RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 ZFYVE9O95405 1425 aa28.7■■■□□ 2.19
MCF2L-207ENST00000397024 TMEM131LA2VDJ0 1609 aa28.7■■■□□ 2.19
MCF2L-207ENST00000397024 CHGAP10645 457 aaKnown RBP28.69■■■□□ 2.18
MCF2L-207ENST00000397024 KCNA6P17658 529 aa28.68■■■□□ 2.18
MCF2L-207ENST00000397024 XIRP1Q702N8 1843 aaKnown RBP28.68■■■□□ 2.18
MCF2L-207ENST00000397024 RIMS2Q9UQ26 1411 aa28.68■■■□□ 2.18
MCF2L-207ENST00000397024 BCANQ96GW7 911 aa28.67■■■□□ 2.18
MCF2L-207ENST00000397024 NUTM2DQ5VT03 806 aaPredicted RBP28.63■■■□□ 2.17
MCF2L-207ENST00000397024 RBM33Q96EV2 1170 aaKnown RBP28.63■■■□□ 2.17
MCF2L-207ENST00000397024 PLEKHG1Q9ULL1 1385 aa28.62■■■□□ 2.17
MCF2L-207ENST00000397024 PPP1R15AO75807 674 aaPredicted RBP28.61■■■□□ 2.17
MCF2L-207ENST00000397024 HDGFP51858 240 aaKnown RBP28.61■■■□□ 2.17
MCF2L-207ENST00000397024 PROSER2Q86WR7 435 aaPredicted RBP28.61■■■□□ 2.17
MCF2L-207ENST00000397024 TMEM94Q12767 1356 aa28.61■■■□□ 2.17
MCF2L-207ENST00000397024 NAIPQ13075 1403 aa28.6■■■□□ 2.17
MCF2L-207ENST00000397024 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.57■■■□□ 2.16
MCF2L-207ENST00000397024 TBX22Q9Y458 520 aa28.55■■■□□ 2.16
MCF2L-207ENST00000397024 NWD1Q149M9 1564 aa28.54■■■□□ 2.16
MCF2L-207ENST00000397024 ADAMTS13Q76LX8 1427 aa28.52■■■□□ 2.16
MCF2L-207ENST00000397024 CHD2O14647 1828 aaKnown RBP28.51■■■□□ 2.15
MCF2L-207ENST00000397024 SPHKAPQ2M3C7 1700 aa28.5■■■□□ 2.15
MCF2L-207ENST00000397024 NKTRP30414 1462 aaKnown RBP28.5■■■□□ 2.15
MCF2L-207ENST00000397024 HFM1A2PYH4 1435 aa28.47■■■□□ 2.15
MCF2L-207ENST00000397024 TRIM52Q96A61 297 aa28.46■■■□□ 2.15
MCF2L-207ENST00000397024 MED1Q15648 1581 aaPredicted RBP28.45■■■□□ 2.15
MCF2L-207ENST00000397024 FAM135BQ49AJ0 1406 aa28.44■■■□□ 2.14
MCF2L-207ENST00000397024 ZNF326Q5BKZ1 582 aaKnown RBP28.42■■■□□ 2.14
MCF2L-207ENST00000397024 SOCS7O14512 581 aa28.41■■■□□ 2.14
MCF2L-207ENST00000397024 CLTCL1P53675 1640 aa28.4■■■□□ 2.14
MCF2L-207ENST00000397024 MSH6P52701 1360 aa28.39■■■□□ 2.14
MCF2L-207ENST00000397024 DIP2AQ14689 1571 aa28.38■■■□□ 2.13
MCF2L-207ENST00000397024 PTPRUQ92729 1446 aa28.38■■■□□ 2.13
MCF2L-207ENST00000397024 TRPM2O94759 1503 aa28.38■■■□□ 2.13
MCF2L-207ENST00000397024 PIK3R4Q99570 1358 aa28.37■■■□□ 2.13
MCF2L-207ENST00000397024 SLAIN2Q9P270 581 aa28.37■■■□□ 2.13
MCF2L-207ENST00000397024 SLC4A1APQ9BWU0 796 aaKnown RBP28.36■■■□□ 2.13
MCF2L-207ENST00000397024 AMOTL2Q9Y2J4 779 aa28.36■■■□□ 2.13
MCF2L-207ENST00000397024 NRXN3Q9Y4C0 1643 aa28.35■■■□□ 2.13
MCF2L-207ENST00000397024 ROBO1Q9Y6N7 1651 aa28.35■■■□□ 2.13
MCF2L-207ENST00000397024 NCOA3Q9Y6Q9 1424 aa28.32■■■□□ 2.12
MCF2L-207ENST00000397024 SETBP1Q9Y6X0 1596 aa28.31■■■□□ 2.12
MCF2L-207ENST00000397024 NEXMIFQ5QGS0 1516 aa28.3■■■□□ 2.12
MCF2L-207ENST00000397024 FOXD1Q16676 465 aa28.3■■■□□ 2.12
MCF2L-207ENST00000397024 C14orf37Q86TY3 774 aa28.3■■■□□ 2.12
MCF2L-207ENST00000397024 METP08581 1390 aa28.29■■■□□ 2.12
MCF2L-207ENST00000397024 KIF1BO60333 1816 aa28.29■■■□□ 2.12
MCF2L-207ENST00000397024 C19orf44Q9H6X5 657 aa28.28■■■□□ 2.12
MCF2L-207ENST00000397024 PHF23Q9BUL5 403 aaPredicted RBP28.25■■■□□ 2.11
MCF2L-207ENST00000397024 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.25■■■□□ 2.11
MCF2L-207ENST00000397024 ATF3P18847 181 aa28.22■■■□□ 2.11
MCF2L-207ENST00000397024 XRN1Q8IZH2 1706 aaKnown RBP28.22■■■□□ 2.11
MCF2L-207ENST00000397024 CADPS2Q86UW7 1296 aa28.21■■■□□ 2.11
MCF2L-207ENST00000397024 MPHOSPH9Q99550 1183 aa28.2■■■□□ 2.1
MCF2L-207ENST00000397024 RGS17Q9UGC6 210 aaPredicted RBP28.2■■■□□ 2.1
MCF2L-207ENST00000397024 VGFO15240 615 aaPredicted RBP28.19■■■□□ 2.1
MCF2L-207ENST00000397024 RPGRIP1LQ68CZ1 1315 aa28.18■■■□□ 2.1
MCF2L-207ENST00000397024 PHLPP1O60346 1717 aa28.16■■■□□ 2.1
MCF2L-207ENST00000397024 BRINP3Q76B58 766 aa28.11■■■□□ 2.09
MCF2L-207ENST00000397024 COL16A1Q07092 1604 aaPredicted RBP28.1■■■□□ 2.09
MCF2L-207ENST00000397024 SETD1AO15047 1707 aaKnown RBP28.1■■■□□ 2.09
MCF2L-207ENST00000397024 PPLO60437 1756 aa28.1■■■□□ 2.09
MCF2L-207ENST00000397024 RGL3Q3MIN7 710 aa28.1■■■□□ 2.09
MCF2L-207ENST00000397024 SETD5Q9C0A6 1442 aa28.09■■■□□ 2.09
MCF2L-207ENST00000397024 JCADQ9P266 1359 aa28.09■■■□□ 2.09
MCF2L-207ENST00000397024 DCCP43146 1447 aa28.09■■■□□ 2.09
MCF2L-207ENST00000397024 CCDC144AA2RUR9 1427 aa28.08■■■□□ 2.09
MCF2L-207ENST00000397024 ADGRF5Q8IZF2 1346 aa28.07■■■□□ 2.08
MCF2L-207ENST00000397024 SPATA31E1Q6ZUB1 1445 aa28.07■■■□□ 2.08
MCF2L-207ENST00000397024 ROBO2Q9HCK4 1378 aa28.06■■■□□ 2.08
MCF2L-207ENST00000397024 MST1RQ04912 1400 aa28.06■■■□□ 2.08
MCF2L-207ENST00000397024 ADGRL3Q9HAR2 1447 aa28.05■■■□□ 2.08
MCF2L-207ENST00000397024 AHDC1Q5TGY3 1603 aaPredicted RBP28.04■■■□□ 2.08
MCF2L-207ENST00000397024 NALCNQ8IZF0 1738 aa28.02■■■□□ 2.08
MCF2L-207ENST00000397024 POTEAQ6S8J7 498 aa28.02■■■□□ 2.08
MCF2L-207ENST00000397024 PTCH1Q13635 1447 aa28■■■□□ 2.07
MCF2L-207ENST00000397024 RAB3GAP2Q9H2M9 1393 aa27.99■■■□□ 2.07
MCF2L-207ENST00000397024 ASXL1Q8IXJ9 1541 aa27.98■■■□□ 2.07
MCF2L-207ENST00000397024 DDX17Q92841 729 aaKnown RBP27.98■■■□□ 2.07
MCF2L-207ENST00000397024 ACIN1Q9UKV3 1341 aaKnown RBP27.97■■■□□ 2.07
MCF2L-207ENST00000397024 PRAG1Q86YV5 1406 aa27.96■■■□□ 2.07
MCF2L-207ENST00000397024 LRP6O75581 1613 aa27.95■■■□□ 2.06
MCF2L-207ENST00000397024 ANKRD30BQ9BXX2 1392 aa27.95■■■□□ 2.06
MCF2L-207ENST00000397024 IFT172Q9UG01 1749 aa27.95■■■□□ 2.06
MCF2L-207ENST00000397024 SPATA31A6Q5VVP1 1343 aa27.94■■■□□ 2.06
MCF2L-207ENST00000397024 C1orf167Q5SNV9 1468 aa27.92■■■□□ 2.06
MCF2L-207ENST00000397024 TMEM132EQ6IEE7 984 aa27.92■■■□□ 2.06
MCF2L-207ENST00000397024 STK26Q9P289 416 aa27.92■■■□□ 2.06
MCF2L-207ENST00000397024 SHPRHQ149N8 1683 aa27.91■■■□□ 2.06
MCF2L-207ENST00000397024 NHSL1Q5SYE7 1610 aa27.91■■■□□ 2.06
MCF2L-207ENST00000397024 ORAI2Q96SN7 254 aa27.9■■■□□ 2.06
MCF2L-207ENST00000397024 WAPLQ7Z5K2 1190 aa27.89■■■□□ 2.06
MCF2L-207ENST00000397024 PIK3C2GO75747 1445 aa27.87■■■□□ 2.05
MCF2L-207ENST00000397024 NUTM2BA6NNL0 878 aaPredicted RBP27.87■■■□□ 2.05
MCF2L-207ENST00000397024 NUTM2EB1AL46 878 aaPredicted RBP27.87■■■□□ 2.05
MCF2L-207ENST00000397024 NUTM2AQ8IVF1 878 aaPredicted RBP27.87■■■□□ 2.05
MCF2L-207ENST00000397024 LRRC59Q96AG4 307 aaKnown RBP27.86■■■□□ 2.05
MCF2L-207ENST00000397024 LRPPRCP42704 1394 aaKnown RBP27.86■■■□□ 2.05
MCF2L-207ENST00000397024 MEX3CQ5U5Q3 659 aaKnown RBP27.85■■■□□ 2.05
MCF2L-207ENST00000397024 ABCC11Q96J66 1382 aa27.84■■■□□ 2.05
MCF2L-207ENST00000397024 TECPR2O15040 1411 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms