RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 COPS2P61201 443 aa9.05□□□□□ -0.96
GABPB1-204ENST00000396464 PTGDRQ13258 359 aa9.05□□□□□ -0.96
GABPB1-204ENST00000396464 TMEM132AQ24JP5 1023 aa9.05□□□□□ -0.96
GABPB1-204ENST00000396464 EYA1Q99502 592 aa9.05□□□□□ -0.96
GABPB1-204ENST00000396464 DNAJB2P25686 324 aa9.05□□□□□ -0.96
GABPB1-204ENST00000396464 ZNF516Q92618 1163 aa9.05□□□□□ -0.96
GABPB1-204ENST00000396464 RANGAP1P46060 587 aaPredicted RBP9.04□□□□□ -0.96
GABPB1-204ENST00000396464 LAPTM4AQ15012 233 aa9.04□□□□□ -0.96
GABPB1-204ENST00000396464 PPP1R18Q6NYC8 613 aa9.04□□□□□ -0.96
GABPB1-204ENST00000396464 PRKD2Q9BZL6 878 aa9.04□□□□□ -0.96
GABPB1-204ENST00000396464 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.03□□□□□ -0.96
GABPB1-204ENST00000396464 FCHSD2O94868 740 aa9.02□□□□□ -0.97
GABPB1-204ENST00000396464 PCDHB3Q9Y5E6 796 aa9.02□□□□□ -0.97
GABPB1-204ENST00000396464 SEMA3EO15041 775 aa9□□□□□ -0.97
GABPB1-204ENST00000396464 GFRA3O60609 400 aa9□□□□□ -0.97
GABPB1-204ENST00000396464 KMT5BQ4FZB7 885 aa9□□□□□ -0.97
GABPB1-204ENST00000396464 ADGRG1Q9Y653 693 aa9□□□□□ -0.97
GABPB1-204ENST00000396464 SMYD5Q6GMV2 418 aa8.99□□□□□ -0.97
GABPB1-204ENST00000396464 NKX2-3Q8TAU0 364 aa8.99□□□□□ -0.97
GABPB1-204ENST00000396464 ZPR1O75312 459 aa8.98□□□□□ -0.97
GABPB1-204ENST00000396464 C14orf37Q86TY3 774 aa8.98□□□□□ -0.97
GABPB1-204ENST00000396464 TMEM134Q9H6X4 195 aa8.98□□□□□ -0.97
GABPB1-204ENST00000396464 V9GY48 417 aaPredicted RBP8.98□□□□□ -0.97
GABPB1-204ENST00000396464 RCCD1A6NED2 376 aa8.97□□□□□ -0.97
GABPB1-204ENST00000396464 FAM161AQ3B820 660 aa8.97□□□□□ -0.97
GABPB1-204ENST00000396464 OATP04181 439 aa8.96□□□□□ -0.98
GABPB1-204ENST00000396464 RSPH4AQ5TD94 716 aa8.96□□□□□ -0.98
GABPB1-204ENST00000396464 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.95□□□□□ -0.98
GABPB1-204ENST00000396464 CFHP08603 1231 aa8.95□□□□□ -0.98
GABPB1-204ENST00000396464 BLOC1S3Q6QNY0 202 aa8.95□□□□□ -0.98
GABPB1-204ENST00000396464 TMUB1Q9BVT8 246 aa8.95□□□□□ -0.98
GABPB1-204ENST00000396464 PODXL2Q9NZ53 605 aa8.95□□□□□ -0.98
GABPB1-204ENST00000396464 HIC1Q14526 733 aa8.93□□□□□ -0.98
GABPB1-204ENST00000396464 ACTN4O43707 911 aaKnown RBP8.92□□□□□ -0.98
GABPB1-204ENST00000396464 NRG2O14511 850 aaPredicted RBP8.91□□□□□ -0.98
GABPB1-204ENST00000396464 NR1I2O75469 434 aa8.9□□□□□ -0.98
GABPB1-204ENST00000396464 RBM26Q5T8P6 1007 aaKnown RBP8.9□□□□□ -0.98
GABPB1-204ENST00000396464 PDZRN3Q9UPQ7 1066 aa8.9□□□□□ -0.98
GABPB1-204ENST00000396464 TESPA1A2RU30 521 aaPredicted RBP8.89□□□□□ -0.99
GABPB1-204ENST00000396464 TRAF7Q6Q0C0 670 aa8.89□□□□□ -0.99
GABPB1-204ENST00000396464 TLL1O43897 1013 aa8.88□□□□□ -0.99
GABPB1-204ENST00000396464 PXYLP1Q8TE99 480 aa8.88□□□□□ -0.99
GABPB1-204ENST00000396464 GNPATO15228 680 aa8.88□□□□□ -0.99
GABPB1-204ENST00000396464 RNF223E7ERA6 249 aa8.87□□□□□ -0.99
GABPB1-204ENST00000396464 SLC19A1P41440 591 aa8.87□□□□□ -0.99
GABPB1-204ENST00000396464 METTL3Q86U44 580 aaKnown RBP8.87□□□□□ -0.99
GABPB1-204ENST00000396464 SLC10A3P09131 477 aa8.86□□□□□ -0.99
GABPB1-204ENST00000396464 RDH13Q8NBN7 331 aa8.86□□□□□ -0.99
GABPB1-204ENST00000396464 S1PR4O95977 384 aa8.85□□□□□ -0.99
GABPB1-204ENST00000396464 ADH1BP00325 375 aa8.84□□□□□ -0.99
GABPB1-204ENST00000396464 ANKLE1Q8NAG6 615 aa8.84□□□□□ -0.99
GABPB1-204ENST00000396464 SLC6A16Q9GZN6 736 aa8.82□□□□□ -1
GABPB1-204ENST00000396464 DDX11L8A8MPP1 907 aa8.81□□□□□ -1
GABPB1-204ENST00000396464 PPEF1O14829 653 aaPredicted RBP8.81□□□□□ -1
GABPB1-204ENST00000396464 PUS10Q3MIT2 529 aaKnown RBP8.81□□□□□ -1
GABPB1-204ENST00000396464 GPIHBP1Q8IV16 184 aa8.81□□□□□ -1
GABPB1-204ENST00000396464 SCUBE3Q8IX30 993 aa8.81□□□□□ -1
GABPB1-204ENST00000396464 FECHP22830 423 aa8.8□□□□□ -1
GABPB1-204ENST00000396464 SULF1Q8IWU6 871 aa8.8□□□□□ -1
GABPB1-204ENST00000396464 SPRYD7Q5W111 196 aa8.8□□□□□ -1
GABPB1-204ENST00000396464 SPSB2Q99619 263 aa8.8□□□□□ -1
GABPB1-204ENST00000396464 ZNF598Q86UK7 904 aaKnown RBP8.79□□□□□ -1
GABPB1-204ENST00000396464 PKDCCQ504Y2 493 aa8.78□□□□□ -1
GABPB1-204ENST00000396464 ZNF697Q5TEC3 545 aa8.77□□□□□ -1.01
GABPB1-204ENST00000396464 NLRP7Q8WX94 980 aa8.77□□□□□ -1.01
GABPB1-204ENST00000396464 ATP6V1AP38606 617 aa8.76□□□□□ -1.01
GABPB1-204ENST00000396464 LCE2BO14633 110 aa8.75□□□□□ -1.01
GABPB1-204ENST00000396464 GPR37O15354 613 aa8.75□□□□□ -1.01
GABPB1-204ENST00000396464 FUT2Q10981 343 aa8.75□□□□□ -1.01
GABPB1-204ENST00000396464 LIAT1Q6ZQX7 453 aa8.75□□□□□ -1.01
GABPB1-204ENST00000396464 SUPT5HO00267 1087 aaKnown RBP8.74□□□□□ -1.01
GABPB1-204ENST00000396464 GRIPAP1Q4V328 841 aa8.74□□□□□ -1.01
GABPB1-204ENST00000396464 ZNF787Q6DD87 383 aa8.74□□□□□ -1.01
GABPB1-204ENST00000396464 FMNL1O95466 1100 aaPredicted RBP8.73□□□□□ -1.01
GABPB1-204ENST00000396464 MORN1Q5T089 497 aa8.73□□□□□ -1.01
GABPB1-204ENST00000396464 TNFRSF10AO00220 468 aa8.72□□□□□ -1.01
GABPB1-204ENST00000396464 GCGRP47871 477 aa8.72□□□□□ -1.01
GABPB1-204ENST00000396464 EMID1Q96A84 441 aaPredicted RBP8.72□□□□□ -1.01
GABPB1-204ENST00000396464 DGAT1O75907 488 aa8.71□□□□□ -1.01
GABPB1-204ENST00000396464 PRR20EP86478 221 aa8.71□□□□□ -1.01
GABPB1-204ENST00000396464 PRR20CP86479 221 aa8.71□□□□□ -1.01
GABPB1-204ENST00000396464 PRR20DP86480 221 aa8.71□□□□□ -1.01
GABPB1-204ENST00000396464 PRR20BP86481 221 aa8.71□□□□□ -1.01
GABPB1-204ENST00000396464 PRR20AP86496 221 aa8.71□□□□□ -1.01
GABPB1-204ENST00000396464 TRIM67Q6ZTA4 783 aa8.71□□□□□ -1.01
GABPB1-204ENST00000396464 FAM187AA6NFU0 413 aa8.71□□□□□ -1.02
GABPB1-204ENST00000396464 SLC27A5Q9Y2P5 690 aa8.71□□□□□ -1.02
GABPB1-204ENST00000396464 CD2BP2O95400 341 aaKnown RBP8.7□□□□□ -1.02
GABPB1-204ENST00000396464 FOXC1Q12948 553 aa8.7□□□□□ -1.02
GABPB1-204ENST00000396464 NPM2Q86SE8 214 aaKnown RBP8.7□□□□□ -1.02
GABPB1-204ENST00000396464 PLA2G2CQ5R387 149 aa8.69□□□□□ -1.02
GABPB1-204ENST00000396464 PHOX2BQ99453 314 aa8.69□□□□□ -1.02
GABPB1-204ENST00000396464 FCF1Q9Y324 198 aaKnown RBP8.69□□□□□ -1.02
GABPB1-204ENST00000396464 ZBTB24O43167 697 aaPredicted RBP8.68□□□□□ -1.02
GABPB1-204ENST00000396464 MAP2K5Q13163 448 aa8.68□□□□□ -1.02
GABPB1-204ENST00000396464 RPIAP49247 311 aa8.67□□□□□ -1.02
GABPB1-204ENST00000396464 Q3C1V9 767 aa8.67□□□□□ -1.02
GABPB1-204ENST00000396464 SALL2Q9Y467 1007 aaPredicted RBP8.67□□□□□ -1.02
GABPB1-204ENST00000396464 GDF9O60383 454 aa8.66□□□□□ -1.02
GABPB1-204ENST00000396464 LMOD2Q6P5Q4 547 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms