RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 TMEM94Q12767 1356 aa24.84■■□□□ 1.57
DDR1-229ENST00000396342 C14orf37Q86TY3 774 aa24.82■■□□□ 1.56
DDR1-229ENST00000396342 RIMS2Q9UQ26 1411 aa24.81■■□□□ 1.56
DDR1-229ENST00000396342 MSH6P52701 1360 aa24.8■■□□□ 1.56
DDR1-229ENST00000396342 PLEKHG1Q9ULL1 1385 aa24.8■■□□□ 1.56
DDR1-229ENST00000396342 TET3O43151 1660 aa24.79■■□□□ 1.56
DDR1-229ENST00000396342 TBX22Q9Y458 520 aa24.76■■□□□ 1.55
DDR1-229ENST00000396342 NKTRP30414 1462 aaKnown RBP24.75■■□□□ 1.55
DDR1-229ENST00000396342 MED1Q15648 1581 aaPredicted RBP24.75■■□□□ 1.55
DDR1-229ENST00000396342 FAM135BQ49AJ0 1406 aa24.74■■□□□ 1.55
DDR1-229ENST00000396342 UNC13BO14795 1591 aa24.74■■□□□ 1.55
DDR1-229ENST00000396342 STRCP1A6NGW2 1772 aa24.73■■□□□ 1.55
DDR1-229ENST00000396342 ZNF326Q5BKZ1 582 aaKnown RBP24.73■■□□□ 1.55
DDR1-229ENST00000396342 RBM33Q96EV2 1170 aaKnown RBP24.72■■□□□ 1.55
DDR1-229ENST00000396342 NUTM2DQ5VT03 806 aaPredicted RBP24.71■■□□□ 1.55
DDR1-229ENST00000396342 ZFYVE9O95405 1425 aa24.7■■□□□ 1.55
DDR1-229ENST00000396342 GCC2Q8IWJ2 1684 aa24.7■■□□□ 1.54
DDR1-229ENST00000396342 SLAIN2Q9P270 581 aa24.69■■□□□ 1.54
DDR1-229ENST00000396342 ALKQ9UM73 1620 aa24.68■■□□□ 1.54
DDR1-229ENST00000396342 ATF3P18847 181 aa24.67■■□□□ 1.54
DDR1-229ENST00000396342 TRIM52Q96A61 297 aa24.66■■□□□ 1.54
DDR1-229ENST00000396342 PIK3R4Q99570 1358 aa24.66■■□□□ 1.54
DDR1-229ENST00000396342 IQGAP3Q86VI3 1631 aa24.65■■□□□ 1.54
DDR1-229ENST00000396342 NCOA3Q9Y6Q9 1424 aa24.64■■□□□ 1.54
DDR1-229ENST00000396342 CADPS2Q86UW7 1296 aa24.64■■□□□ 1.54
DDR1-229ENST00000396342 TMEM131LA2VDJ0 1609 aa24.64■■□□□ 1.53
DDR1-229ENST00000396342 C19orf44Q9H6X5 657 aa24.62■■□□□ 1.53
DDR1-229ENST00000396342 NWD1Q149M9 1564 aa24.61■■□□□ 1.53
DDR1-229ENST00000396342 AMOTL2Q9Y2J4 779 aa24.6■■□□□ 1.53
DDR1-229ENST00000396342 E9PCH4 1651 aa24.59■■□□□ 1.53
DDR1-229ENST00000396342 DIP2AQ14689 1571 aa24.59■■□□□ 1.53
DDR1-229ENST00000396342 RRBP1Q9P2E9 1410 aaKnown RBP24.57■■□□□ 1.52
DDR1-229ENST00000396342 TRPM2O94759 1503 aa24.55■■□□□ 1.52
DDR1-229ENST00000396342 ADAMTS13Q76LX8 1427 aa24.53■■□□□ 1.52
DDR1-229ENST00000396342 SLC4A1APQ9BWU0 796 aaKnown RBP24.53■■□□□ 1.52
DDR1-229ENST00000396342 JCADQ9P266 1359 aa24.53■■□□□ 1.52
DDR1-229ENST00000396342 ROBO1Q9Y6N7 1651 aa24.51■■□□□ 1.51
DDR1-229ENST00000396342 VGFO15240 615 aaPredicted RBP24.51■■□□□ 1.51
DDR1-229ENST00000396342 MEX3CQ5U5Q3 659 aaKnown RBP24.51■■□□□ 1.51
DDR1-229ENST00000396342 XIRP1Q702N8 1843 aaKnown RBP24.51■■□□□ 1.51
DDR1-229ENST00000396342 NAIPQ13075 1403 aa24.49■■□□□ 1.51
DDR1-229ENST00000396342 CHD2O14647 1828 aaKnown RBP24.47■■□□□ 1.51
DDR1-229ENST00000396342 MYO5BQ9ULV0 1848 aa24.47■■□□□ 1.51
DDR1-229ENST00000396342 HFM1A2PYH4 1435 aa24.44■■□□□ 1.5
DDR1-229ENST00000396342 SPATA31A6Q5VVP1 1343 aa24.44■■□□□ 1.5
DDR1-229ENST00000396342 RPGRIP1LQ68CZ1 1315 aa24.44■■□□□ 1.5
DDR1-229ENST00000396342 ACIN1Q9UKV3 1341 aaKnown RBP24.43■■□□□ 1.5
DDR1-229ENST00000396342 SPHKAPQ2M3C7 1700 aa24.42■■□□□ 1.5
DDR1-229ENST00000396342 DCCP43146 1447 aa24.42■■□□□ 1.5
DDR1-229ENST00000396342 SETBP1Q9Y6X0 1596 aa24.39■■□□□ 1.5
DDR1-229ENST00000396342 RGS17Q9UGC6 210 aaPredicted RBP24.39■■□□□ 1.49
DDR1-229ENST00000396342 PHLPP1O60346 1717 aa24.38■■□□□ 1.49
DDR1-229ENST00000396342 PTPRUQ92729 1446 aa24.38■■□□□ 1.49
DDR1-229ENST00000396342 ZNF772Q68DY9 489 aaPredicted RBP24.37■■□□□ 1.49
DDR1-229ENST00000396342 BRINP3Q76B58 766 aa24.37■■□□□ 1.49
DDR1-229ENST00000396342 METP08581 1390 aa24.37■■□□□ 1.49
DDR1-229ENST00000396342 POTEAQ6S8J7 498 aa24.34■■□□□ 1.49
DDR1-229ENST00000396342 LRRC59Q96AG4 307 aaKnown RBP24.34■■□□□ 1.49
DDR1-229ENST00000396342 NUTM2BA6NNL0 878 aaPredicted RBP24.33■■□□□ 1.49
DDR1-229ENST00000396342 NUTM2EB1AL46 878 aaPredicted RBP24.33■■□□□ 1.49
DDR1-229ENST00000396342 NUTM2AQ8IVF1 878 aaPredicted RBP24.33■■□□□ 1.49
DDR1-229ENST00000396342 CLTCL1P53675 1640 aa24.32■■□□□ 1.48
DDR1-229ENST00000396342 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.32■■□□□ 1.48
DDR1-229ENST00000396342 CCDC144AA2RUR9 1427 aa24.31■■□□□ 1.48
DDR1-229ENST00000396342 ADGRL3Q9HAR2 1447 aa24.3■■□□□ 1.48
DDR1-229ENST00000396342 NEXMIFQ5QGS0 1516 aa24.3■■□□□ 1.48
DDR1-229ENST00000396342 AHDC1Q5TGY3 1603 aaPredicted RBP24.28■■□□□ 1.48
DDR1-229ENST00000396342 KIF1BO60333 1816 aa24.27■■□□□ 1.48
DDR1-229ENST00000396342 RGL3Q3MIN7 710 aa24.27■■□□□ 1.48
DDR1-229ENST00000396342 MPHOSPH9Q99550 1183 aa24.27■■□□□ 1.48
DDR1-229ENST00000396342 FOXD1Q16676 465 aa24.25■■□□□ 1.47
DDR1-229ENST00000396342 MST1RQ04912 1400 aa24.25■■□□□ 1.47
DDR1-229ENST00000396342 COL16A1Q07092 1604 aaPredicted RBP24.24■■□□□ 1.47
DDR1-229ENST00000396342 XRN1Q8IZH2 1706 aaKnown RBP24.24■■□□□ 1.47
DDR1-229ENST00000396342 ASXL1Q8IXJ9 1541 aa24.24■■□□□ 1.47
DDR1-229ENST00000396342 NRXN3Q9Y4C0 1643 aa24.24■■□□□ 1.47
DDR1-229ENST00000396342 ANKRD30BQ9BXX2 1392 aa24.23■■□□□ 1.47
DDR1-229ENST00000396342 PTCH1Q13635 1447 aa24.23■■□□□ 1.47
DDR1-229ENST00000396342 RXRBP28702 533 aa24.21■■□□□ 1.47
DDR1-229ENST00000396342 SETD5Q9C0A6 1442 aa24.2■■□□□ 1.46
DDR1-229ENST00000396342 ROBO2Q9HCK4 1378 aa24.18■■□□□ 1.46
DDR1-229ENST00000396342 STK26Q9P289 416 aa24.18■■□□□ 1.46
DDR1-229ENST00000396342 C1orf167Q5SNV9 1468 aa24.16■■□□□ 1.46
DDR1-229ENST00000396342 C8orf37Q96NL8 207 aa24.16■■□□□ 1.46
DDR1-229ENST00000396342 ESCO1Q5FWF5 840 aa24.15■■□□□ 1.46
DDR1-229ENST00000396342 AFF2P51816 1311 aa24.14■■□□□ 1.46
DDR1-229ENST00000396342 LRP6O75581 1613 aa24.14■■□□□ 1.46
DDR1-229ENST00000396342 DDX17Q92841 729 aaKnown RBP24.14■■□□□ 1.45
DDR1-229ENST00000396342 NGLY1Q96IV0 654 aa24.14■■□□□ 1.45
DDR1-229ENST00000396342 SHPRHQ149N8 1683 aa24.14■■□□□ 1.45
DDR1-229ENST00000396342 ADGRF5Q8IZF2 1346 aa24.13■■□□□ 1.45
DDR1-229ENST00000396342 ORAI2Q96SN7 254 aa24.13■■□□□ 1.45
DDR1-229ENST00000396342 LRPPRCP42704 1394 aaKnown RBP24.12■■□□□ 1.45
DDR1-229ENST00000396342 NPHP3Q7Z494 1330 aa24.11■■□□□ 1.45
DDR1-229ENST00000396342 ADAMTS2O95450 1211 aa24.1■■□□□ 1.45
DDR1-229ENST00000396342 PNPLA6Q8IY17 1366 aa24.1■■□□□ 1.45
DDR1-229ENST00000396342 PRAG1Q86YV5 1406 aa24.1■■□□□ 1.45
DDR1-229ENST00000396342 QTRT2Q9H974 415 aaKnown RBP24.08■■□□□ 1.45
DDR1-229ENST00000396342 SOS2Q07890 1332 aaPredicted RBP24.07■■□□□ 1.44
DDR1-229ENST00000396342 RBM6P78332 1123 aaKnown RBP24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms