-202ENST00000397495 CCER2I3L3R5 266 aa21.44■■□□□ 1.02
PPM1F-202ENST00000397495 USP47Q96K76 1375 aa21.43■■□□□ 1.02
PPM1F-202ENST00000397495 KIAA1210Q9ULL0 1709 aa21.43■■□□□ 1.02
PPM1F-202ENST00000397495 KDM5AP29375 1690 aaKnown RBP21.42■■□□□ 1.02
PPM1F-202ENST00000397495 CFAP70Q5T0N1 1121 aa21.42■■□□□ 1.02
PPM1F-202ENST00000397495 MYO3AQ8NEV4 1616 aa21.42■■□□□ 1.02
PPM1F-202ENST00000397495 PIK3C2GO75747 1445 aa21.41■■□□□ 1.02
PPM1F-202ENST00000397495 GPRASP1Q5JY77 1395 aa21.41■■□□□ 1.02
PPM1F-202ENST00000397495 SENP3Q9H4L4 574 aaPredicted RBP21.41■■□□□ 1.02
PPM1F-202ENST00000397495 LAMC1P11047 1609 aa21.41■■□□□ 1.02
PPM1F-202ENST00000397495 RIMS2Q9UQ26 1411 aa21.4■■□□□ 1.02
PPM1F-202ENST00000397495 WASHC2AQ641Q2 1341 aa21.4■■□□□ 1.02
PPM1F-202ENST00000397495 PTPRMP28827 1452 aa21.39■■□□□ 1.01
PPM1F-202ENST00000397495 ZFYVE9O95405 1425 aa21.39■■□□□ 1.01
PPM1F-202ENST00000397495 ANP32CO43423 234 aa21.36■■□□□ 1.01
PPM1F-202ENST00000397495 C14orf93Q9H972 538 aaKnown RBP21.36■■□□□ 1.01
PPM1F-202ENST00000397495 GTF3C3Q9Y5Q9 886 aa21.35■■□□□ 1.01
PPM1F-202ENST00000397495 CCDC7Q96M83 1385 aa21.34■■□□□ 1.01
PPM1F-202ENST00000397495 TMEM2Q9UHN6 1383 aa21.34■■□□□ 1.01
PPM1F-202ENST00000397495 SETD1BQ9UPS6 1966 aaKnown RBP21.34■■□□□ 1.01
PPM1F-202ENST00000397495 IQGAP1P46940 1657 aa21.34■■□□□ 1.01
PPM1F-202ENST00000397495 CEP170BQ9Y4F5 1589 aaPredicted RBP21.33■■□□□ 1.01
PPM1F-202ENST00000397495 ST20-MTHFSA0A0A6YYL1 179 aa21.33■■□□□ 1.01
PPM1F-202ENST00000397495 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.33■■□□□ 1.01
PPM1F-202ENST00000397495 SETBP1Q9Y6X0 1596 aa21.32■■□□□ 1
PPM1F-202ENST00000397495 HDGFP51858 240 aaKnown RBP21.31■■□□□ 1
PPM1F-202ENST00000397495 TMEM132EQ6IEE7 984 aa21.31■■□□□ 1
PPM1F-202ENST00000397495 SCAF11Q99590 1463 aaKnown RBP21.3■■□□□ 1
PPM1F-202ENST00000397495 THEMISQ8N1K5 641 aaPredicted RBP21.3■■□□□ 1
PPM1F-202ENST00000397495 ADGRB1O14514 1584 aa21.29■■□□□ 1
PPM1F-202ENST00000397495 ZNF142P52746 1687 aaPredicted RBP21.29■■□□□ 1
PPM1F-202ENST00000397495 C11orf95C9JLR9 678 aaPredicted RBP21.28■■□□□ 1
PPM1F-202ENST00000397495 ALKQ9UM73 1620 aa21.28■■□□□ 1
PPM1F-202ENST00000397495 SLIT1O75093 1534 aa21.27■□□□□ 0.99
PPM1F-202ENST00000397495 LTKP29376 864 aa21.26■□□□□ 0.99
PPM1F-202ENST00000397495 TXNDC2Q86VQ3 553 aa21.26■□□□□ 0.99
PPM1F-202ENST00000397495 BCANQ96GW7 911 aa21.25■□□□□ 0.99
PPM1F-202ENST00000397495 EID1Q9Y6B2 187 aa21.25■□□□□ 0.99
PPM1F-202ENST00000397495 ARHGAP23Q9P227 1491 aa21.25■□□□□ 0.99
PPM1F-202ENST00000397495 NRXN3Q9Y4C0 1643 aa21.25■□□□□ 0.99
PPM1F-202ENST00000397495 ASXL1Q8IXJ9 1541 aa21.24■□□□□ 0.99
PPM1F-202ENST00000397495 EIF3AQ14152 1382 aaKnown RBP21.23■□□□□ 0.99
PPM1F-202ENST00000397495 TRAK1Q9UPV9 953 aa21.23■□□□□ 0.99
PPM1F-202ENST00000397495 KIF7Q2M1P5 1343 aa21.23■□□□□ 0.99
PPM1F-202ENST00000397495 SETD1AO15047 1707 aaKnown RBP21.22■□□□□ 0.99
PPM1F-202ENST00000397495 TESK2Q96S53 571 aa21.2■□□□□ 0.99
PPM1F-202ENST00000397495 POLR3GLQ9BT43 218 aa21.2■□□□□ 0.99
PPM1F-202ENST00000397495 STK26Q9P289 416 aa21.2■□□□□ 0.99
PPM1F-202ENST00000397495 PLEKHG1Q9ULL1 1385 aa21.2■□□□□ 0.98
PPM1F-202ENST00000397495 ARHGEF28Q8N1W1 1705 aaKnown RBP21.18■□□□□ 0.98
PPM1F-202ENST00000397495 YTHDC2Q9H6S0 1430 aaKnown RBP21.17■□□□□ 0.98
PPM1F-202ENST00000397495 ADAMTS13Q76LX8 1427 aa21.15■□□□□ 0.98
PPM1F-202ENST00000397495 CENPJQ9HC77 1338 aaPredicted RBP21.15■□□□□ 0.98
PPM1F-202ENST00000397495 METP08581 1390 aa21.15■□□□□ 0.98
PPM1F-202ENST00000397495 DISP3Q9P2K9 1392 aa21.15■□□□□ 0.98
PPM1F-202ENST00000397495 QRICH2Q9H0J4 1663 aa21.14■□□□□ 0.98
PPM1F-202ENST00000397495 TMF1P82094 1093 aa21.14■□□□□ 0.97
PPM1F-202ENST00000397495 ANKLE2Q86XL3 938 aa21.14■□□□□ 0.97
PPM1F-202ENST00000397495 SLC26A8Q96RN1 970 aa21.14■□□□□ 0.97
PPM1F-202ENST00000397495 PRKRIP1Q9H875 184 aaPredicted RBP21.1■□□□□ 0.97
PPM1F-202ENST00000397495 LRPPRCP42704 1394 aaKnown RBP21.1■□□□□ 0.97
PPM1F-202ENST00000397495 MED14O60244 1454 aa21.1■□□□□ 0.97
PPM1F-202ENST00000397495 SAFB2Q14151 953 aaKnown RBP eCLIP21.1■□□□□ 0.97
PPM1F-202ENST00000397495 PRAM1Q96QH2 718 aa21.08■□□□□ 0.97
PPM1F-202ENST00000397495 POGKQ9P215 609 aa21.08■□□□□ 0.96
PPM1F-202ENST00000397495 TBX22Q9Y458 520 aa21.07■□□□□ 0.96
PPM1F-202ENST00000397495 ABCC11Q96J66 1382 aa21.07■□□□□ 0.96
PPM1F-202ENST00000397495 SBNO2Q9Y2G9 1366 aa21.07■□□□□ 0.96
PPM1F-202ENST00000397495 DIP2AQ14689 1571 aa21.06■□□□□ 0.96
PPM1F-202ENST00000397495 DLC1Q96QB1 1528 aa21.06■□□□□ 0.96
PPM1F-202ENST00000397495 LMTK3Q96Q04 1460 aa21.06■□□□□ 0.96
PPM1F-202ENST00000397495 SLC24A1O60721 1099 aa21.05■□□□□ 0.96
PPM1F-202ENST00000397495 KNDC1Q76NI1 1749 aa21.05■□□□□ 0.96
PPM1F-202ENST00000397495 NCKAP5LQ9HCH0 1330 aa21.05■□□□□ 0.96
PPM1F-202ENST00000397495 WAPLQ7Z5K2 1190 aa21.04■□□□□ 0.96
PPM1F-202ENST00000397495 CDCA8Q53HL2 280 aa21.03■□□□□ 0.96
PPM1F-202ENST00000397495 NPHP4O75161 1426 aaPredicted RBP21.02■□□□□ 0.96
PPM1F-202ENST00000397495 PTPRUQ92729 1446 aa21.02■□□□□ 0.96
PPM1F-202ENST00000397495 HSPA2P54652 639 aa21.02■□□□□ 0.96
PPM1F-202ENST00000397495 PLEKHH1Q9ULM0 1364 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms