RNA–Protein interactions for RNA: ENST00000393820.2

NPM1-203, Transcript of nucleophosmin 1, humanhuman

TSL 1 (best) BASIC

Gene NPM1, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-203ENST00000393820 ZDHHC16Q969W1 377 aa8.88□□□□□ -0.99
NPM1-203ENST00000393820 TOPBP1Q92547 1522 aa8.87□□□□□ -0.99
NPM1-203ENST00000393820 AK7Q96M32 723 aa8.86□□□□□ -0.99
NPM1-203ENST00000393820 ADAM33Q9BZ11 813 aa8.86□□□□□ -0.99
NPM1-203ENST00000393820 GPBP1L1Q9HC44 474 aaPredicted RBP8.86□□□□□ -0.99
NPM1-203ENST00000393820 RABGEF1Q9UJ41 708 aa8.86□□□□□ -0.99
NPM1-203ENST00000393820 PCDHGA10Q9Y5H3 936 aa8.86□□□□□ -0.99
NPM1-203ENST00000393820 RBM33Q96EV2 1170 aaKnown RBP8.86□□□□□ -0.99
NPM1-203ENST00000393820 GFRA3O60609 400 aa8.85□□□□□ -0.99
NPM1-203ENST00000393820 GPIHBP1Q8IV16 184 aa8.85□□□□□ -0.99
NPM1-203ENST00000393820 DNMBPQ6XZF7 1577 aa8.85□□□□□ -0.99
NPM1-203ENST00000393820 BCAMP50895 628 aa8.84□□□□□ -0.99
NPM1-203ENST00000393820 PCGF6Q9BYE7 350 aa8.84□□□□□ -0.99
NPM1-203ENST00000393820 ZNF608Q9ULD9 1512 aaPredicted RBP8.84□□□□□ -0.99
NPM1-203ENST00000393820 SOWAHBA6NEL2 793 aa8.83□□□□□ -1
NPM1-203ENST00000393820 LCE2BO14633 110 aa8.83□□□□□ -1
NPM1-203ENST00000393820 LAPTM4BQ86VI4 370 aa8.83□□□□□ -1
NPM1-203ENST00000393820 PPP1R3GB7ZBB8 358 aa8.82□□□□□ -1
NPM1-203ENST00000393820 PHF14O94880 888 aa8.82□□□□□ -1
NPM1-203ENST00000393820 KDM4CQ9H3R0 1056 aa8.82□□□□□ -1
NPM1-203ENST00000393820 RIMBP3CA6NJZ7 1639 aa8.81□□□□□ -1
NPM1-203ENST00000393820 RIMBP3BA6NNM3 1639 aa8.81□□□□□ -1
NPM1-203ENST00000393820 RIMBP3Q9UFD9 1639 aa8.81□□□□□ -1
NPM1-203ENST00000393820 NUTM2FA1L443 756 aa8.81□□□□□ -1
NPM1-203ENST00000393820 TSR1Q2NL82 804 aaKnown RBP8.81□□□□□ -1
NPM1-203ENST00000393820 ARHGEF11O15085 1522 aa8.81□□□□□ -1
NPM1-203ENST00000393820 CDHR5Q9HBB8 845 aa8.8□□□□□ -1
NPM1-203ENST00000393820 WDR97A6NE52 1622 aa8.8□□□□□ -1
NPM1-203ENST00000393820 EIF4G3O43432 1585 aaKnown RBP8.79□□□□□ -1
NPM1-203ENST00000393820 MAP3K7O43318 606 aa8.79□□□□□ -1
NPM1-203ENST00000393820 TYW1BQ6NUM6 668 aa8.79□□□□□ -1
NPM1-203ENST00000393820 WBP1LQ9NX94 342 aa8.79□□□□□ -1
NPM1-203ENST00000393820 TARBP1Q13395 1621 aaKnown RBP8.79□□□□□ -1
NPM1-203ENST00000393820 EN1Q05925 392 aaPredicted RBP8.78□□□□□ -1
NPM1-203ENST00000393820 PROX2Q3B8N5 592 aa8.78□□□□□ -1
NPM1-203ENST00000393820 IL27Q8NEV9 243 aa8.78□□□□□ -1
NPM1-203ENST00000393820 EPAS1Q99814 870 aa8.78□□□□□ -1
NPM1-203ENST00000393820 TRIM66O15016 1216 aa8.78□□□□□ -1
NPM1-203ENST00000393820 KRI1Q8N9T8 703 aaKnown RBP8.78□□□□□ -1
NPM1-203ENST00000393820 ZFRQ96KR1 1074 aaKnown RBP8.78□□□□□ -1
NPM1-203ENST00000393820 POLA1P09884 1462 aaPredicted RBP8.77□□□□□ -1
NPM1-203ENST00000393820 AQRO60306 1485 aaKnown RBP eCLIP8.77□□□□□ -1.012e-9■■■■□ 22.4
NPM1-203ENST00000393820 NRG2O14511 850 aaPredicted RBP8.76□□□□□ -1.01
NPM1-203ENST00000393820 GPR37O15354 613 aa8.76□□□□□ -1.01
NPM1-203ENST00000393820 PDE4DQ08499 809 aa8.76□□□□□ -1.01
NPM1-203ENST00000393820 SOGA1O94964 1423 aa8.76□□□□□ -1.01
NPM1-203ENST00000393820 CYB5RLQ6IPT4 315 aa8.75□□□□□ -1.01
NPM1-203ENST00000393820 ZMYND15Q9H091 742 aa8.75□□□□□ -1.01
NPM1-203ENST00000393820 TRIM26Q12899 539 aaPredicted RBP8.74□□□□□ -1.01
NPM1-203ENST00000393820 C6orf132Q5T0Z8 1188 aa8.74□□□□□ -1.01
NPM1-203ENST00000393820 NPDC1Q9NQX5 325 aaPredicted RBP8.74□□□□□ -1.01
NPM1-203ENST00000393820 COL9A1P20849 921 aa8.73□□□□□ -1.01
NPM1-203ENST00000393820 FECHP22830 423 aa8.73□□□□□ -1.01
NPM1-203ENST00000393820 FBXW7Q969H0 707 aa8.73□□□□□ -1.01
NPM1-203ENST00000393820 KIAA1468Q9P260 1216 aa8.73□□□□□ -1.01
NPM1-203ENST00000393820 ONECUT3O60422 494 aaPredicted RBP8.73□□□□□ -1.01
NPM1-203ENST00000393820 UBTFP17480 764 aaKnown RBP8.73□□□□□ -1.01
NPM1-203ENST00000393820 ZNF787Q6DD87 383 aa8.73□□□□□ -1.01
NPM1-203ENST00000393820 RSPH6AQ9H0K4 717 aa8.73□□□□□ -1.01
NPM1-203ENST00000393820 TSR3Q9UJK0 312 aaKnown RBP8.73□□□□□ -1.01
NPM1-203ENST00000393820 MAGI1Q96QZ7 1491 aaPredicted RBP8.73□□□□□ -1.01
NPM1-203ENST00000393820 PTGDRQ13258 359 aa8.72□□□□□ -1.01
NPM1-203ENST00000393820 CHD1O14646 1710 aa8.72□□□□□ -1.01
NPM1-203ENST00000393820 ZEB1P37275 1124 aaPredicted RBP8.71□□□□□ -1.02
NPM1-203ENST00000393820 CHMP7Q8WUX9 453 aaPredicted RBP8.71□□□□□ -1.02
NPM1-203ENST00000393820 PRKD2Q9BZL6 878 aa8.71□□□□□ -1.02
NPM1-203ENST00000393820 TDRD9Q8NDG6 1382 aaKnown RBP8.71□□□□□ -1.02
NPM1-203ENST00000393820 GRIN2BQ13224 1484 aa8.7□□□□□ -1.02
NPM1-203ENST00000393820 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.7□□□□□ -1.02
NPM1-203ENST00000393820 FGD5Q6ZNL6 1462 aa8.7□□□□□ -1.02
NPM1-203ENST00000393820 ARAP1Q96P48 1450 aa8.7□□□□□ -1.02
NPM1-203ENST00000393820 RAD54L2Q9Y4B4 1467 aa8.7□□□□□ -1.02
NPM1-203ENST00000393820 FCHSD2O94868 740 aa8.69□□□□□ -1.02
NPM1-203ENST00000393820 HPS5Q9UPZ3 1129 aa8.69□□□□□ -1.02
NPM1-203ENST00000393820 SYNJ1O43426 1573 aa8.69□□□□□ -1.02
NPM1-203ENST00000393820 LRCH3Q96II8 777 aa8.69□□□□□ -1.02
NPM1-203ENST00000393820 FAM117AQ9C073 453 aa8.69□□□□□ -1.02
NPM1-203ENST00000393820 SEPT9Q9UHD8 586 aaPredicted RBP8.69□□□□□ -1.02
NPM1-203ENST00000393820 SYNJ2O15056 1496 aa8.68□□□□□ -1.02
NPM1-203ENST00000393820 FAM98CQ17RN3 349 aaKnown RBP8.68□□□□□ -1.02
NPM1-203ENST00000393820 V9GY48 417 aaPredicted RBP8.68□□□□□ -1.02
NPM1-203ENST00000393820 SNAPC4Q5SXM2 1469 aa8.68□□□□□ -1.02
NPM1-203ENST00000393820 LOC105371045A0A1W2PR82 267 aa8.67□□□□□ -1.02
NPM1-203ENST00000393820 GNPATO15228 680 aa8.67□□□□□ -1.02
NPM1-203ENST00000393820 CUX1P39880 1505 aa8.67□□□□□ -1.02
NPM1-203ENST00000393820 FAM161AQ3B820 660 aa8.67□□□□□ -1.02
NPM1-203ENST00000393820 CLASP1Q7Z460 1538 aa8.67□□□□□ -1.02
NPM1-203ENST00000393820 PPARGC1BQ86YN6 1023 aaKnown RBP8.67□□□□□ -1.02
NPM1-203ENST00000393820 PODXL2Q9NZ53 605 aa8.67□□□□□ -1.02
NPM1-203ENST00000393820 PLEKHG3A1L390 1219 aa8.65□□□□□ -1.02
NPM1-203ENST00000393820 HIC1Q14526 733 aa8.65□□□□□ -1.02
NPM1-203ENST00000393820 ZNF775Q96BV0 537 aaPredicted RBP8.65□□□□□ -1.02
NPM1-203ENST00000393820 GAPVD1Q14C86 1478 aa8.65□□□□□ -1.02
NPM1-203ENST00000393820 PADI6Q6TGC4 694 aa8.65□□□□□ -1.03
NPM1-203ENST00000393820 ABCA10Q8WWZ4 1543 aa8.64□□□□□ -1.03
NPM1-203ENST00000393820 MINK1Q8N4C8 1332 aaPredicted RBP8.64□□□□□ -1.03
NPM1-203ENST00000393820 CCDC102AQ96A19 550 aa8.64□□□□□ -1.03
NPM1-203ENST00000393820 C1orf115Q9H7X2 142 aa8.64□□□□□ -1.03
NPM1-203ENST00000393820 FAM198AQ9UFP1 575 aa8.64□□□□□ -1.03
NPM1-203ENST00000393820 TRIM6-TRIM34B2RNG4 842 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms