RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 RGS17Q9UGC6 210 aaPredicted RBP28.66■■■□□ 2.18
SNCB-202ENST00000393693 ZFYVE9O95405 1425 aa28.63■■■□□ 2.17
SNCB-202ENST00000393693 NWD1Q149M9 1564 aa28.62■■■□□ 2.17
SNCB-202ENST00000393693 RIMS2Q9UQ26 1411 aa28.61■■■□□ 2.17
SNCB-202ENST00000393693 PPP1R15AO75807 674 aaPredicted RBP28.61■■■□□ 2.17
SNCB-202ENST00000393693 NKTRP30414 1462 aaKnown RBP28.6■■■□□ 2.17
SNCB-202ENST00000393693 CHGAP10645 457 aaKnown RBP28.6■■■□□ 2.17
SNCB-202ENST00000393693 PLEKHG1Q9ULL1 1385 aa28.6■■■□□ 2.17
SNCB-202ENST00000393693 MYO5BQ9ULV0 1848 aa28.59■■■□□ 2.17
SNCB-202ENST00000393693 GCC2Q8IWJ2 1684 aa28.58■■■□□ 2.17
SNCB-202ENST00000393693 ROBO1Q9Y6N7 1651 aa28.58■■■□□ 2.17
SNCB-202ENST00000393693 NUTM2DQ5VT03 806 aaPredicted RBP28.58■■■□□ 2.17
SNCB-202ENST00000393693 TMEM131LA2VDJ0 1609 aa28.58■■■□□ 2.17
SNCB-202ENST00000393693 UNC13BO14795 1591 aa28.57■■■□□ 2.16
SNCB-202ENST00000393693 HDGFP51858 240 aaKnown RBP28.56■■■□□ 2.16
SNCB-202ENST00000393693 MSH6P52701 1360 aa28.56■■■□□ 2.16
SNCB-202ENST00000393693 SLAIN2Q9P270 581 aa28.53■■■□□ 2.16
SNCB-202ENST00000393693 ITGAEP38570 1179 aa28.52■■■□□ 2.16
SNCB-202ENST00000393693 TBX22Q9Y458 520 aa28.52■■■□□ 2.16
SNCB-202ENST00000393693 E9PCH4 1651 aa28.51■■■□□ 2.16
SNCB-202ENST00000393693 ROCK1Q13464 1354 aa28.51■■■□□ 2.16
SNCB-202ENST00000393693 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.5■■■□□ 2.15
SNCB-202ENST00000393693 CHD2O14647 1828 aaKnown RBP28.5■■■□□ 2.15
SNCB-202ENST00000393693 PPARGC1BQ86YN6 1023 aaKnown RBP28.49■■■□□ 2.15
SNCB-202ENST00000393693 POTEAQ6S8J7 498 aa28.48■■■□□ 2.15
SNCB-202ENST00000393693 ADAMTS13Q76LX8 1427 aa28.48■■■□□ 2.15
SNCB-202ENST00000393693 NUP155O75694 1391 aa28.48■■■□□ 2.15
SNCB-202ENST00000393693 IQGAP3Q86VI3 1631 aa28.45■■■□□ 2.14
SNCB-202ENST00000393693 C14orf37Q86TY3 774 aa28.43■■■□□ 2.14
SNCB-202ENST00000393693 PHLPP1O60346 1717 aa28.4■■■□□ 2.14
SNCB-202ENST00000393693 NCOA3Q9Y6Q9 1424 aa28.38■■■□□ 2.13
SNCB-202ENST00000393693 JCADQ9P266 1359 aa28.37■■■□□ 2.13
SNCB-202ENST00000393693 AMOTL2Q9Y2J4 779 aa28.36■■■□□ 2.13
SNCB-202ENST00000393693 PIK3R4Q99570 1358 aa28.36■■■□□ 2.13
SNCB-202ENST00000393693 PTPRUQ92729 1446 aa28.35■■■□□ 2.13
SNCB-202ENST00000393693 C19orf44Q9H6X5 657 aa28.35■■■□□ 2.13
SNCB-202ENST00000393693 DIP2AQ14689 1571 aa28.35■■■□□ 2.13
SNCB-202ENST00000393693 CADPS2Q86UW7 1296 aa28.33■■■□□ 2.13
SNCB-202ENST00000393693 COL16A1Q07092 1604 aaPredicted RBP28.32■■■□□ 2.12
SNCB-202ENST00000393693 ATF3P18847 181 aa28.32■■■□□ 2.12
SNCB-202ENST00000393693 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.32■■■□□ 2.12
SNCB-202ENST00000393693 TRPM2O94759 1503 aa28.31■■■□□ 2.12
SNCB-202ENST00000393693 ZNF326Q5BKZ1 582 aaKnown RBP28.28■■■□□ 2.12
SNCB-202ENST00000393693 LRP6O75581 1613 aa28.25■■■□□ 2.11
SNCB-202ENST00000393693 NRXN3Q9Y4C0 1643 aa28.25■■■□□ 2.11
SNCB-202ENST00000393693 BRINP3Q76B58 766 aa28.24■■■□□ 2.11
SNCB-202ENST00000393693 SPHKAPQ2M3C7 1700 aa28.23■■■□□ 2.11
SNCB-202ENST00000393693 SPATA31A6Q5VVP1 1343 aa28.22■■■□□ 2.11
SNCB-202ENST00000393693 AHDC1Q5TGY3 1603 aaPredicted RBP28.22■■■□□ 2.11
SNCB-202ENST00000393693 METP08581 1390 aa28.22■■■□□ 2.11
SNCB-202ENST00000393693 SETBP1Q9Y6X0 1596 aa28.2■■■□□ 2.11
SNCB-202ENST00000393693 MEX3CQ5U5Q3 659 aaKnown RBP28.2■■■□□ 2.1
SNCB-202ENST00000393693 XRN1Q8IZH2 1706 aaKnown RBP28.18■■■□□ 2.1
SNCB-202ENST00000393693 SETD1AO15047 1707 aaKnown RBP28.17■■■□□ 2.1
SNCB-202ENST00000393693 CLTCL1P53675 1640 aa28.15■■■□□ 2.1
SNCB-202ENST00000393693 DCCP43146 1447 aa28.15■■■□□ 2.1
SNCB-202ENST00000393693 NUTM2BA6NNL0 878 aaPredicted RBP28.14■■■□□ 2.1
SNCB-202ENST00000393693 NUTM2EB1AL46 878 aaPredicted RBP28.14■■■□□ 2.1
SNCB-202ENST00000393693 NUTM2AQ8IVF1 878 aaPredicted RBP28.14■■■□□ 2.1
SNCB-202ENST00000393693 MST1RQ04912 1400 aa28.14■■■□□ 2.1
SNCB-202ENST00000393693 SHPRHQ149N8 1683 aa28.13■■■□□ 2.09
SNCB-202ENST00000393693 NAIPQ13075 1403 aa28.13■■■□□ 2.09
SNCB-202ENST00000393693 NEXMIFQ5QGS0 1516 aa28.13■■■□□ 2.09
SNCB-202ENST00000393693 RRBP1Q9P2E9 1410 aaKnown RBP28.12■■■□□ 2.09
SNCB-202ENST00000393693 ASXL1Q8IXJ9 1541 aa28.12■■■□□ 2.09
SNCB-202ENST00000393693 ZNF772Q68DY9 489 aaPredicted RBP28.11■■■□□ 2.09
SNCB-202ENST00000393693 DDX17Q92841 729 aaKnown RBP28.1■■■□□ 2.09
SNCB-202ENST00000393693 TRIM52Q96A61 297 aa28.09■■■□□ 2.09
SNCB-202ENST00000393693 ADGRL3Q9HAR2 1447 aa28.07■■■□□ 2.08
SNCB-202ENST00000393693 SETD5Q9C0A6 1442 aa28.05■■■□□ 2.08
SNCB-202ENST00000393693 LRRC59Q96AG4 307 aaKnown RBP28.02■■■□□ 2.08
SNCB-202ENST00000393693 NHSL1Q5SYE7 1610 aa28.02■■■□□ 2.08
SNCB-202ENST00000393693 KIF1BO60333 1816 aa28.02■■■□□ 2.08
SNCB-202ENST00000393693 NALCNQ8IZF0 1738 aa28.01■■■□□ 2.07
SNCB-202ENST00000393693 AFF2P51816 1311 aa28■■■□□ 2.07
SNCB-202ENST00000393693 RXRBP28702 533 aa28■■■□□ 2.07
SNCB-202ENST00000393693 VGFO15240 615 aaPredicted RBP27.99■■■□□ 2.07
SNCB-202ENST00000393693 UPF1Q92900 1129 aaKnown RBP eCLIP27.98■■■□□ 2.07
SNCB-202ENST00000393693 SLC4A1APQ9BWU0 796 aaKnown RBP27.98■■■□□ 2.07
SNCB-202ENST00000393693 ROBO2Q9HCK4 1378 aa27.98■■■□□ 2.07
SNCB-202ENST00000393693 PNPLA6Q8IY17 1366 aa27.97■■■□□ 2.07
SNCB-202ENST00000393693 C1orf167Q5SNV9 1468 aa27.96■■■□□ 2.07
SNCB-202ENST00000393693 HFM1A2PYH4 1435 aa27.96■■■□□ 2.07
SNCB-202ENST00000393693 C8orf37Q96NL8 207 aa27.94■■■□□ 2.06
SNCB-202ENST00000393693 ORAI2Q96SN7 254 aa27.94■■■□□ 2.06
SNCB-202ENST00000393693 PTCH1Q13635 1447 aa27.93■■■□□ 2.06
SNCB-202ENST00000393693 FOXD1Q16676 465 aa27.93■■■□□ 2.06
SNCB-202ENST00000393693 RPGRIP1LQ68CZ1 1315 aa27.92■■■□□ 2.06
SNCB-202ENST00000393693 ADAMTS2O95450 1211 aa27.88■■■□□ 2.05
SNCB-202ENST00000393693 QTRT2Q9H974 415 aaKnown RBP27.88■■■□□ 2.05
SNCB-202ENST00000393693 CDK12Q9NYV4 1490 aaPredicted RBP27.86■■■□□ 2.05
SNCB-202ENST00000393693 SOS2Q07890 1332 aaPredicted RBP27.86■■■□□ 2.05
SNCB-202ENST00000393693 PRAG1Q86YV5 1406 aa27.84■■■□□ 2.05
SNCB-202ENST00000393693 PPLO60437 1756 aa27.84■■■□□ 2.05
SNCB-202ENST00000393693 NGLY1Q96IV0 654 aa27.83■■■□□ 2.05
SNCB-202ENST00000393693 ADGRF5Q8IZF2 1346 aa27.83■■■□□ 2.05
SNCB-202ENST00000393693 RBM6P78332 1123 aaKnown RBP27.82■■■□□ 2.04
SNCB-202ENST00000393693 LAMC1P11047 1609 aa27.81■■■□□ 2.04
SNCB-202ENST00000393693 RGL3Q3MIN7 710 aa27.81■■■□□ 2.04
SNCB-202ENST00000393693 RGS12O14924 1447 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms