RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 BCANQ96GW7 911 aa30.8■■■□□ 2.52
UPK3B-203ENST00000394849 RPRD2Q5VT52 1461 aaKnown RBP30.8■■■□□ 2.52
UPK3B-203ENST00000394849 CHIC2Q9UKJ5 165 aa30.79■■■□□ 2.52
UPK3B-203ENST00000394849 SLAIN2Q9P270 581 aa30.78■■■□□ 2.52
UPK3B-203ENST00000394849 RBM33Q96EV2 1170 aaKnown RBP30.75■■■□□ 2.51
UPK3B-203ENST00000394849 JCADQ9P266 1359 aa30.75■■■□□ 2.51
UPK3B-203ENST00000394849 PLEKHG1Q9ULL1 1385 aa30.74■■■□□ 2.51
UPK3B-203ENST00000394849 ADGRL2O95490 1459 aa30.74■■■□□ 2.51
UPK3B-203ENST00000394849 PHLPP1O60346 1717 aa30.73■■■□□ 2.51
UPK3B-203ENST00000394849 CHD2O14647 1828 aaKnown RBP30.72■■■□□ 2.51
UPK3B-203ENST00000394849 NCOA3Q9Y6Q9 1424 aa30.72■■■□□ 2.51
UPK3B-203ENST00000394849 ZFYVE9O95405 1425 aa30.71■■■□□ 2.51
UPK3B-203ENST00000394849 PPP1R15AO75807 674 aaPredicted RBP30.69■■■□□ 2.5
UPK3B-203ENST00000394849 TBX22Q9Y458 520 aa30.67■■■□□ 2.5
UPK3B-203ENST00000394849 ANKRD50Q9ULJ7 1429 aa30.66■■■□□ 2.5
UPK3B-203ENST00000394849 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.66■■■□□ 2.5
UPK3B-203ENST00000394849 RIMS2Q9UQ26 1411 aa30.65■■■□□ 2.5
UPK3B-203ENST00000394849 MYO5BQ9ULV0 1848 aa30.63■■■□□ 2.49
UPK3B-203ENST00000394849 TMEM131LA2VDJ0 1609 aa30.62■■■□□ 2.49
UPK3B-203ENST00000394849 GCC2Q8IWJ2 1684 aa30.62■■■□□ 2.49
UPK3B-203ENST00000394849 SPATA31A6Q5VVP1 1343 aa30.62■■■□□ 2.49
UPK3B-203ENST00000394849 COL16A1Q07092 1604 aaPredicted RBP30.6■■■□□ 2.49
UPK3B-203ENST00000394849 CADPS2Q86UW7 1296 aa30.59■■■□□ 2.49
UPK3B-203ENST00000394849 PIK3R4Q99570 1358 aa30.58■■■□□ 2.49
UPK3B-203ENST00000394849 C14orf37Q86TY3 774 aa30.58■■■□□ 2.49
UPK3B-203ENST00000394849 C19orf44Q9H6X5 657 aa30.57■■■□□ 2.48
UPK3B-203ENST00000394849 DIP2AQ14689 1571 aa30.57■■■□□ 2.48
UPK3B-203ENST00000394849 ZNF772Q68DY9 489 aaPredicted RBP30.56■■■□□ 2.48
UPK3B-203ENST00000394849 FAM50AQ14320 339 aaKnown RBP30.55■■■□□ 2.48
UPK3B-203ENST00000394849 ATF3P18847 181 aa30.54■■■□□ 2.48
UPK3B-203ENST00000394849 SETD1AO15047 1707 aaKnown RBP30.53■■■□□ 2.48
UPK3B-203ENST00000394849 AHDC1Q5TGY3 1603 aaPredicted RBP30.52■■■□□ 2.48
UPK3B-203ENST00000394849 MEX3CQ5U5Q3 659 aaKnown RBP30.52■■■□□ 2.48
UPK3B-203ENST00000394849 UNC13BO14795 1591 aa30.51■■■□□ 2.47
UPK3B-203ENST00000394849 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.5■■■□□ 2.47
UPK3B-203ENST00000394849 ADAMTS13Q76LX8 1427 aa30.5■■■□□ 2.47
UPK3B-203ENST00000394849 CHGAP10645 457 aaKnown RBP30.5■■■□□ 2.47
UPK3B-203ENST00000394849 SHPRHQ149N8 1683 aa30.49■■■□□ 2.47
UPK3B-203ENST00000394849 LRP6O75581 1613 aa30.47■■■□□ 2.47
UPK3B-203ENST00000394849 TRPM2O94759 1503 aa30.45■■■□□ 2.47
UPK3B-203ENST00000394849 E9PCH4 1651 aa30.45■■■□□ 2.46
UPK3B-203ENST00000394849 DCCP43146 1447 aa30.42■■■□□ 2.46
UPK3B-203ENST00000394849 ROCK1Q13464 1354 aa30.41■■■□□ 2.46
UPK3B-203ENST00000394849 UPF1Q92900 1129 aaKnown RBP eCLIP30.4■■■□□ 2.46
UPK3B-203ENST00000394849 AMOTL2Q9Y2J4 779 aa30.4■■■□□ 2.46
UPK3B-203ENST00000394849 IQGAP3Q86VI3 1631 aa30.4■■■□□ 2.46
UPK3B-203ENST00000394849 NUTM2DQ5VT03 806 aaPredicted RBP30.39■■■□□ 2.46
UPK3B-203ENST00000394849 RXRBP28702 533 aa30.38■■■□□ 2.45
UPK3B-203ENST00000394849 BRINP3Q76B58 766 aa30.38■■■□□ 2.45
UPK3B-203ENST00000394849 TRIM52Q96A61 297 aa30.36■■■□□ 2.45
UPK3B-203ENST00000394849 CDK12Q9NYV4 1490 aaPredicted RBP30.36■■■□□ 2.45
UPK3B-203ENST00000394849 PTPRUQ92729 1446 aa30.32■■■□□ 2.44
UPK3B-203ENST00000394849 SETD5Q9C0A6 1442 aa30.31■■■□□ 2.44
UPK3B-203ENST00000394849 NUP155O75694 1391 aa30.3■■■□□ 2.44
UPK3B-203ENST00000394849 ASXL1Q8IXJ9 1541 aa30.29■■■□□ 2.44
UPK3B-203ENST00000394849 SETBP1Q9Y6X0 1596 aa30.28■■■□□ 2.44
UPK3B-203ENST00000394849 XRN1Q8IZH2 1706 aaKnown RBP30.28■■■□□ 2.44
UPK3B-203ENST00000394849 NUTM2BA6NNL0 878 aaPredicted RBP30.28■■■□□ 2.44
UPK3B-203ENST00000394849 NUTM2EB1AL46 878 aaPredicted RBP30.28■■■□□ 2.44
UPK3B-203ENST00000394849 NUTM2AQ8IVF1 878 aaPredicted RBP30.28■■■□□ 2.44
UPK3B-203ENST00000394849 LRRC59Q96AG4 307 aaKnown RBP30.28■■■□□ 2.44
UPK3B-203ENST00000394849 NHSL1Q5SYE7 1610 aa30.25■■■□□ 2.43
UPK3B-203ENST00000394849 MST1RQ04912 1400 aa30.25■■■□□ 2.43
UPK3B-203ENST00000394849 AFF2P51816 1311 aa30.24■■■□□ 2.43
UPK3B-203ENST00000394849 NRXN3Q9Y4C0 1643 aa30.23■■■□□ 2.43
UPK3B-203ENST00000394849 SPHKAPQ2M3C7 1700 aa30.19■■■□□ 2.42
UPK3B-203ENST00000394849 ZNF326Q5BKZ1 582 aaKnown RBP30.19■■■□□ 2.42
UPK3B-203ENST00000394849 ADGRL3Q9HAR2 1447 aa30.18■■■□□ 2.42
UPK3B-203ENST00000394849 METP08581 1390 aa30.16■■■□□ 2.42
UPK3B-203ENST00000394849 RBM6P78332 1123 aaKnown RBP30.16■■■□□ 2.42
UPK3B-203ENST00000394849 PNPLA6Q8IY17 1366 aa30.14■■■□□ 2.41
UPK3B-203ENST00000394849 C8orf37Q96NL8 207 aa30.13■■■□□ 2.41
UPK3B-203ENST00000394849 QTRT2Q9H974 415 aaKnown RBP30.13■■■□□ 2.41
UPK3B-203ENST00000394849 NGLY1Q96IV0 654 aa30.09■■■□□ 2.41
UPK3B-203ENST00000394849 NALCNQ8IZF0 1738 aa30.08■■■□□ 2.41
UPK3B-203ENST00000394849 RGS12O14924 1447 aa30.07■■■□□ 2.4
UPK3B-203ENST00000394849 ITGAEP38570 1179 aa30.06■■■□□ 2.4
UPK3B-203ENST00000394849 LAMC1P11047 1609 aa30.06■■■□□ 2.4
UPK3B-203ENST00000394849 NEXMIFQ5QGS0 1516 aa30.06■■■□□ 2.4
UPK3B-203ENST00000394849 C1orf167Q5SNV9 1468 aa30.04■■■□□ 2.4
UPK3B-203ENST00000394849 DDX17Q92841 729 aaKnown RBP30.03■■■□□ 2.4
UPK3B-203ENST00000394849 KIF1BO60333 1816 aa30.02■■■□□ 2.4
UPK3B-203ENST00000394849 PTCH1Q13635 1447 aa30.02■■■□□ 2.4
UPK3B-203ENST00000394849 CLTCL1P53675 1640 aa30■■■□□ 2.39
UPK3B-203ENST00000394849 VGFO15240 615 aaPredicted RBP30■■■□□ 2.39
UPK3B-203ENST00000394849 SOS2Q07890 1332 aaPredicted RBP29.99■■■□□ 2.39
UPK3B-203ENST00000394849 ADAMTS2O95450 1211 aa29.99■■■□□ 2.39
UPK3B-203ENST00000394849 FOXD1Q16676 465 aa29.99■■■□□ 2.39
UPK3B-203ENST00000394849 ATAD2Q6PL18 1390 aa29.98■■■□□ 2.39
UPK3B-203ENST00000394849 TRPC5Q9UL62 973 aaPredicted RBP29.96■■■□□ 2.39
UPK3B-203ENST00000394849 PRAG1Q86YV5 1406 aa29.96■■■□□ 2.39
UPK3B-203ENST00000394849 USP21Q9UK80 565 aa29.95■■■□□ 2.39
UPK3B-203ENST00000394849 FNBP4Q8N3X1 1017 aaPredicted RBP29.93■■■□□ 2.38
UPK3B-203ENST00000394849 RPGRIP1LQ68CZ1 1315 aa29.92■■■□□ 2.38
UPK3B-203ENST00000394849 ROBO2Q9HCK4 1378 aa29.91■■■□□ 2.38
UPK3B-203ENST00000394849 HFM1A2PYH4 1435 aa29.91■■■□□ 2.38
UPK3B-203ENST00000394849 ORAI2Q96SN7 254 aa29.91■■■□□ 2.38
UPK3B-203ENST00000394849 SRCAPQ6ZRS2 3230 aa29.9■■■□□ 2.38
UPK3B-203ENST00000394849 COL22A1Q8NFW1 1626 aaPredicted RBP29.89■■■□□ 2.37
UPK3B-203ENST00000394849 CCDC125Q86Z20 511 aa29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms