RNA–Protein interactions for RNA: ENST00000396356.7

SOX6-202, Transcript of SRY-box 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SOX6, Length 8,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-202ENST00000396356 RUFY1Q96T51 708 aa9.86□□□□□ -0.83
SOX6-202ENST00000396356 RABEP1Q15276 862 aa9.85□□□□□ -0.83
SOX6-202ENST00000396356 ANKRD18AQ8IVF6 992 aa9.85□□□□□ -0.83
SOX6-202ENST00000396356 TSPYL1Q9H0U9 437 aa9.85□□□□□ -0.83
SOX6-202ENST00000396356 KCNH8Q96L42 1107 aa9.85□□□□□ -0.83
SOX6-202ENST00000396356 AKNAQ7Z591 1439 aa9.85□□□□□ -0.83
SOX6-202ENST00000396356 SAFBQ15424 915 aaKnown RBP eCLIP9.85□□□□□ -0.83
SOX6-202ENST00000396356 POLA1P09884 1462 aaPredicted RBP9.85□□□□□ -0.83
SOX6-202ENST00000396356 EHBP1L1Q8N3D4 1523 aa9.85□□□□□ -0.83
SOX6-202ENST00000396356 BRD4O60885 1362 aaPredicted RBP9.85□□□□□ -0.83
SOX6-202ENST00000396356 PSMA5P28066 241 aa9.85□□□□□ -0.83
SOX6-202ENST00000396356 TAF7LQ5H9L4 462 aa9.85□□□□□ -0.83
SOX6-202ENST00000396356 JMYQ8N9B5 988 aa9.85□□□□□ -0.83
SOX6-202ENST00000396356 CADPSQ9ULU8 1353 aa9.84□□□□□ -0.83
SOX6-202ENST00000396356 PKD2Q13563 968 aa9.84□□□□□ -0.83
SOX6-202ENST00000396356 ANKRD30BQ9BXX2 1392 aa9.84□□□□□ -0.83
SOX6-202ENST00000396356 PDCL2Q8N4E4 241 aa9.84□□□□□ -0.83
SOX6-202ENST00000396356 GSE1Q14687 1217 aa9.84□□□□□ -0.83
SOX6-202ENST00000396356 MPHOSPH9Q99550 1183 aa9.84□□□□□ -0.83
SOX6-202ENST00000396356 A0A0G2JS52 829 aa9.84□□□□□ -0.83
SOX6-202ENST00000396356 CCDC39Q9UFE4 941 aa9.84□□□□□ -0.83
SOX6-202ENST00000396356 INCENPQ9NQS7 918 aa9.84□□□□□ -0.84
SOX6-202ENST00000396356 TCEAL9Q9UHQ7 104 aa9.84□□□□□ -0.84
SOX6-202ENST00000396356 TRDNQ13061 729 aa9.83□□□□□ -0.84
SOX6-202ENST00000396356 DNAI2Q9GZS0 605 aa9.83□□□□□ -0.84
SOX6-202ENST00000396356 FAM184AQ8NB25 1140 aa9.83□□□□□ -0.84
SOX6-202ENST00000396356 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.83□□□□□ -0.84
SOX6-202ENST00000396356 INTS3Q68E01 1043 aaKnown RBP9.82□□□□□ -0.84
SOX6-202ENST00000396356 CHMP5Q9NZZ3 219 aa9.82□□□□□ -0.84
SOX6-202ENST00000396356 FEZ1Q99689 392 aa9.82□□□□□ -0.84
SOX6-202ENST00000396356 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.82□□□□□ -0.84
SOX6-202ENST00000396356 CC2D1BQ5T0F9 858 aaKnown RBP9.81□□□□□ -0.84
SOX6-202ENST00000396356 DHX29Q7Z478 1369 aaKnown RBP9.81□□□□□ -0.84
SOX6-202ENST00000396356 HSPA5P11021 654 aaKnown RBP9.81□□□□□ -0.84
SOX6-202ENST00000396356 ERLIN2O94905 339 aa9.81□□□□□ -0.84
SOX6-202ENST00000396356 CCDC73Q6ZRK6 1079 aa9.81□□□□□ -0.84
SOX6-202ENST00000396356 CAVIN2O95810 425 aa9.81□□□□□ -0.84
SOX6-202ENST00000396356 CUL7Q14999 1698 aa9.81□□□□□ -0.84
SOX6-202ENST00000396356 TRIM6-TRIM34B2RNG4 842 aa9.8□□□□□ -0.84
SOX6-202ENST00000396356 NEUROD2Q15784 382 aa9.8□□□□□ -0.84
SOX6-202ENST00000396356 MRE11P49959 708 aa9.8□□□□□ -0.84
SOX6-202ENST00000396356 USP47Q96K76 1375 aa9.8□□□□□ -0.84
SOX6-202ENST00000396356 ERC1Q8IUD2 1116 aa9.8□□□□□ -0.84
SOX6-202ENST00000396356 CCDC141Q6ZP82 1450 aa9.8□□□□□ -0.84
SOX6-202ENST00000396356 POLR3GO15318 223 aaPredicted RBP9.8□□□□□ -0.84
SOX6-202ENST00000396356 SART3Q15020 963 aaKnown RBP9.8□□□□□ -0.84
SOX6-202ENST00000396356 ANKRD1Q15327 319 aa9.8□□□□□ -0.84
SOX6-202ENST00000396356 DACH1Q9UI36 760 aa9.8□□□□□ -0.84
SOX6-202ENST00000396356 MCM3P25205 808 aa9.8□□□□□ -0.84
SOX6-202ENST00000396356 SMARCE1Q969G3 411 aa9.8□□□□□ -0.84
SOX6-202ENST00000396356 FAM107BQ9H098 131 aa9.79□□□□□ -0.84
SOX6-202ENST00000396356 PLEKHH1Q9ULM0 1364 aa9.79□□□□□ -0.84
SOX6-202ENST00000396356 CPLX1O14810 134 aa9.79□□□□□ -0.84
SOX6-202ENST00000396356 GNAI1P63096 354 aa9.79□□□□□ -0.84
SOX6-202ENST00000396356 SMG6Q86US8 1419 aaKnown RBP9.79□□□□□ -0.84
SOX6-202ENST00000396356 ERICH2A1L162 156 aa9.79□□□□□ -0.84
SOX6-202ENST00000396356 MARCH6O60337 910 aa9.79□□□□□ -0.84
SOX6-202ENST00000396356 CIZ1Q9ULV3 898 aaPredicted RBP9.79□□□□□ -0.84
SOX6-202ENST00000396356 CWC22Q9HCG8 908 aaKnown RBP9.78□□□□□ -0.84
SOX6-202ENST00000396356 SLC3A2P08195 630 aaKnown RBP9.78□□□□□ -0.84
SOX6-202ENST00000396356 WIZO95785 1651 aa9.78□□□□□ -0.84
SOX6-202ENST00000396356 PRDM2Q13029 1718 aa9.78□□□□□ -0.84
SOX6-202ENST00000396356 DESP17661 470 aa9.78□□□□□ -0.84
SOX6-202ENST00000396356 TRIM21P19474 475 aaKnown RBP9.78□□□□□ -0.84
SOX6-202ENST00000396356 MROH2BQ7Z745 1585 aa9.78□□□□□ -0.84
SOX6-202ENST00000396356 DDX49Q9Y6V7 483 aaKnown RBP9.78□□□□□ -0.84
SOX6-202ENST00000396356 CASKIN1Q8WXD9 1431 aa9.78□□□□□ -0.84
SOX6-202ENST00000396356 ERLIN1O75477 346 aa9.78□□□□□ -0.84
SOX6-202ENST00000396356 TXLNAP40222 546 aa9.78□□□□□ -0.84
SOX6-202ENST00000396356 OLFM4Q6UX06 510 aa9.77□□□□□ -0.84
SOX6-202ENST00000396356 COG3Q96JB2 828 aa9.77□□□□□ -0.84
SOX6-202ENST00000396356 ZBTB7CA1YPR0 619 aa9.77□□□□□ -0.85
SOX6-202ENST00000396356 B4GALNT3Q6L9W6 998 aa9.77□□□□□ -0.85
SOX6-202ENST00000396356 IRX6P78412 446 aaPredicted RBP9.77□□□□□ -0.85
SOX6-202ENST00000396356 EIF3JO75822 258 aaKnown RBP9.77□□□□□ -0.85
SOX6-202ENST00000396356 C1orf141Q5JVX7 400 aa9.77□□□□□ -0.85
SOX6-202ENST00000396356 TUBB4BP68371 445 aa9.76□□□□□ -0.85
SOX6-202ENST00000396356 MAP3K1Q13233 1512 aa9.76□□□□□ -0.85
SOX6-202ENST00000396356 HMGXB3Q12766 1538 aa9.76□□□□□ -0.85
SOX6-202ENST00000396356 SRCIN1Q9C0H9 1055 aa9.76□□□□□ -0.85
SOX6-202ENST00000396356 TRIM34Q9BYJ4 488 aa9.76□□□□□ -0.85
SOX6-202ENST00000396356 FAM13BQ9NYF5 915 aa9.76□□□□□ -0.85
SOX6-202ENST00000396356 EZRP15311 586 aaKnown RBP9.75□□□□□ -0.85
SOX6-202ENST00000396356 SASS6Q6UVJ0 657 aa9.75□□□□□ -0.85
SOX6-202ENST00000396356 FAM43AQ8N2R8 423 aa9.75□□□□□ -0.85
SOX6-202ENST00000396356 GOLGA6L10A6NI86 522 aa9.75□□□□□ -0.85
SOX6-202ENST00000396356 DHX37Q8IY37 1157 aaKnown RBP9.75□□□□□ -0.85
SOX6-202ENST00000396356 TTC5Q8N0Z6 440 aa9.75□□□□□ -0.85
SOX6-202ENST00000396356 ZNF396Q96N95 335 aaPredicted RBP9.75□□□□□ -0.85
SOX6-202ENST00000396356 G3V3G9 751 aa9.75□□□□□ -0.85
SOX6-202ENST00000396356 DCAF8Q5TAQ9 597 aa9.75□□□□□ -0.85
SOX6-202ENST00000396356 MNS1Q8NEH6 495 aa9.75□□□□□ -0.85
SOX6-202ENST00000396356 CCDC43Q96MW1 224 aaKnown RBP9.75□□□□□ -0.85
SOX6-202ENST00000396356 RRP1P56182 461 aaKnown RBP9.75□□□□□ -0.85
SOX6-202ENST00000396356 FOXD1Q16676 465 aa9.75□□□□□ -0.85
SOX6-202ENST00000396356 DDX12PQ92771 950 aa9.74□□□□□ -0.85
SOX6-202ENST00000396356 AEBP1Q8IUX7 1158 aa9.74□□□□□ -0.85
SOX6-202ENST00000396356 FGD6Q6ZV73 1430 aa9.74□□□□□ -0.85
SOX6-202ENST00000396356 STIM1Q13586 685 aa9.74□□□□□ -0.85
SOX6-202ENST00000396356 CDKL5O76039 1030 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms