RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 PLA2G2CQ5R387 149 aa5.74□□□□□ -1.49
SNORA40.19-201ENST00000390846 Q6ZNB5 142 aa5.74□□□□□ -1.49
SNORA40.19-201ENST00000390846 PXYLP1Q8TE99 480 aa5.74□□□□□ -1.49
SNORA40.19-201ENST00000390846 PHOX2BQ99453 314 aa5.74□□□□□ -1.49
SNORA40.19-201ENST00000390846 SLF2Q8IX21 1173 aa5.73□□□□□ -1.49
SNORA40.19-201ENST00000390846 NRG2O14511 850 aaPredicted RBP5.72□□□□□ -1.49
SNORA40.19-201ENST00000390846 ACTN4O43707 911 aaKnown RBP5.72□□□□□ -1.49
SNORA40.19-201ENST00000390846 TRAF7Q6Q0C0 670 aa5.72□□□□□ -1.49
SNORA40.19-201ENST00000390846 LIAT1Q6ZQX7 453 aa5.72□□□□□ -1.49
SNORA40.19-201ENST00000390846 PPEF1O14829 653 aaPredicted RBP5.71□□□□□ -1.5
SNORA40.19-201ENST00000390846 DNAJB2P25686 324 aa5.71□□□□□ -1.5
SNORA40.19-201ENST00000390846 RBM26Q5T8P6 1007 aaKnown RBP5.71□□□□□ -1.5
SNORA40.19-201ENST00000390846 TMUB1Q9BVT8 246 aa5.71□□□□□ -1.5
SNORA40.19-201ENST00000390846 RNF40O75150 1001 aa5.7□□□□□ -1.5
SNORA40.19-201ENST00000390846 LAPTM4AQ15012 233 aa5.69□□□□□ -1.5
SNORA40.19-201ENST00000390846 METTL3Q86U44 580 aaKnown RBP5.69□□□□□ -1.5
SNORA40.19-201ENST00000390846 THAP11Q96EK4 314 aa5.69□□□□□ -1.5
SNORA40.19-201ENST00000390846 PCDHB3Q9Y5E6 796 aa5.69□□□□□ -1.5
SNORA40.19-201ENST00000390846 POTECB2RU33 542 aa5.68□□□□□ -1.5
SNORA40.19-201ENST00000390846 GDF9O60383 454 aa5.68□□□□□ -1.5
SNORA40.19-201ENST00000390846 NLRP7Q8WX94 980 aa5.68□□□□□ -1.5
SNORA40.19-201ENST00000390846 KDM2AQ9Y2K7 1162 aa5.68□□□□□ -1.5
SNORA40.19-201ENST00000390846 S1PR4O95977 384 aa5.67□□□□□ -1.5
SNORA40.19-201ENST00000390846 CFHP08603 1231 aa5.67□□□□□ -1.5
SNORA40.19-201ENST00000390846 SPRYD7Q5W111 196 aa5.67□□□□□ -1.5
SNORA40.19-201ENST00000390846 RBM46Q8TBY0 533 aaKnown RBP5.67□□□□□ -1.5
SNORA40.19-201ENST00000390846 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.66□□□□□ -1.5
SNORA40.19-201ENST00000390846 NUTM2FA1L443 756 aa5.66□□□□□ -1.5
SNORA40.19-201ENST00000390846 FCHSD2O94868 740 aa5.66□□□□□ -1.5
SNORA40.19-201ENST00000390846 SCUBE3Q8IX30 993 aa5.66□□□□□ -1.5
SNORA40.19-201ENST00000390846 FAM160A2Q8N612 972 aaPredicted RBP5.66□□□□□ -1.5
SNORA40.19-201ENST00000390846 ANKLE1Q8NAG6 615 aa5.66□□□□□ -1.5
SNORA40.19-201ENST00000390846 PKD2L1Q9P0L9 805 aa5.66□□□□□ -1.5
SNORA40.19-201ENST00000390846 PDZRN3Q9UPQ7 1066 aa5.66□□□□□ -1.5
SNORA40.19-201ENST00000390846 SLC19A1P41440 591 aa5.65□□□□□ -1.5
SNORA40.19-201ENST00000390846 HDGFP51858 240 aaKnown RBP5.65□□□□□ -1.5
SNORA40.19-201ENST00000390846 PRR20EP86478 221 aa5.65□□□□□ -1.5
SNORA40.19-201ENST00000390846 PRR20CP86479 221 aa5.65□□□□□ -1.5
SNORA40.19-201ENST00000390846 PRR20DP86480 221 aa5.65□□□□□ -1.5
SNORA40.19-201ENST00000390846 PRR20BP86481 221 aa5.65□□□□□ -1.5
SNORA40.19-201ENST00000390846 PRR20AP86496 221 aa5.65□□□□□ -1.5
SNORA40.19-201ENST00000390846 MYT1Q01538 1121 aa5.65□□□□□ -1.5
SNORA40.19-201ENST00000390846 PUS10Q3MIT2 529 aaKnown RBP5.65□□□□□ -1.5
SNORA40.19-201ENST00000390846 LCE2AQ5TA79 106 aaPredicted RBP5.65□□□□□ -1.5
SNORA40.19-201ENST00000390846 ZNF598Q86UK7 904 aaKnown RBP5.64□□□□□ -1.51
SNORA40.19-201ENST00000390846 ADH1BP00325 375 aa5.63□□□□□ -1.51
SNORA40.19-201ENST00000390846 HIC1Q14526 733 aa5.63□□□□□ -1.51
SNORA40.19-201ENST00000390846 MORN1Q5T089 497 aa5.63□□□□□ -1.51
SNORA40.19-201ENST00000390846 PLCB2Q00722 1185 aa5.62□□□□□ -1.51
SNORA40.19-201ENST00000390846 NECTIN2Q92692 538 aa5.62□□□□□ -1.51
SNORA40.19-201ENST00000390846 GNPATO15228 680 aa5.61□□□□□ -1.51
SNORA40.19-201ENST00000390846 OATP04181 439 aa5.61□□□□□ -1.51
SNORA40.19-201ENST00000390846 ZNF775Q96BV0 537 aaPredicted RBP5.61□□□□□ -1.51
SNORA40.19-201ENST00000390846 PRR14Q9BWN1 585 aa5.61□□□□□ -1.51
SNORA40.19-201ENST00000390846 GCGRP47871 477 aa5.6□□□□□ -1.51
SNORA40.19-201ENST00000390846 DAXXQ9UER7 740 aaPredicted RBP5.6□□□□□ -1.51
SNORA40.19-201ENST00000390846 SLC27A5Q9Y2P5 690 aa5.6□□□□□ -1.51
SNORA40.19-201ENST00000390846 FUT2Q10981 343 aa5.59□□□□□ -1.51
SNORA40.19-201ENST00000390846 BRICD5Q6PL45 260 aa5.59□□□□□ -1.51
SNORA40.19-201ENST00000390846 P3H3Q8IVL6 736 aa5.59□□□□□ -1.51
SNORA40.19-201ENST00000390846 PRDM9Q9NQV7 894 aa5.59□□□□□ -1.51
SNORA40.19-201ENST00000390846 DACH1Q9UI36 760 aa5.59□□□□□ -1.51
SNORA40.19-201ENST00000390846 KMT5BQ4FZB7 885 aa5.58□□□□□ -1.52
SNORA40.19-201ENST00000390846 LCE2CQ5TA81 110 aa5.58□□□□□ -1.52
SNORA40.19-201ENST00000390846 ZNF697Q5TEC3 545 aa5.58□□□□□ -1.52
SNORA40.19-201ENST00000390846 SLC6A16Q9GZN6 736 aa5.58□□□□□ -1.52
SNORA40.19-201ENST00000390846 TOR4AQ9NXH8 423 aa5.58□□□□□ -1.52
SNORA40.19-201ENST00000390846 TNFRSF10AO00220 468 aa5.57□□□□□ -1.52
SNORA40.19-201ENST00000390846 NR1I2O75469 434 aa5.57□□□□□ -1.52
SNORA40.19-201ENST00000390846 DGAT1O75907 488 aa5.57□□□□□ -1.52
SNORA40.19-201ENST00000390846 GGCXP38435 758 aa5.57□□□□□ -1.52
SNORA40.19-201ENST00000390846 ZNF787Q6DD87 383 aa5.57□□□□□ -1.52
SNORA40.19-201ENST00000390846 RNF19BQ6ZMZ0 732 aa5.57□□□□□ -1.52
SNORA40.19-201ENST00000390846 SPSB2Q99619 263 aa5.57□□□□□ -1.52
SNORA40.19-201ENST00000390846 AAASQ9NRG9 546 aa5.57□□□□□ -1.52
SNORA40.19-201ENST00000390846 ST8SIA5O15466 376 aa5.56□□□□□ -1.52
SNORA40.19-201ENST00000390846 HLA-CQ95604 372 aa5.56□□□□□ -1.52
SNORA40.19-201ENST00000390846 SALL2Q9Y467 1007 aaPredicted RBP5.56□□□□□ -1.52
SNORA40.19-201ENST00000390846 AVPP01185 164 aa5.55□□□□□ -1.52
SNORA40.19-201ENST00000390846 CD46P15529 392 aa5.55□□□□□ -1.52
SNORA40.19-201ENST00000390846 ATP6V1AP38606 617 aa5.54□□□□□ -1.52
SNORA40.19-201ENST00000390846 CRIPAKQ8N1N5 446 aa5.54□□□□□ -1.52
SNORA40.19-201ENST00000390846 REPIN1Q9BWE0 567 aaKnown RBP5.54□□□□□ -1.52
SNORA40.19-201ENST00000390846 DDX11L8A8MPP1 907 aa5.53□□□□□ -1.52
SNORA40.19-201ENST00000390846 RPIAP49247 311 aa5.53□□□□□ -1.52
SNORA40.19-201ENST00000390846 FCF1Q9Y324 198 aaKnown RBP5.53□□□□□ -1.52
SNORA40.19-201ENST00000390846 MMP16P51512 607 aa5.52□□□□□ -1.53
SNORA40.19-201ENST00000390846 IRF6O14896 467 aa5.51□□□□□ -1.53
SNORA40.19-201ENST00000390846 SLC4A3P48751 1232 aa5.51□□□□□ -1.53
SNORA40.19-201ENST00000390846 MSS51Q4VC12 460 aa5.51□□□□□ -1.53
SNORA40.19-201ENST00000390846 RDH13Q8NBN7 331 aa5.5□□□□□ -1.53
SNORA40.19-201ENST00000390846 FAM187AA6NFU0 413 aa5.49□□□□□ -1.53
SNORA40.19-201ENST00000390846 DXOO77932 396 aaKnown RBP5.49□□□□□ -1.53
SNORA40.19-201ENST00000390846 SMPD1P17405 629 aa5.49□□□□□ -1.53
SNORA40.19-201ENST00000390846 SKOR1P84550 965 aa5.49□□□□□ -1.53
SNORA40.19-201ENST00000390846 MAP2K5Q13163 448 aa5.49□□□□□ -1.53
SNORA40.19-201ENST00000390846 PKDCCQ504Y2 493 aa5.49□□□□□ -1.53
SNORA40.19-201ENST00000390846 GPIHBP1Q8IV16 184 aa5.49□□□□□ -1.53
SNORA40.19-201ENST00000390846 FMNL1O95466 1100 aaPredicted RBP5.48□□□□□ -1.53
SNORA40.19-201ENST00000390846 SMCPP49901 116 aaPredicted RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms