RNA–Protein interactions for RNA: ENST00000396133.7

CCNE2-202, Transcript of cyclin E2, humanhuman

TSL 1 (best) BASIC

Gene CCNE2, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE2-202ENST00000396133 RCCD1A6NED2 376 aa13.05□□□□□ -0.32
CCNE2-202ENST00000396133 HOXB1P14653 301 aaPredicted RBP13.04□□□□□ -0.32
CCNE2-202ENST00000396133 EYA1Q99502 592 aa13.03□□□□□ -0.32
CCNE2-202ENST00000396133 TSKSQ9UJT2 592 aa13.03□□□□□ -0.32
CCNE2-202ENST00000396133 NBPF26B4DH59 902 aa13.02□□□□□ -0.33
CCNE2-202ENST00000396133 TRAK2O60296 914 aa13.02□□□□□ -0.33
CCNE2-202ENST00000396133 PTPREP23469 700 aa13.01□□□□□ -0.33
CCNE2-202ENST00000396133 CD46P15529 392 aa13□□□□□ -0.33
CCNE2-202ENST00000396133 PROSER2Q86WR7 435 aaPredicted RBP13□□□□□ -0.33
CCNE2-202ENST00000396133 SULF1Q8IWU6 871 aa13□□□□□ -0.33
CCNE2-202ENST00000396133 SPDYE5A6NIY4 337 aa12.99□□□□□ -0.33
CCNE2-202ENST00000396133 DNAJB2P25686 324 aa12.99□□□□□ -0.33
CCNE2-202ENST00000396133 LIMD1Q9UGP4 676 aa12.99□□□□□ -0.33
CCNE2-202ENST00000396133 RFC5P40937 340 aa12.98□□□□□ -0.33
CCNE2-202ENST00000396133 NUDT18Q6ZVK8 323 aa12.98□□□□□ -0.33
CCNE2-202ENST00000396133 SPIRE2Q8WWL2 714 aa12.98□□□□□ -0.33
CCNE2-202ENST00000396133 TRIM6-TRIM34B2RNG4 842 aa12.97□□□□□ -0.33
CCNE2-202ENST00000396133 C3orf80F5H4A9 247 aa12.96□□□□□ -0.33
CCNE2-202ENST00000396133 RAD21O60216 631 aa12.96□□□□□ -0.33
CCNE2-202ENST00000396133 POM121Q96HA1 1249 aa12.96□□□□□ -0.33
CCNE2-202ENST00000396133 BANK1Q8NDB2 785 aa12.95□□□□□ -0.34
CCNE2-202ENST00000396133 TMEM134Q9H6X4 195 aa12.95□□□□□ -0.34
CCNE2-202ENST00000396133 PNMA3Q9UL41 463 aa12.95□□□□□ -0.34
CCNE2-202ENST00000396133 DDX11L8A8MPP1 907 aa12.94□□□□□ -0.34
CCNE2-202ENST00000396133 RIC3Q7Z5B4 369 aa12.94□□□□□ -0.34
CCNE2-202ENST00000396133 CCDC82Q8N4S0 544 aa12.94□□□□□ -0.34
CCNE2-202ENST00000396133 TUSC1Q2TAM9 212 aa12.94□□□□□ -0.34
CCNE2-202ENST00000396133 PPP2R2DQ66LE6 453 aa12.94□□□□□ -0.34
CCNE2-202ENST00000396133 TATDN2Q93075 761 aa12.94□□□□□ -0.34
CCNE2-202ENST00000396133 FBXO31Q5XUX0 539 aaPredicted RBP12.93□□□□□ -0.34
CCNE2-202ENST00000396133 RSBN1LQ6PCB5 846 aaPredicted RBP12.93□□□□□ -0.34
CCNE2-202ENST00000396133 PACS2Q86VP3 889 aa12.93□□□□□ -0.34
CCNE2-202ENST00000396133 NUTM1Q86Y26 1132 aa12.93□□□□□ -0.34
CCNE2-202ENST00000396133 ERBB3P21860 1342 aa12.92□□□□□ -0.34
CCNE2-202ENST00000396133 SPTLC1O15269 473 aa12.92□□□□□ -0.34
CCNE2-202ENST00000396133 TMEM259Q4ZIN3 620 aa12.91□□□□□ -0.34
CCNE2-202ENST00000396133 FNBP4Q8N3X1 1017 aaPredicted RBP12.91□□□□□ -0.34
CCNE2-202ENST00000396133 COG6Q9Y2V7 657 aa12.91□□□□□ -0.34
CCNE2-202ENST00000396133 KCNK17Q96T54 332 aa12.9□□□□□ -0.34
CCNE2-202ENST00000396133 SNRKQ9NRH2 765 aa12.9□□□□□ -0.34
CCNE2-202ENST00000396133 PROX2Q3B8N5 592 aa12.89□□□□□ -0.35
CCNE2-202ENST00000396133 MOXD2PA6NHM9 499 aa12.88□□□□□ -0.35
CCNE2-202ENST00000396133 GJA5P36382 358 aa12.87□□□□□ -0.35
CCNE2-202ENST00000396133 RDH13Q8NBN7 331 aa12.87□□□□□ -0.35
CCNE2-202ENST00000396133 KCNH8Q96L42 1107 aa12.87□□□□□ -0.35
CCNE2-202ENST00000396133 SMAPO00193 183 aa12.86□□□□□ -0.35
CCNE2-202ENST00000396133 CSPP1Q1MSJ5 1256 aa12.86□□□□□ -0.35
CCNE2-202ENST00000396133 VARS2Q5ST30 1063 aaKnown RBP12.85□□□□□ -0.35
CCNE2-202ENST00000396133 MTMR14Q8NCE2 650 aa12.85□□□□□ -0.35
CCNE2-202ENST00000396133 ZNF777Q9ULD5 760 aaPredicted RBP12.84□□□□□ -0.35
CCNE2-202ENST00000396133 SOCS7O14512 581 aa12.83□□□□□ -0.36
CCNE2-202ENST00000396133 QPCTQ16769 361 aa12.83□□□□□ -0.36
CCNE2-202ENST00000396133 NDUFV2P19404 249 aa12.82□□□□□ -0.36
CCNE2-202ENST00000396133 LILRB3O75022 631 aa12.81□□□□□ -0.36
CCNE2-202ENST00000396133 KDM4AO75164 1064 aa12.81□□□□□ -0.36
CCNE2-202ENST00000396133 CCDC97Q96F63 343 aaPredicted RBP12.81□□□□□ -0.36
CCNE2-202ENST00000396133 ZBED2Q9BTP6 218 aa12.81□□□□□ -0.36
CCNE2-202ENST00000396133 USP46P62068 366 aa12.8□□□□□ -0.36
CCNE2-202ENST00000396133 HOXA2O43364 376 aa12.79□□□□□ -0.36
CCNE2-202ENST00000396133 PRPF38BQ5VTL8 546 aaKnown RBP12.79□□□□□ -0.36
CCNE2-202ENST00000396133 KIAA1468Q9P260 1216 aa12.79□□□□□ -0.36
CCNE2-202ENST00000396133 PCDHB15Q9Y5E8 787 aa12.79□□□□□ -0.36
CCNE2-202ENST00000396133 ZNF687Q8N1G0 1237 aa12.78□□□□□ -0.36
CCNE2-202ENST00000396133 GDPD2Q9HCC8 539 aa12.78□□□□□ -0.36
CCNE2-202ENST00000396133 AP1G2O75843 785 aa12.77□□□□□ -0.37
CCNE2-202ENST00000396133 USP17L8P0C7I0 530 aa12.77□□□□□ -0.37
CCNE2-202ENST00000396133 GCGRP47871 477 aa12.77□□□□□ -0.37
CCNE2-202ENST00000396133 RSPH4AQ5TD94 716 aa12.77□□□□□ -0.37
CCNE2-202ENST00000396133 CABLES1Q8TDN4 633 aa12.77□□□□□ -0.37
CCNE2-202ENST00000396133 PODXL2Q9NZ53 605 aa12.77□□□□□ -0.37
CCNE2-202ENST00000396133 SERPINA10Q9UK55 444 aa12.77□□□□□ -0.37
CCNE2-202ENST00000396133 NUTM2BA6NNL0 878 aaPredicted RBP12.76□□□□□ -0.37
CCNE2-202ENST00000396133 NUTM2EB1AL46 878 aaPredicted RBP12.76□□□□□ -0.37
CCNE2-202ENST00000396133 RTL5Q5HYW3 569 aaPredicted RBP12.76□□□□□ -0.37
CCNE2-202ENST00000396133 NUTM2DQ5VT03 806 aaPredicted RBP12.76□□□□□ -0.37
CCNE2-202ENST00000396133 NUTM2AQ8IVF1 878 aaPredicted RBP12.76□□□□□ -0.37
CCNE2-202ENST00000396133 ZBTB3Q9H5J0 574 aa12.76□□□□□ -0.37
CCNE2-202ENST00000396133 ZNF330Q9Y3S2 320 aaPredicted RBP12.76□□□□□ -0.37
CCNE2-202ENST00000396133 SWT1Q5T5J6 900 aaKnown RBP12.75□□□□□ -0.37
CCNE2-202ENST00000396133 PSEN2P49810 448 aa12.74□□□□□ -0.37
CCNE2-202ENST00000396133 WWC1Q8IX03 1113 aa12.74□□□□□ -0.37
CCNE2-202ENST00000396133 RABGEF1Q9UJ41 708 aa12.74□□□□□ -0.37
CCNE2-202ENST00000396133 FDX1P10109 184 aa12.73□□□□□ -0.37
CCNE2-202ENST00000396133 PRM3Q9NNZ6 103 aa12.73□□□□□ -0.37
CCNE2-202ENST00000396133 SLC10A3P09131 477 aa12.72□□□□□ -0.37
CCNE2-202ENST00000396133 HRCP23327 699 aa12.72□□□□□ -0.37
CCNE2-202ENST00000396133 ABL2P42684 1182 aa12.72□□□□□ -0.37
CCNE2-202ENST00000396133 SEPT9Q9UHD8 586 aaPredicted RBP12.72□□□□□ -0.37
CCNE2-202ENST00000396133 TBC1D2BQ9UPU7 963 aa12.72□□□□□ -0.37
CCNE2-202ENST00000396133 TRIM26Q12899 539 aaPredicted RBP12.7□□□□□ -0.38
CCNE2-202ENST00000396133 SLC4A5Q9BY07 1137 aa12.7□□□□□ -0.38
CCNE2-202ENST00000396133 ARHGAP33O14559 1287 aa12.69□□□□□ -0.38
CCNE2-202ENST00000396133 SLC4A3P48751 1232 aa12.69□□□□□ -0.38
CCNE2-202ENST00000396133 GUCA2AQ02747 115 aa12.69□□□□□ -0.38
CCNE2-202ENST00000396133 HLA-CQ95604 372 aa12.69□□□□□ -0.38
CCNE2-202ENST00000396133 PCDHGC3Q9UN70 934 aa12.69□□□□□ -0.38
CCNE2-202ENST00000396133 PDIA4P13667 645 aaKnown RBP12.68□□□□□ -0.38
CCNE2-202ENST00000396133 FAM98CQ17RN3 349 aaKnown RBP12.68□□□□□ -0.38
CCNE2-202ENST00000396133 RNF166Q96A37 237 aaPredicted RBP12.67□□□□□ -0.38
CCNE2-202ENST00000396133 NDUFB9Q9Y6M9 179 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms