RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 ANKRD30AQ9BXX3 1397 aa24.93■■□□□ 1.58
SNCA-205ENST00000394991 CHIC2Q9UKJ5 165 aa24.92■■□□□ 1.58
SNCA-205ENST00000394991 GCC2Q8IWJ2 1684 aa24.91■■□□□ 1.58
SNCA-205ENST00000394991 ADGRL2O95490 1459 aa24.88■■□□□ 1.57
SNCA-205ENST00000394991 ZFYVE9O95405 1425 aa24.87■■□□□ 1.57
SNCA-205ENST00000394991 MSH6P52701 1360 aa24.87■■□□□ 1.57
SNCA-205ENST00000394991 COL16A1Q07092 1604 aaPredicted RBP24.86■■□□□ 1.57
SNCA-205ENST00000394991 TMEM131LA2VDJ0 1609 aa24.84■■□□□ 1.57
SNCA-205ENST00000394991 RPRD2Q5VT52 1461 aaKnown RBP24.83■■□□□ 1.57
SNCA-205ENST00000394991 SLC52A1Q9NWF4 448 aa24.83■■□□□ 1.57
SNCA-205ENST00000394991 PLEKHG1Q9ULL1 1385 aa24.82■■□□□ 1.56
SNCA-205ENST00000394991 BCANQ96GW7 911 aa24.81■■□□□ 1.56
SNCA-205ENST00000394991 SLAIN2Q9P270 581 aa24.81■■□□□ 1.56
SNCA-205ENST00000394991 JCADQ9P266 1359 aa24.8■■□□□ 1.56
SNCA-205ENST00000394991 RIMS2Q9UQ26 1411 aa24.8■■□□□ 1.56
SNCA-205ENST00000394991 APLP2Q06481 763 aa24.79■■□□□ 1.56
SNCA-205ENST00000394991 LRP6O75581 1613 aa24.77■■□□□ 1.56
SNCA-205ENST00000394991 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.77■■□□□ 1.56
SNCA-205ENST00000394991 ANKRD50Q9ULJ7 1429 aa24.77■■□□□ 1.56
SNCA-205ENST00000394991 UNC13BO14795 1591 aa24.76■■□□□ 1.55
SNCA-205ENST00000394991 E9PCH4 1651 aa24.75■■□□□ 1.55
SNCA-205ENST00000394991 SHPRHQ149N8 1683 aa24.73■■□□□ 1.55
SNCA-205ENST00000394991 AHDC1Q5TGY3 1603 aaPredicted RBP24.73■■□□□ 1.55
SNCA-205ENST00000394991 ADAMTS13Q76LX8 1427 aa24.73■■□□□ 1.55
SNCA-205ENST00000394991 NCOA3Q9Y6Q9 1424 aa24.72■■□□□ 1.55
SNCA-205ENST00000394991 PPP1R15AO75807 674 aaPredicted RBP24.72■■□□□ 1.55
SNCA-205ENST00000394991 DIP2AQ14689 1571 aa24.71■■□□□ 1.55
SNCA-205ENST00000394991 TBX22Q9Y458 520 aa24.71■■□□□ 1.55
SNCA-205ENST00000394991 FAM50AQ14320 339 aaKnown RBP24.67■■□□□ 1.54
SNCA-205ENST00000394991 HDGFP51858 240 aaKnown RBP24.66■■□□□ 1.54
SNCA-205ENST00000394991 SPATA31A6Q5VVP1 1343 aa24.65■■□□□ 1.54
SNCA-205ENST00000394991 IQGAP3Q86VI3 1631 aa24.65■■□□□ 1.54
SNCA-205ENST00000394991 NUTM2DQ5VT03 806 aaPredicted RBP24.65■■□□□ 1.54
SNCA-205ENST00000394991 CHGAP10645 457 aaKnown RBP24.64■■□□□ 1.54
SNCA-205ENST00000394991 C14orf37Q86TY3 774 aa24.64■■□□□ 1.54
SNCA-205ENST00000394991 TRPM2O94759 1503 aa24.63■■□□□ 1.53
SNCA-205ENST00000394991 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.63■■□□□ 1.53
SNCA-205ENST00000394991 PIK3R4Q99570 1358 aa24.63■■□□□ 1.53
SNCA-205ENST00000394991 PTPRUQ92729 1446 aa24.61■■□□□ 1.53
SNCA-205ENST00000394991 CADPS2Q86UW7 1296 aa24.61■■□□□ 1.53
SNCA-205ENST00000394991 C19orf44Q9H6X5 657 aa24.6■■□□□ 1.53
SNCA-205ENST00000394991 XRN1Q8IZH2 1706 aaKnown RBP24.6■■□□□ 1.53
SNCA-205ENST00000394991 NRXN3Q9Y4C0 1643 aa24.6■■□□□ 1.53
SNCA-205ENST00000394991 MEX3CQ5U5Q3 659 aaKnown RBP24.59■■□□□ 1.53
SNCA-205ENST00000394991 ZNF772Q68DY9 489 aaPredicted RBP24.58■■□□□ 1.53
SNCA-205ENST00000394991 UPF1Q92900 1129 aaKnown RBP eCLIP24.58■■□□□ 1.53
SNCA-205ENST00000394991 ATF3P18847 181 aa24.57■■□□□ 1.52
SNCA-205ENST00000394991 TRIM52Q96A61 297 aa24.57■■□□□ 1.52
SNCA-205ENST00000394991 NHSL1Q5SYE7 1610 aa24.57■■□□□ 1.52
SNCA-205ENST00000394991 BRINP3Q76B58 766 aa24.56■■□□□ 1.52
SNCA-205ENST00000394991 ASXL1Q8IXJ9 1541 aa24.55■■□□□ 1.52
SNCA-205ENST00000394991 AMOTL2Q9Y2J4 779 aa24.54■■□□□ 1.52
SNCA-205ENST00000394991 DCCP43146 1447 aa24.53■■□□□ 1.52
SNCA-205ENST00000394991 SETBP1Q9Y6X0 1596 aa24.52■■□□□ 1.52
SNCA-205ENST00000394991 SPHKAPQ2M3C7 1700 aa24.52■■□□□ 1.52
SNCA-205ENST00000394991 ROCK1Q13464 1354 aa24.51■■□□□ 1.51
SNCA-205ENST00000394991 MST1RQ04912 1400 aa24.5■■□□□ 1.51
SNCA-205ENST00000394991 CDK12Q9NYV4 1490 aaPredicted RBP24.5■■□□□ 1.51
SNCA-205ENST00000394991 NUTM2BA6NNL0 878 aaPredicted RBP24.49■■□□□ 1.51
SNCA-205ENST00000394991 NUTM2EB1AL46 878 aaPredicted RBP24.49■■□□□ 1.51
SNCA-205ENST00000394991 NUTM2AQ8IVF1 878 aaPredicted RBP24.49■■□□□ 1.51
SNCA-205ENST00000394991 SETD5Q9C0A6 1442 aa24.49■■□□□ 1.51
SNCA-205ENST00000394991 RXRBP28702 533 aa24.48■■□□□ 1.51
SNCA-205ENST00000394991 NALCNQ8IZF0 1738 aa24.47■■□□□ 1.51
SNCA-205ENST00000394991 NUP155O75694 1391 aa24.46■■□□□ 1.51
SNCA-205ENST00000394991 AFF2P51816 1311 aa24.46■■□□□ 1.51
SNCA-205ENST00000394991 METP08581 1390 aa24.42■■□□□ 1.5
SNCA-205ENST00000394991 ADGRL3Q9HAR2 1447 aa24.41■■□□□ 1.5
SNCA-205ENST00000394991 RGS12O14924 1447 aa24.4■■□□□ 1.5
SNCA-205ENST00000394991 NEXMIFQ5QGS0 1516 aa24.4■■□□□ 1.5
SNCA-205ENST00000394991 CLTCL1P53675 1640 aa24.39■■□□□ 1.5
SNCA-205ENST00000394991 PNPLA6Q8IY17 1366 aa24.39■■□□□ 1.49
SNCA-205ENST00000394991 DDX17Q92841 729 aaKnown RBP24.38■■□□□ 1.49
SNCA-205ENST00000394991 LAMC1P11047 1609 aa24.36■■□□□ 1.49
SNCA-205ENST00000394991 LRRC59Q96AG4 307 aaKnown RBP24.36■■□□□ 1.49
SNCA-205ENST00000394991 KIF1BO60333 1816 aa24.34■■□□□ 1.49
SNCA-205ENST00000394991 ZNF326Q5BKZ1 582 aaKnown RBP24.34■■□□□ 1.49
SNCA-205ENST00000394991 C8orf37Q96NL8 207 aa24.34■■□□□ 1.49
SNCA-205ENST00000394991 ITGAEP38570 1179 aa24.32■■□□□ 1.48
SNCA-205ENST00000394991 QTRT2Q9H974 415 aaKnown RBP24.31■■□□□ 1.48
SNCA-205ENST00000394991 C1orf167Q5SNV9 1468 aa24.31■■□□□ 1.48
SNCA-205ENST00000394991 RBM6P78332 1123 aaKnown RBP24.3■■□□□ 1.48
SNCA-205ENST00000394991 PTCH1Q13635 1447 aa24.27■■□□□ 1.48
SNCA-205ENST00000394991 ADAMTS2O95450 1211 aa24.25■■□□□ 1.47
SNCA-205ENST00000394991 COL22A1Q8NFW1 1626 aaPredicted RBP24.24■■□□□ 1.47
SNCA-205ENST00000394991 ROBO2Q9HCK4 1378 aa24.22■■□□□ 1.47
SNCA-205ENST00000394991 NGLY1Q96IV0 654 aa24.22■■□□□ 1.47
SNCA-205ENST00000394991 SOS2Q07890 1332 aaPredicted RBP24.21■■□□□ 1.47
SNCA-205ENST00000394991 ORAI2Q96SN7 254 aa24.21■■□□□ 1.47
SNCA-205ENST00000394991 PRAG1Q86YV5 1406 aa24.2■■□□□ 1.46
SNCA-205ENST00000394991 MARF1Q9Y4F3 1742 aaKnown RBP24.19■■□□□ 1.46
SNCA-205ENST00000394991 PPLO60437 1756 aa24.19■■□□□ 1.46
SNCA-205ENST00000394991 ATAD2Q6PL18 1390 aa24.17■■□□□ 1.46
SNCA-205ENST00000394991 USP21Q9UK80 565 aa24.16■■□□□ 1.46
SNCA-205ENST00000394991 ATRNO75882 1429 aa24.16■■□□□ 1.46
SNCA-205ENST00000394991 PPARGC1BQ86YN6 1023 aaKnown RBP24.15■■□□□ 1.46
SNCA-205ENST00000394991 MYOM2P54296 1465 aa24.13■■□□□ 1.45
SNCA-205ENST00000394991 CDC42BPGQ6DT37 1551 aa24.13■■□□□ 1.45
SNCA-205ENST00000394991 FNBP4Q8N3X1 1017 aaPredicted RBP24.13■■□□□ 1.45
SNCA-205ENST00000394991 TRPC5Q9UL62 973 aaPredicted RBP24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms