RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 PARP9Q8IXQ6 854 aa9.46□□□□□ -0.9
CMC1-202ENST00000396610 ZFRQ96KR1 1074 aaKnown RBP9.46□□□□□ -0.9
CMC1-202ENST00000396610 PTPN5P54829 565 aa9.45□□□□□ -0.9
CMC1-202ENST00000396610 SWT1Q5T5J6 900 aaKnown RBP9.44□□□□□ -0.9
CMC1-202ENST00000396610 SAMD7Q7Z3H4 446 aa9.44□□□□□ -0.9
CMC1-202ENST00000396610 REPIN1Q9BWE0 567 aaKnown RBP9.44□□□□□ -0.9
CMC1-202ENST00000396610 GPBP1L1Q9HC44 474 aaPredicted RBP9.44□□□□□ -0.9
CMC1-202ENST00000396610 CLCN1P35523 988 aa9.43□□□□□ -0.9
CMC1-202ENST00000396610 BRPF1P55201 1214 aaPredicted RBP9.43□□□□□ -0.9
CMC1-202ENST00000396610 GPCPD1Q9NPB8 672 aa9.43□□□□□ -0.9
CMC1-202ENST00000396610 NEUROD2Q15784 382 aa9.42□□□□□ -0.9
CMC1-202ENST00000396610 GIGYF2Q6Y7W6 1299 aaKnown RBP9.42□□□□□ -0.9
CMC1-202ENST00000396610 THSD4Q6ZMP0 1018 aa9.42□□□□□ -0.9
CMC1-202ENST00000396610 ANKK1Q8NFD2 765 aa9.42□□□□□ -0.9
CMC1-202ENST00000396610 TMUB1Q9BVT8 246 aa9.42□□□□□ -0.9
CMC1-202ENST00000396610 RNF40O75150 1001 aa9.41□□□□□ -0.9
CMC1-202ENST00000396610 WNT2BQ93097 391 aa9.41□□□□□ -0.9
CMC1-202ENST00000396610 BCAMP50895 628 aa9.4□□□□□ -0.9
CMC1-202ENST00000396610 IFFO2Q5TF58 517 aa9.4□□□□□ -0.9
CMC1-202ENST00000396610 LRCH3Q96II8 777 aa9.4□□□□□ -0.9
CMC1-202ENST00000396610 DAXXQ9UER7 740 aaPredicted RBP9.4□□□□□ -0.9
CMC1-202ENST00000396610 KDM4CQ9H3R0 1056 aa9.39□□□□□ -0.91
CMC1-202ENST00000396610 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.39□□□□□ -0.91
CMC1-202ENST00000396610 FAM217BQ9NTX9 383 aaPredicted RBP9.38□□□□□ -0.91
CMC1-202ENST00000396610 SOWAHBA6NEL2 793 aa9.37□□□□□ -0.91
CMC1-202ENST00000396610 DDX11L8A8MPP1 907 aa9.37□□□□□ -0.91
CMC1-202ENST00000396610 RGS20O76081 388 aa9.37□□□□□ -0.91
CMC1-202ENST00000396610 MS4A1P11836 297 aa9.37□□□□□ -0.91
CMC1-202ENST00000396610 SLF2Q8IX21 1173 aa9.37□□□□□ -0.91
CMC1-202ENST00000396610 HDGFP51858 240 aaKnown RBP9.36□□□□□ -0.91
CMC1-202ENST00000396610 SLC10A3P09131 477 aa9.35□□□□□ -0.91
CMC1-202ENST00000396610 SULF1Q8IWU6 871 aa9.35□□□□□ -0.91
CMC1-202ENST00000396610 SSTR3P32745 418 aaPredicted RBP9.34□□□□□ -0.91
CMC1-202ENST00000396610 RDH13Q8NBN7 331 aa9.34□□□□□ -0.91
CMC1-202ENST00000396610 HPS5Q9UPZ3 1129 aa9.34□□□□□ -0.91
CMC1-202ENST00000396610 CD46P15529 392 aa9.33□□□□□ -0.92
CMC1-202ENST00000396610 SLC4A3P48751 1232 aa9.33□□□□□ -0.92
CMC1-202ENST00000396610 CFHP08603 1231 aa9.31□□□□□ -0.92
CMC1-202ENST00000396610 TSR3Q9UJK0 312 aaKnown RBP9.31□□□□□ -0.92
CMC1-202ENST00000396610 FAM117AQ9C073 453 aa9.3□□□□□ -0.92
CMC1-202ENST00000396610 WBP1LQ9NX94 342 aa9.3□□□□□ -0.92
CMC1-202ENST00000396610 A0A0G2JS52 829 aa9.29□□□□□ -0.92
CMC1-202ENST00000396610 PPP4CP60510 307 aa9.29□□□□□ -0.92
CMC1-202ENST00000396610 BEGAINQ9BUH8 593 aa9.29□□□□□ -0.92
CMC1-202ENST00000396610 NYAP1Q6ZVC0 841 aa9.28□□□□□ -0.92
CMC1-202ENST00000396610 RSPH4AQ5TD94 716 aa9.27□□□□□ -0.93
CMC1-202ENST00000396610 PLEKHG3A1L390 1219 aa9.26□□□□□ -0.93
CMC1-202ENST00000396610 GCGRP47871 477 aa9.26□□□□□ -0.93
CMC1-202ENST00000396610 APLP1P51693 650 aa9.26□□□□□ -0.93
CMC1-202ENST00000396610 NECTIN2Q92692 538 aa9.26□□□□□ -0.93
CMC1-202ENST00000396610 DDRGK1Q96HY6 314 aa9.26□□□□□ -0.93
CMC1-202ENST00000396610 KMT5BQ4FZB7 885 aa9.25□□□□□ -0.93
CMC1-202ENST00000396610 ITGBL1O95965 494 aaPredicted RBP9.24□□□□□ -0.93
CMC1-202ENST00000396610 IL27Q8NEV9 243 aa9.24□□□□□ -0.93
CMC1-202ENST00000396610 KDM4AO75164 1064 aa9.23□□□□□ -0.93
CMC1-202ENST00000396610 FUT2Q10981 343 aa9.23□□□□□ -0.93
CMC1-202ENST00000396610 ACTN4O43707 911 aaKnown RBP9.22□□□□□ -0.93
CMC1-202ENST00000396610 NUTM1Q86Y26 1132 aa9.22□□□□□ -0.93
CMC1-202ENST00000396610 SPIRE2Q8WWL2 714 aa9.22□□□□□ -0.93
CMC1-202ENST00000396610 TBC1D2Q9BYX2 928 aa9.22□□□□□ -0.93
CMC1-202ENST00000396610 IRX2Q9BZI1 471 aaPredicted RBP9.22□□□□□ -0.93
CMC1-202ENST00000396610 PRR14Q9BWN1 585 aa9.21□□□□□ -0.94
CMC1-202ENST00000396610 HOXA2O43364 376 aa9.2□□□□□ -0.94
CMC1-202ENST00000396610 HLA-CQ95604 372 aa9.2□□□□□ -0.94
CMC1-202ENST00000396610 PUS10Q3MIT2 529 aaKnown RBP9.19□□□□□ -0.94
CMC1-202ENST00000396610 MYSM1Q5VVJ2 828 aa9.19□□□□□ -0.94
CMC1-202ENST00000396610 PCDHB3Q9Y5E6 796 aa9.19□□□□□ -0.94
CMC1-202ENST00000396610 MOXD2PA6NHM9 499 aa9.18□□□□□ -0.94
CMC1-202ENST00000396610 USP46P62068 366 aa9.18□□□□□ -0.94
CMC1-202ENST00000396610 GUCA2AQ02747 115 aa9.18□□□□□ -0.94
CMC1-202ENST00000396610 SH3D19Q5HYK7 790 aa9.17□□□□□ -0.94
CMC1-202ENST00000396610 BLOC1S3Q6QNY0 202 aa9.17□□□□□ -0.94
CMC1-202ENST00000396610 NDUFV2P19404 249 aa9.16□□□□□ -0.94
CMC1-202ENST00000396610 ATP6V1AP38606 617 aa9.16□□□□□ -0.94
CMC1-202ENST00000396610 COPS2P61201 443 aa9.16□□□□□ -0.94
CMC1-202ENST00000396610 KCNC4Q03721 635 aa9.16□□□□□ -0.94
CMC1-202ENST00000396610 MORN1Q5T089 497 aa9.16□□□□□ -0.94
CMC1-202ENST00000396610 DIXDC1Q155Q3 683 aa9.15□□□□□ -0.94
CMC1-202ENST00000396610 RSBN1LQ6PCB5 846 aaPredicted RBP9.15□□□□□ -0.94
CMC1-202ENST00000396610 CLK2P49760 499 aaKnown RBP9.14□□□□□ -0.95
CMC1-202ENST00000396610 MTRQ99707 1265 aa9.14□□□□□ -0.95
CMC1-202ENST00000396610 RSPH6AQ9H0K4 717 aa9.14□□□□□ -0.95
CMC1-202ENST00000396610 POLR3EQ9NVU0 708 aa9.14□□□□□ -0.95
CMC1-202ENST00000396610 LIMD1Q9UGP4 676 aa9.14□□□□□ -0.95
CMC1-202ENST00000396610 FDX1P10109 184 aa9.13□□□□□ -0.95
CMC1-202ENST00000396610 GRIPAP1Q4V328 841 aa9.13□□□□□ -0.95
CMC1-202ENST00000396610 SLC27A5Q9Y2P5 690 aa9.13□□□□□ -0.95
CMC1-202ENST00000396610 SPTLC1O15269 473 aa9.12□□□□□ -0.95
CMC1-202ENST00000396610 RIC3Q7Z5B4 369 aa9.12□□□□□ -0.95
CMC1-202ENST00000396610 PCDHGC3Q9UN70 934 aa9.12□□□□□ -0.95
CMC1-202ENST00000396610 TLL1O43897 1013 aa9.11□□□□□ -0.95
CMC1-202ENST00000396610 SKIV2LQ15477 1246 aaKnown RBP9.11□□□□□ -0.95
CMC1-202ENST00000396610 CSPP1Q1MSJ5 1256 aa9.11□□□□□ -0.95
CMC1-202ENST00000396610 TMEM132AQ24JP5 1023 aa9.11□□□□□ -0.95
CMC1-202ENST00000396610 TJAP1Q5JTD0 557 aa9.11□□□□□ -0.95
CMC1-202ENST00000396610 NR1I2O75469 434 aa9.1□□□□□ -0.95
CMC1-202ENST00000396610 PROCA1Q8NCQ7 364 aaPredicted RBP9.1□□□□□ -0.95
CMC1-202ENST00000396610 PCDHB15Q9Y5E8 787 aa9.1□□□□□ -0.95
CMC1-202ENST00000396610 RNF19BQ6ZMZ0 732 aa9.09□□□□□ -0.95
CMC1-202ENST00000396610 ZNF516Q92618 1163 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms