RNA–Protein interactions for RNA: ENST00000395377.2

TFAM-203, Transcript of transcription factor A, mitochondrial, humanhuman

TSL 2

Gene TFAM, Length 663 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAM-203ENST00000395377 WBP1LQ9NX94 342 aa12.12□□□□□ -0.47
TFAM-203ENST00000395377 HPS5Q9UPZ3 1129 aa12.12□□□□□ -0.47
TFAM-203ENST00000395377 MINK1Q8N4C8 1332 aaPredicted RBP12.11□□□□□ -0.47
TFAM-203ENST00000395377 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.1□□□□□ -0.47
TFAM-203ENST00000395377 RNF40O75150 1001 aa12.09□□□□□ -0.47
TFAM-203ENST00000395377 TSR3Q9UJK0 312 aaKnown RBP12.08□□□□□ -0.48
TFAM-203ENST00000395377 KRI1Q8N9T8 703 aaKnown RBP12.07□□□□□ -0.48
TFAM-203ENST00000395377 HDGFP51858 240 aaKnown RBP12.06□□□□□ -0.48
TFAM-203ENST00000395377 GTF3C3Q9Y5Q9 886 aa12.06□□□□□ -0.48
TFAM-203ENST00000395377 PPP4CP60510 307 aa12.04□□□□□ -0.48
TFAM-203ENST00000395377 SLF2Q8IX21 1173 aa12.04□□□□□ -0.48
TFAM-203ENST00000395377 TIMELESSQ9UNS1 1208 aa12.04□□□□□ -0.48
TFAM-203ENST00000395377 TMEM132AQ24JP5 1023 aa12.03□□□□□ -0.48
TFAM-203ENST00000395377 SLC10A3P09131 477 aa12.01□□□□□ -0.49
TFAM-203ENST00000395377 APLP1P51693 650 aa12□□□□□ -0.49
TFAM-203ENST00000395377 MDM2Q00987 491 aaPredicted RBP12□□□□□ -0.49
TFAM-203ENST00000395377 SLC24A3Q9HC58 644 aa12□□□□□ -0.49
TFAM-203ENST00000395377 DAXXQ9UER7 740 aaPredicted RBP12□□□□□ -0.49
TFAM-203ENST00000395377 REPIN1Q9BWE0 567 aaKnown RBP11.97□□□□□ -0.49
TFAM-203ENST00000395377 DDX11L8A8MPP1 907 aa11.96□□□□□ -0.49
TFAM-203ENST00000395377 NYAP1Q6ZVC0 841 aa11.96□□□□□ -0.49
TFAM-203ENST00000395377 TRIM66O15016 1216 aa11.95□□□□□ -0.5
TFAM-203ENST00000395377 SLC4A3P48751 1232 aa11.95□□□□□ -0.5
TFAM-203ENST00000395377 TMUB1Q9BVT8 246 aa11.95□□□□□ -0.5
TFAM-203ENST00000395377 CFHP08603 1231 aa11.94□□□□□ -0.5
TFAM-203ENST00000395377 AK7Q96M32 723 aa11.94□□□□□ -0.5
TFAM-203ENST00000395377 AMHR2Q16671 573 aa11.92□□□□□ -0.5
TFAM-203ENST00000395377 RDH13Q8NBN7 331 aa11.92□□□□□ -0.5
TFAM-203ENST00000395377 GPCPD1Q9NPB8 672 aa11.91□□□□□ -0.5
TFAM-203ENST00000395377 PLA2G2EQ9NZK7 142 aa11.91□□□□□ -0.5
TFAM-203ENST00000395377 CLCN1P35523 988 aa11.9□□□□□ -0.5
TFAM-203ENST00000395377 BRPF1P55201 1214 aaPredicted RBP11.9□□□□□ -0.5
TFAM-203ENST00000395377 NECTIN2Q92692 538 aa11.9□□□□□ -0.5
TFAM-203ENST00000395377 TJAP1Q5JTD0 557 aa11.89□□□□□ -0.51
TFAM-203ENST00000395377 TTLL12Q14166 644 aaPredicted RBP11.88□□□□□ -0.51
TFAM-203ENST00000395377 SULF1Q8IWU6 871 aa11.88□□□□□ -0.51
TFAM-203ENST00000395377 PARP9Q8IXQ6 854 aa11.88□□□□□ -0.51
TFAM-203ENST00000395377 MTRQ99707 1265 aa11.88□□□□□ -0.51
TFAM-203ENST00000395377 FAM217BQ9NTX9 383 aaPredicted RBP11.88□□□□□ -0.51
TFAM-203ENST00000395377 ITGBL1O95965 494 aaPredicted RBP11.87□□□□□ -0.51
TFAM-203ENST00000395377 CD46P15529 392 aa11.87□□□□□ -0.51
TFAM-203ENST00000395377 ACTN4O43707 911 aaKnown RBP11.86□□□□□ -0.51
TFAM-203ENST00000395377 COPS2P61201 443 aa11.86□□□□□ -0.51
TFAM-203ENST00000395377 KMT5BQ4FZB7 885 aa11.86□□□□□ -0.51
TFAM-203ENST00000395377 GCGRP47871 477 aa11.85□□□□□ -0.51
TFAM-203ENST00000395377 PDE4DQ08499 809 aa11.85□□□□□ -0.51
TFAM-203ENST00000395377 RSPH4AQ5TD94 716 aa11.85□□□□□ -0.51
TFAM-203ENST00000395377 GIGYF2Q6Y7W6 1299 aaKnown RBP11.85□□□□□ -0.51
TFAM-203ENST00000395377 ZNF516Q92618 1163 aa11.85□□□□□ -0.51
TFAM-203ENST00000395377 PCDHB3Q9Y5E6 796 aa11.85□□□□□ -0.51
TFAM-203ENST00000395377 BLOC1S3Q6QNY0 202 aa11.84□□□□□ -0.51
TFAM-203ENST00000395377 ERICH6Q7L0X2 663 aa11.84□□□□□ -0.51
TFAM-203ENST00000395377 PRR14Q9BWN1 585 aa11.84□□□□□ -0.51
TFAM-203ENST00000395377 NEUROD2Q15784 382 aa11.83□□□□□ -0.52
TFAM-203ENST00000395377 SSTR3P32745 418 aaPredicted RBP11.82□□□□□ -0.52
TFAM-203ENST00000395377 FUT2Q10981 343 aa11.82□□□□□ -0.52
TFAM-203ENST00000395377 PUS10Q3MIT2 529 aaKnown RBP11.82□□□□□ -0.52
TFAM-203ENST00000395377 KCNC4Q03721 635 aa11.81□□□□□ -0.52
TFAM-203ENST00000395377 IL21Q9HBE4 155 aa11.81□□□□□ -0.52
TFAM-203ENST00000395377 MS4A1P11836 297 aa11.8□□□□□ -0.52
TFAM-203ENST00000395377 IFFO2Q5TF58 517 aa11.79□□□□□ -0.52
TFAM-203ENST00000395377 NKX2-3Q8TAU0 364 aa11.78□□□□□ -0.52
TFAM-203ENST00000395377 TLL1O43897 1013 aa11.76□□□□□ -0.53
TFAM-203ENST00000395377 ZPR1O75312 459 aa11.76□□□□□ -0.53
TFAM-203ENST00000395377 MORN1Q5T089 497 aa11.76□□□□□ -0.53
TFAM-203ENST00000395377 HLA-CQ95604 372 aa11.76□□□□□ -0.53
TFAM-203ENST00000395377 KDM4AO75164 1064 aa11.75□□□□□ -0.53
TFAM-203ENST00000395377 ATP6V1AP38606 617 aa11.75□□□□□ -0.53
TFAM-203ENST00000395377 C14orf37Q86TY3 774 aa11.75□□□□□ -0.53
TFAM-203ENST00000395377 GPBP1L1Q9HC44 474 aaPredicted RBP11.75□□□□□ -0.53
TFAM-203ENST00000395377 BEGAINQ9BUH8 593 aa11.74□□□□□ -0.53
TFAM-203ENST00000395377 SCUBE3Q8IX30 993 aa11.73□□□□□ -0.53
TFAM-203ENST00000395377 SLC27A5Q9Y2P5 690 aa11.72□□□□□ -0.53
TFAM-203ENST00000395377 A0A0G2JS52 829 aa11.71□□□□□ -0.53
TFAM-203ENST00000395377 GUCA2AQ02747 115 aa11.71□□□□□ -0.53
TFAM-203ENST00000395377 HOXA2O43364 376 aa11.7□□□□□ -0.54
TFAM-203ENST00000395377 NR1I2O75469 434 aa11.7□□□□□ -0.54
TFAM-203ENST00000395377 SPIRE2Q8WWL2 714 aa11.7□□□□□ -0.54
TFAM-203ENST00000395377 USP46P62068 366 aa11.68□□□□□ -0.54
TFAM-203ENST00000395377 NUTM1Q86Y26 1132 aa11.68□□□□□ -0.54
TFAM-203ENST00000395377 KDM4CQ9H3R0 1056 aa11.68□□□□□ -0.54
TFAM-203ENST00000395377 THAP11Q96EK4 314 aa11.67□□□□□ -0.54
TFAM-203ENST00000395377 RNF19BQ6ZMZ0 732 aa11.66□□□□□ -0.54
TFAM-203ENST00000395377 TBC1D2Q9BYX2 928 aa11.66□□□□□ -0.54
TFAM-203ENST00000395377 NDUFV2P19404 249 aa11.65□□□□□ -0.54
TFAM-203ENST00000395377 GRIPAP1Q4V328 841 aa11.65□□□□□ -0.54
TFAM-203ENST00000395377 PPP1R18Q6NYC8 613 aa11.65□□□□□ -0.54
TFAM-203ENST00000395377 MOXD2PA6NHM9 499 aa11.64□□□□□ -0.55
TFAM-203ENST00000395377 ADH1BP00325 375 aa11.64□□□□□ -0.55
TFAM-203ENST00000395377 BRICD5Q6PL45 260 aa11.63□□□□□ -0.55
TFAM-203ENST00000395377 SPSB2Q99619 263 aa11.63□□□□□ -0.55
TFAM-203ENST00000395377 FAM117AQ9C073 453 aa11.63□□□□□ -0.55
TFAM-203ENST00000395377 PCDHGC3Q9UN70 934 aa11.63□□□□□ -0.55
TFAM-203ENST00000395377 S1PR4O95977 384 aa11.61□□□□□ -0.55
TFAM-203ENST00000395377 FAM160A2Q8N612 972 aaPredicted RBP11.61□□□□□ -0.55
TFAM-203ENST00000395377 SYMPKQ92797 1274 aaKnown RBP11.61□□□□□ -0.55
TFAM-203ENST00000395377 FMNL1O95466 1100 aaPredicted RBP11.6□□□□□ -0.55
TFAM-203ENST00000395377 FDX1P10109 184 aa11.6□□□□□ -0.55
TFAM-203ENST00000395377 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.6□□□□□ -0.55
TFAM-203ENST00000395377 SALL2Q9Y467 1007 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms