RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 RYDENQ9NUL5 291 aaKnown RBP6.21□□□□□ -1.42
XRCC4-203ENST00000396027 NCKAP5LQ9HCH0 1330 aa6.21□□□□□ -1.42
XRCC4-203ENST00000396027 SMAPO00193 183 aa6.2□□□□□ -1.42
XRCC4-203ENST00000396027 SNRPBP14678 240 aaKnown RBP6.2□□□□□ -1.42
XRCC4-203ENST00000396027 FOXC1Q12948 553 aa6.2□□□□□ -1.42
XRCC4-203ENST00000396027 SLF2Q8IX21 1173 aa6.2□□□□□ -1.42
XRCC4-203ENST00000396027 TOR4AQ9NXH8 423 aa6.2□□□□□ -1.42
XRCC4-203ENST00000396027 XP32Q5T750 250 aa6.2□□□□□ -1.42
XRCC4-203ENST00000396027 NPAS3Q8IXF0 933 aa6.2□□□□□ -1.42
XRCC4-203ENST00000396027 CYP4X1Q8N118 509 aa6.2□□□□□ -1.42
XRCC4-203ENST00000396027 TATDN2Q93075 761 aa6.2□□□□□ -1.42
XRCC4-203ENST00000396027 KRTAP4-8Q9BYQ9 185 aa6.2□□□□□ -1.42
XRCC4-203ENST00000396027 ATP13A2Q9NQ11 1180 aa6.2□□□□□ -1.42
XRCC4-203ENST00000396027 PCDHB3Q9Y5E6 796 aa6.2□□□□□ -1.42
XRCC4-203ENST00000396027 CDCA7LQ96GN5 454 aa6.19□□□□□ -1.42
XRCC4-203ENST00000396027 CERKQ8TCT0 537 aa6.18□□□□□ -1.42
XRCC4-203ENST00000396027 EMILIN3Q9NT22 766 aa6.18□□□□□ -1.42
XRCC4-203ENST00000396027 PNMA3Q9UL41 463 aa6.18□□□□□ -1.42
XRCC4-203ENST00000396027 PPEF1O14829 653 aaPredicted RBP6.17□□□□□ -1.42
XRCC4-203ENST00000396027 S1PR4O95977 384 aa6.17□□□□□ -1.42
XRCC4-203ENST00000396027 PRSS12P56730 875 aa6.17□□□□□ -1.42
XRCC4-203ENST00000396027 LARP6Q9BRS8 491 aaKnown RBP6.17□□□□□ -1.42
XRCC4-203ENST00000396027 MFSD10Q14728 455 aa6.16□□□□□ -1.42
XRCC4-203ENST00000396027 TMEM151AQ8N4L1 468 aa6.16□□□□□ -1.42
XRCC4-203ENST00000396027 NXF1Q9UBU9 619 aaKnown RBP6.16□□□□□ -1.42
XRCC4-203ENST00000396027 RGL2O15211 777 aa6.15□□□□□ -1.42
XRCC4-203ENST00000396027 EN1Q05925 392 aaPredicted RBP6.15□□□□□ -1.43
XRCC4-203ENST00000396027 BLOC1S3Q6QNY0 202 aa6.15□□□□□ -1.43
XRCC4-203ENST00000396027 MAP3K7O43318 606 aa6.14□□□□□ -1.43
XRCC4-203ENST00000396027 RPIAP49247 311 aa6.13□□□□□ -1.43
XRCC4-203ENST00000396027 TLL1O43897 1013 aa6.12□□□□□ -1.43
XRCC4-203ENST00000396027 HS6ST3Q8IZP7 471 aa6.12□□□□□ -1.43
XRCC4-203ENST00000396027 FAM198AQ9UFP1 575 aa6.12□□□□□ -1.43
XRCC4-203ENST00000396027 GDF11O95390 407 aa6.11□□□□□ -1.43
XRCC4-203ENST00000396027 ADH1BP00325 375 aa6.11□□□□□ -1.43
XRCC4-203ENST00000396027 GSK3AP49840 483 aa6.11□□□□□ -1.43
XRCC4-203ENST00000396027 TSR1Q2NL82 804 aaKnown RBP6.11□□□□□ -1.43
XRCC4-203ENST00000396027 TTC24A2A3L6 582 aaPredicted RBP6.1□□□□□ -1.43
XRCC4-203ENST00000396027 CD2BP2O95400 341 aaKnown RBP6.1□□□□□ -1.43
XRCC4-203ENST00000396027 IGHA1P01876 353 aa6.1□□□□□ -1.43
XRCC4-203ENST00000396027 PLA2G2CQ5R387 149 aa6.1□□□□□ -1.43
XRCC4-203ENST00000396027 SWT1Q5T5J6 900 aaKnown RBP6.1□□□□□ -1.43
XRCC4-203ENST00000396027 NUDT18Q6ZVK8 323 aa6.1□□□□□ -1.43
XRCC4-203ENST00000396027 RNF225M0QZC1 329 aaPredicted RBP6.09□□□□□ -1.43
XRCC4-203ENST00000396027 SLC6A16Q9GZN6 736 aa6.09□□□□□ -1.43
XRCC4-203ENST00000396027 C3orf80F5H4A9 247 aa6.09□□□□□ -1.44
XRCC4-203ENST00000396027 RBM27Q9P2N5 1060 aaKnown RBP6.09□□□□□ -1.44
XRCC4-203ENST00000396027 H3BM21 787 aa6.08□□□□□ -1.44
XRCC4-203ENST00000396027 RASSF7Q02833 373 aa6.08□□□□□ -1.44
XRCC4-203ENST00000396027 NBR1Q14596 966 aa6.08□□□□□ -1.44
XRCC4-203ENST00000396027 ERICH6Q7L0X2 663 aa6.08□□□□□ -1.44
XRCC4-203ENST00000396027 DDX12PQ92771 950 aa6.08□□□□□ -1.44
XRCC4-203ENST00000396027 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.07□□□□□ -1.44
XRCC4-203ENST00000396027 PSMG3-AS1Q96PY0 264 aa6.06□□□□□ -1.44
XRCC4-203ENST00000396027 KRTAP9-2Q9BYQ4 174 aa6.06□□□□□ -1.44
XRCC4-203ENST00000396027 NR1I2O75469 434 aa6.04□□□□□ -1.44
XRCC4-203ENST00000396027 SNIP1Q8TAD8 396 aaKnown RBP6.04□□□□□ -1.44
XRCC4-203ENST00000396027 SMPD1P17405 629 aa6.04□□□□□ -1.44
XRCC4-203ENST00000396027 KMT5BQ4FZB7 885 aa6.04□□□□□ -1.44
XRCC4-203ENST00000396027 DNAJC5Q9H3Z4 198 aa6.04□□□□□ -1.44
XRCC4-203ENST00000396027 KRTAP9-6A0A140TA67 174 aa6.03□□□□□ -1.44
XRCC4-203ENST00000396027 ACTN4O43707 911 aaKnown RBP6.03□□□□□ -1.44
XRCC4-203ENST00000396027 ERBB4Q15303 1308 aa6.02□□□□□ -1.45
XRCC4-203ENST00000396027 DPYSL4O14531 572 aa6.01□□□□□ -1.45
XRCC4-203ENST00000396027 FOXK2Q01167 660 aa6.01□□□□□ -1.45
XRCC4-203ENST00000396027 KRTAP1-3Q8IUG1 177 aa6.01□□□□□ -1.45
XRCC4-203ENST00000396027 DNMT3AQ9Y6K1 912 aaPredicted RBP6□□□□□ -1.45
XRCC4-203ENST00000396027 CAMK2BQ13554 666 aa5.99□□□□□ -1.45
XRCC4-203ENST00000396027 GPAT2Q6NUI2 795 aa5.99□□□□□ -1.45
XRCC4-203ENST00000396027 WNT7AO00755 349 aa5.99□□□□□ -1.45
XRCC4-203ENST00000396027 PKD2Q13563 968 aa5.99□□□□□ -1.45
XRCC4-203ENST00000396027 VEGFBP49765 207 aa5.98□□□□□ -1.45
XRCC4-203ENST00000396027 VSIG8P0DPA2 414 aa5.97□□□□□ -1.45
XRCC4-203ENST00000396027 TTC13Q8NBP0 860 aa5.97□□□□□ -1.45
XRCC4-203ENST00000396027 ZBTB24O43167 697 aaPredicted RBP5.95□□□□□ -1.46
XRCC4-203ENST00000396027 SLC24A1O60721 1099 aa5.95□□□□□ -1.46
XRCC4-203ENST00000396027 NKX1-1Q15270 411 aaPredicted RBP5.95□□□□□ -1.46
XRCC4-203ENST00000396027 SPSB2Q99619 263 aa5.95□□□□□ -1.46
XRCC4-203ENST00000396027 HPS1Q92902 700 aa5.94□□□□□ -1.46
XRCC4-203ENST00000396027 FCF1Q9Y324 198 aaKnown RBP5.94□□□□□ -1.46
XRCC4-203ENST00000396027 J3QL48 77 aa5.94□□□□□ -1.46
XRCC4-203ENST00000396027 ADAM23O75077 832 aa5.94□□□□□ -1.46
XRCC4-203ENST00000396027 EYA1Q99502 592 aa5.94□□□□□ -1.46
XRCC4-203ENST00000396027 SPDYE16A6NNV3 312 aaPredicted RBP5.93□□□□□ -1.46
XRCC4-203ENST00000396027 CFHP08603 1231 aa5.93□□□□□ -1.46
XRCC4-203ENST00000396027 CHGAP10645 457 aaKnown RBP5.93□□□□□ -1.46
XRCC4-203ENST00000396027 PDIA6Q15084 440 aa5.93□□□□□ -1.46
XRCC4-203ENST00000396027 REPIN1Q9BWE0 567 aaKnown RBP5.93□□□□□ -1.46
XRCC4-203ENST00000396027 SCUBE3Q8IX30 993 aa5.92□□□□□ -1.46
XRCC4-203ENST00000396027 ADAMTS8Q9UP79 889 aa5.91□□□□□ -1.46
XRCC4-203ENST00000396027 KANK3Q6NY19 840 aa5.9□□□□□ -1.46
XRCC4-203ENST00000396027 DNAJB2P25686 324 aa5.89□□□□□ -1.47
XRCC4-203ENST00000396027 PADI6Q6TGC4 694 aa5.89□□□□□ -1.47
XRCC4-203ENST00000396027 MRGPRX2Q96LB1 330 aa5.89□□□□□ -1.47
XRCC4-203ENST00000396027 LCE3BQ5TA77 95 aa5.89□□□□□ -1.47
XRCC4-203ENST00000396027 CDHR5Q9HBB8 845 aa5.88□□□□□ -1.47
XRCC4-203ENST00000396027 BTBD11A6QL63 1104 aa5.87□□□□□ -1.47
XRCC4-203ENST00000396027 TRIM46Q7Z4K8 759 aa5.87□□□□□ -1.47
XRCC4-203ENST00000396027 PRIM1P49642 420 aaKnown RBP5.86□□□□□ -1.47
XRCC4-203ENST00000396027 TMEM134Q9H6X4 195 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms