RNA–Protein interactions for RNA: ENST00000395573.8

CNIH1-202, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 1 (best) BASIC

Gene CNIH1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-202ENST00000395573 E9PCH4 1651 aa17.07■□□□□ 0.32
CNIH1-202ENST00000395573 ANKRD50Q9ULJ7 1429 aa17.06■□□□□ 0.32
CNIH1-202ENST00000395573 LTKP29376 864 aa17.06■□□□□ 0.32
CNIH1-202ENST00000395573 ILDR2Q71H61 639 aa17.06■□□□□ 0.32
CNIH1-202ENST00000395573 TXNDC2Q86VQ3 553 aa17.06■□□□□ 0.32
CNIH1-202ENST00000395573 EID1Q9Y6B2 187 aa17.06■□□□□ 0.32
CNIH1-202ENST00000395573 RPRD2Q5VT52 1461 aaKnown RBP17.05■□□□□ 0.32
CNIH1-202ENST00000395573 NOS1P29475 1434 aa17.04■□□□□ 0.32
CNIH1-202ENST00000395573 TMEM2Q9UHN6 1383 aa17.04■□□□□ 0.32
CNIH1-202ENST00000395573 SLC4A2P04920 1241 aa17.04■□□□□ 0.32
CNIH1-202ENST00000395573 U3KPZ7 1027 aaPredicted RBP17.04■□□□□ 0.32
CNIH1-202ENST00000395573 IQGAP3Q86VI3 1631 aa17.03■□□□□ 0.32
CNIH1-202ENST00000395573 MED1Q15648 1581 aaPredicted RBP17.03■□□□□ 0.32
CNIH1-202ENST00000395573 HSPA1LP34931 641 aa17.02■□□□□ 0.32
CNIH1-202ENST00000395573 IDI1Q13907 227 aa17.02■□□□□ 0.32
CNIH1-202ENST00000395573 CHD2O14647 1828 aaKnown RBP17.01■□□□□ 0.31
CNIH1-202ENST00000395573 TMEM131LA2VDJ0 1609 aa17.01■□□□□ 0.31
CNIH1-202ENST00000395573 SPHKAPQ2M3C7 1700 aa16.97■□□□□ 0.31
CNIH1-202ENST00000395573 SLC4A1APQ9BWU0 796 aaKnown RBP16.97■□□□□ 0.31
CNIH1-202ENST00000395573 SLC52A1Q9NWF4 448 aa16.97■□□□□ 0.31
CNIH1-202ENST00000395573 NWD1Q149M9 1564 aa16.97■□□□□ 0.31
CNIH1-202ENST00000395573 SOCS7O14512 581 aa16.96■□□□□ 0.31
CNIH1-202ENST00000395573 ROCK1Q13464 1354 aa16.96■□□□□ 0.31
CNIH1-202ENST00000395573 ROBO1Q9Y6N7 1651 aa16.93■□□□□ 0.3
CNIH1-202ENST00000395573 ITGAEP38570 1179 aa16.92■□□□□ 0.3
CNIH1-202ENST00000395573 PPARGC1BQ86YN6 1023 aaKnown RBP16.92■□□□□ 0.3
CNIH1-202ENST00000395573 SLC26A8Q96RN1 970 aa16.92■□□□□ 0.3
CNIH1-202ENST00000395573 ZFYVE9O95405 1425 aa16.92■□□□□ 0.3
CNIH1-202ENST00000395573 NKTRP30414 1462 aaKnown RBP16.92■□□□□ 0.3
CNIH1-202ENST00000395573 RIMS2Q9UQ26 1411 aa16.91■□□□□ 0.3
CNIH1-202ENST00000395573 BCANQ96GW7 911 aa16.91■□□□□ 0.3
CNIH1-202ENST00000395573 KIF1BO60333 1816 aa16.89■□□□□ 0.29
CNIH1-202ENST00000395573 KCNA6P17658 529 aa16.89■□□□□ 0.29
CNIH1-202ENST00000395573 TMEM94Q12767 1356 aa16.89■□□□□ 0.29
CNIH1-202ENST00000395573 PPP1R15AO75807 674 aaPredicted RBP16.88■□□□□ 0.29
CNIH1-202ENST00000395573 DIP2AQ14689 1571 aa16.88■□□□□ 0.29
CNIH1-202ENST00000395573 PLEKHG1Q9ULL1 1385 aa16.88■□□□□ 0.29
CNIH1-202ENST00000395573 CHGAP10645 457 aaKnown RBP16.87■□□□□ 0.29
CNIH1-202ENST00000395573 PROSER2Q86WR7 435 aaPredicted RBP16.87■□□□□ 0.29
CNIH1-202ENST00000395573 NUP155O75694 1391 aa16.87■□□□□ 0.29
CNIH1-202ENST00000395573 PHLPP1O60346 1717 aa16.86■□□□□ 0.29
CNIH1-202ENST00000395573 HDGFP51858 240 aaKnown RBP16.85■□□□□ 0.29
CNIH1-202ENST00000395573 RBM33Q96EV2 1170 aaKnown RBP16.84■□□□□ 0.29
CNIH1-202ENST00000395573 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.83■□□□□ 0.28
CNIH1-202ENST00000395573 FAM135BQ49AJ0 1406 aa16.82■□□□□ 0.28
CNIH1-202ENST00000395573 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.82■□□□□ 0.28
CNIH1-202ENST00000395573 CLTCL1P53675 1640 aa16.81■□□□□ 0.28
CNIH1-202ENST00000395573 NRXN3Q9Y4C0 1643 aa16.81■□□□□ 0.28
CNIH1-202ENST00000395573 TRPM2O94759 1503 aa16.81■□□□□ 0.28
CNIH1-202ENST00000395573 MSH6P52701 1360 aa16.81■□□□□ 0.28
CNIH1-202ENST00000395573 RRBP1Q9P2E9 1410 aaKnown RBP16.8■□□□□ 0.28
CNIH1-202ENST00000395573 NUTM2DQ5VT03 806 aaPredicted RBP16.8■□□□□ 0.28
CNIH1-202ENST00000395573 ADAMTS13Q76LX8 1427 aa16.79■□□□□ 0.28
CNIH1-202ENST00000395573 TBX22Q9Y458 520 aa16.78■□□□□ 0.28
CNIH1-202ENST00000395573 XRN1Q8IZH2 1706 aaKnown RBP16.77■□□□□ 0.28
CNIH1-202ENST00000395573 SETBP1Q9Y6X0 1596 aa16.77■□□□□ 0.27
CNIH1-202ENST00000395573 NAIPQ13075 1403 aa16.75■□□□□ 0.27
CNIH1-202ENST00000395573 PIK3R4Q99570 1358 aa16.75■□□□□ 0.27
CNIH1-202ENST00000395573 COL16A1Q07092 1604 aaPredicted RBP16.74■□□□□ 0.27
CNIH1-202ENST00000395573 NCOA3Q9Y6Q9 1424 aa16.73■□□□□ 0.27
CNIH1-202ENST00000395573 C14orf37Q86TY3 774 aa16.73■□□□□ 0.27
CNIH1-202ENST00000395573 NEXMIFQ5QGS0 1516 aa16.73■□□□□ 0.27
CNIH1-202ENST00000395573 PPLO60437 1756 aa16.72■□□□□ 0.27
CNIH1-202ENST00000395573 ZNF326Q5BKZ1 582 aaKnown RBP16.72■□□□□ 0.27
CNIH1-202ENST00000395573 SLAIN2Q9P270 581 aa16.72■□□□□ 0.27
CNIH1-202ENST00000395573 SETD1AO15047 1707 aaKnown RBP16.71■□□□□ 0.27
CNIH1-202ENST00000395573 CAPN15O75808 1086 aa16.71■□□□□ 0.27
CNIH1-202ENST00000395573 PTPRUQ92729 1446 aa16.7■□□□□ 0.26
CNIH1-202ENST00000395573 NALCNQ8IZF0 1738 aa16.7■□□□□ 0.26
CNIH1-202ENST00000395573 SHPRHQ149N8 1683 aa16.7■□□□□ 0.26
CNIH1-202ENST00000395573 SPINK5Q9NQ38 1064 aaPredicted RBP16.7■□□□□ 0.26
CNIH1-202ENST00000395573 AHDC1Q5TGY3 1603 aaPredicted RBP16.68■□□□□ 0.26
CNIH1-202ENST00000395573 HFM1A2PYH4 1435 aa16.68■□□□□ 0.26
CNIH1-202ENST00000395573 AMOTL2Q9Y2J4 779 aa16.67■□□□□ 0.26
CNIH1-202ENST00000395573 NHSL1Q5SYE7 1610 aa16.67■□□□□ 0.26
CNIH1-202ENST00000395573 ATF3P18847 181 aa16.66■□□□□ 0.26
CNIH1-202ENST00000395573 CADPS2Q86UW7 1296 aa16.66■□□□□ 0.26
CNIH1-202ENST00000395573 C19orf44Q9H6X5 657 aa16.66■□□□□ 0.26
CNIH1-202ENST00000395573 TRIM52Q96A61 297 aa16.65■□□□□ 0.26
CNIH1-202ENST00000395573 RGS17Q9UGC6 210 aaPredicted RBP16.65■□□□□ 0.26
CNIH1-202ENST00000395573 JCADQ9P266 1359 aa16.64■□□□□ 0.26
CNIH1-202ENST00000395573 IFT172Q9UG01 1749 aa16.64■□□□□ 0.25
CNIH1-202ENST00000395573 DCCP43146 1447 aa16.63■□□□□ 0.25
CNIH1-202ENST00000395573 SAMD1Q6SPF0 538 aaPredicted RBP16.63■□□□□ 0.25
CNIH1-202ENST00000395573 METP08581 1390 aa16.63■□□□□ 0.25
CNIH1-202ENST00000395573 MYCNP04198 464 aaPredicted RBP16.61■□□□□ 0.25
CNIH1-202ENST00000395573 ASXL1Q8IXJ9 1541 aa16.6■□□□□ 0.25
CNIH1-202ENST00000395573 FOXD4L1Q9NU39 408 aa16.6■□□□□ 0.25
CNIH1-202ENST00000395573 MST1RQ04912 1400 aa16.58■□□□□ 0.24
CNIH1-202ENST00000395573 ADGRL3Q9HAR2 1447 aa16.58■□□□□ 0.24
CNIH1-202ENST00000395573 LRP6O75581 1613 aa16.58■□□□□ 0.24
CNIH1-202ENST00000395573 POTEAQ6S8J7 498 aa16.57■□□□□ 0.24
CNIH1-202ENST00000395573 BRINP3Q76B58 766 aa16.57■□□□□ 0.24
CNIH1-202ENST00000395573 SPATA31A6Q5VVP1 1343 aa16.55■□□□□ 0.24
CNIH1-202ENST00000395573 VGFO15240 615 aaPredicted RBP16.55■□□□□ 0.24
CNIH1-202ENST00000395573 PTCH1Q13635 1447 aa16.54■□□□□ 0.24
CNIH1-202ENST00000395573 LAMC1P11047 1609 aa16.54■□□□□ 0.24
CNIH1-202ENST00000395573 RPGRIP1LQ68CZ1 1315 aa16.53■□□□□ 0.24
CNIH1-202ENST00000395573 MEX3CQ5U5Q3 659 aaKnown RBP16.53■□□□□ 0.24
CNIH1-202ENST00000395573 KNDC1Q76NI1 1749 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms