RNA–Protein interactions for RNA: ENST00000395418.7

IFT20-203, Transcript of intraflagellar transport 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene IFT20, Length 825 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-203ENST00000395418 NKTRP30414 1462 aaKnown RBP23.98■■□□□ 1.43
IFT20-203ENST00000395418 SETD1AO15047 1707 aaKnown RBP23.98■■□□□ 1.43
IFT20-203ENST00000395418 FGD6Q6ZV73 1430 aa23.96■■□□□ 1.43
IFT20-203ENST00000395418 APLP2Q06481 763 aa23.96■■□□□ 1.43
IFT20-203ENST00000395418 GCC2Q8IWJ2 1684 aa23.95■■□□□ 1.43
IFT20-203ENST00000395418 MSH6P52701 1360 aa23.95■■□□□ 1.42
IFT20-203ENST00000395418 SLC52A1Q9NWF4 448 aa23.93■■□□□ 1.42
IFT20-203ENST00000395418 SLAIN2Q9P270 581 aa23.93■■□□□ 1.42
IFT20-203ENST00000395418 JCADQ9P266 1359 aa23.88■■□□□ 1.41
IFT20-203ENST00000395418 ZFYVE9O95405 1425 aa23.87■■□□□ 1.41
IFT20-203ENST00000395418 TMEM131LA2VDJ0 1609 aa23.87■■□□□ 1.41
IFT20-203ENST00000395418 COL16A1Q07092 1604 aaPredicted RBP23.87■■□□□ 1.41
IFT20-203ENST00000395418 PLEKHG1Q9ULL1 1385 aa23.86■■□□□ 1.41
IFT20-203ENST00000395418 RPRD2Q5VT52 1461 aaKnown RBP23.86■■□□□ 1.41
IFT20-203ENST00000395418 PPP1R15AO75807 674 aaPredicted RBP23.85■■□□□ 1.41
IFT20-203ENST00000395418 ADGRL2O95490 1459 aa23.85■■□□□ 1.41
IFT20-203ENST00000395418 RIMS2Q9UQ26 1411 aa23.84■■□□□ 1.41
IFT20-203ENST00000395418 HDGFP51858 240 aaKnown RBP23.83■■□□□ 1.41
IFT20-203ENST00000395418 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.83■■□□□ 1.41
IFT20-203ENST00000395418 ANKRD50Q9ULJ7 1429 aa23.81■■□□□ 1.4
IFT20-203ENST00000395418 C14orf37Q86TY3 774 aa23.8■■□□□ 1.4
IFT20-203ENST00000395418 TBX22Q9Y458 520 aa23.79■■□□□ 1.4
IFT20-203ENST00000395418 LRP6O75581 1613 aa23.78■■□□□ 1.4
IFT20-203ENST00000395418 CHGAP10645 457 aaKnown RBP23.78■■□□□ 1.4
IFT20-203ENST00000395418 FAM50AQ14320 339 aaKnown RBP23.78■■□□□ 1.4
IFT20-203ENST00000395418 E9PCH4 1651 aa23.78■■□□□ 1.4
IFT20-203ENST00000395418 NCOA3Q9Y6Q9 1424 aa23.77■■□□□ 1.4
IFT20-203ENST00000395418 SHPRHQ149N8 1683 aa23.77■■□□□ 1.4
IFT20-203ENST00000395418 NUTM2DQ5VT03 806 aaPredicted RBP23.77■■□□□ 1.4
IFT20-203ENST00000395418 MEX3CQ5U5Q3 659 aaKnown RBP23.76■■□□□ 1.39
IFT20-203ENST00000395418 SPATA31A6Q5VVP1 1343 aa23.76■■□□□ 1.39
IFT20-203ENST00000395418 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.75■■□□□ 1.39
IFT20-203ENST00000395418 UNC13BO14795 1591 aa23.74■■□□□ 1.39
IFT20-203ENST00000395418 AHDC1Q5TGY3 1603 aaPredicted RBP23.74■■□□□ 1.39
IFT20-203ENST00000395418 ADAMTS13Q76LX8 1427 aa23.74■■□□□ 1.39
IFT20-203ENST00000395418 DIP2AQ14689 1571 aa23.74■■□□□ 1.39
IFT20-203ENST00000395418 CADPS2Q86UW7 1296 aa23.73■■□□□ 1.39
IFT20-203ENST00000395418 ATF3P18847 181 aa23.72■■□□□ 1.39
IFT20-203ENST00000395418 ZNF772Q68DY9 489 aaPredicted RBP23.72■■□□□ 1.39
IFT20-203ENST00000395418 C19orf44Q9H6X5 657 aa23.72■■□□□ 1.39
IFT20-203ENST00000395418 TRIM52Q96A61 297 aa23.71■■□□□ 1.39
IFT20-203ENST00000395418 UPF1Q92900 1129 aaKnown RBP eCLIP23.69■■□□□ 1.38
IFT20-203ENST00000395418 PIK3R4Q99570 1358 aa23.68■■□□□ 1.38
IFT20-203ENST00000395418 TRPM2O94759 1503 aa23.68■■□□□ 1.38
IFT20-203ENST00000395418 IQGAP3Q86VI3 1631 aa23.66■■□□□ 1.38
IFT20-203ENST00000395418 AMOTL2Q9Y2J4 779 aa23.66■■□□□ 1.38
IFT20-203ENST00000395418 NUTM2BA6NNL0 878 aaPredicted RBP23.64■■□□□ 1.37
IFT20-203ENST00000395418 NUTM2EB1AL46 878 aaPredicted RBP23.64■■□□□ 1.37
IFT20-203ENST00000395418 BRINP3Q76B58 766 aa23.64■■□□□ 1.37
IFT20-203ENST00000395418 NUTM2AQ8IVF1 878 aaPredicted RBP23.64■■□□□ 1.37
IFT20-203ENST00000395418 PTPRUQ92729 1446 aa23.64■■□□□ 1.37
IFT20-203ENST00000395418 RXRBP28702 533 aa23.62■■□□□ 1.37
IFT20-203ENST00000395418 NHSL1Q5SYE7 1610 aa23.6■■□□□ 1.37
IFT20-203ENST00000395418 NRXN3Q9Y4C0 1643 aa23.59■■□□□ 1.37
IFT20-203ENST00000395418 XRN1Q8IZH2 1706 aaKnown RBP23.59■■□□□ 1.37
IFT20-203ENST00000395418 ASXL1Q8IXJ9 1541 aa23.58■■□□□ 1.36
IFT20-203ENST00000395418 DCCP43146 1447 aa23.57■■□□□ 1.36
IFT20-203ENST00000395418 SPHKAPQ2M3C7 1700 aa23.56■■□□□ 1.36
IFT20-203ENST00000395418 AFF2P51816 1311 aa23.56■■□□□ 1.36
IFT20-203ENST00000395418 NUP155O75694 1391 aa23.55■■□□□ 1.36
IFT20-203ENST00000395418 CDK12Q9NYV4 1490 aaPredicted RBP23.55■■□□□ 1.36
IFT20-203ENST00000395418 MST1RQ04912 1400 aa23.54■■□□□ 1.36
IFT20-203ENST00000395418 SETD5Q9C0A6 1442 aa23.54■■□□□ 1.36
IFT20-203ENST00000395418 ROCK1Q13464 1354 aa23.53■■□□□ 1.36
IFT20-203ENST00000395418 SETBP1Q9Y6X0 1596 aa23.53■■□□□ 1.36
IFT20-203ENST00000395418 LRRC59Q96AG4 307 aaKnown RBP23.51■■□□□ 1.35
IFT20-203ENST00000395418 NALCNQ8IZF0 1738 aa23.5■■□□□ 1.35
IFT20-203ENST00000395418 ZNF326Q5BKZ1 582 aaKnown RBP23.5■■□□□ 1.35
IFT20-203ENST00000395418 DDX17Q92841 729 aaKnown RBP23.49■■□□□ 1.35
IFT20-203ENST00000395418 C8orf37Q96NL8 207 aa23.48■■□□□ 1.35
IFT20-203ENST00000395418 METP08581 1390 aa23.48■■□□□ 1.35
IFT20-203ENST00000395418 ITGAEP38570 1179 aa23.47■■□□□ 1.35
IFT20-203ENST00000395418 QTRT2Q9H974 415 aaKnown RBP23.47■■□□□ 1.35
IFT20-203ENST00000395418 KIF1BO60333 1816 aa23.46■■□□□ 1.35
IFT20-203ENST00000395418 RGS12O14924 1447 aa23.44■■□□□ 1.34
IFT20-203ENST00000395418 ADGRL3Q9HAR2 1447 aa23.44■■□□□ 1.34
IFT20-203ENST00000395418 PNPLA6Q8IY17 1366 aa23.44■■□□□ 1.34
IFT20-203ENST00000395418 RBM6P78332 1123 aaKnown RBP23.44■■□□□ 1.34
IFT20-203ENST00000395418 CLTCL1P53675 1640 aa23.41■■□□□ 1.34
IFT20-203ENST00000395418 NEXMIFQ5QGS0 1516 aa23.41■■□□□ 1.34
IFT20-203ENST00000395418 NGLY1Q96IV0 654 aa23.39■■□□□ 1.33
IFT20-203ENST00000395418 ADAMTS2O95450 1211 aa23.38■■□□□ 1.33
IFT20-203ENST00000395418 LAMC1P11047 1609 aa23.37■■□□□ 1.33
IFT20-203ENST00000395418 C1orf167Q5SNV9 1468 aa23.36■■□□□ 1.33
IFT20-203ENST00000395418 ORAI2Q96SN7 254 aa23.32■■□□□ 1.32
IFT20-203ENST00000395418 USP21Q9UK80 565 aa23.31■■□□□ 1.32
IFT20-203ENST00000395418 SOS2Q07890 1332 aaPredicted RBP23.31■■□□□ 1.32
IFT20-203ENST00000395418 PPARGC1BQ86YN6 1023 aaKnown RBP23.29■■□□□ 1.32
IFT20-203ENST00000395418 MARF1Q9Y4F3 1742 aaKnown RBP23.29■■□□□ 1.32
IFT20-203ENST00000395418 ATAD2Q6PL18 1390 aa23.28■■□□□ 1.32
IFT20-203ENST00000395418 PTCH1Q13635 1447 aa23.28■■□□□ 1.32
IFT20-203ENST00000395418 ROBO2Q9HCK4 1378 aa23.27■■□□□ 1.32
IFT20-203ENST00000395418 COL22A1Q8NFW1 1626 aaPredicted RBP23.27■■□□□ 1.32
IFT20-203ENST00000395418 TRPC5Q9UL62 973 aaPredicted RBP23.27■■□□□ 1.32
IFT20-203ENST00000395418 PPLO60437 1756 aa23.26■■□□□ 1.31
IFT20-203ENST00000395418 VGFO15240 615 aaPredicted RBP23.25■■□□□ 1.31
IFT20-203ENST00000395418 FNBP4Q8N3X1 1017 aaPredicted RBP23.24■■□□□ 1.31
IFT20-203ENST00000395418 SRCAPQ6ZRS2 3230 aa23.24■■□□□ 1.31
IFT20-203ENST00000395418 EP400Q96L91 3159 aa23.22■■□□□ 1.31
IFT20-203ENST00000395418 ATRNO75882 1429 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms