RNA–Protein interactions for RNA: ENST00000381032.5

VCX3B-202, Transcript of variable charge X-linked 3B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene VCX3B, Length 1,171 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-202ENST00000381032 PHF23Q9BUL5 403 aaPredicted RBP23.94■■□□□ 1.42
VCX3B-202ENST00000381032 RPRD2Q5VT52 1461 aaKnown RBP23.94■■□□□ 1.42
VCX3B-202ENST00000381032 CHD2O14647 1828 aaKnown RBP23.93■■□□□ 1.42
VCX3B-202ENST00000381032 ZFYVE9O95405 1425 aa23.92■■□□□ 1.42
VCX3B-202ENST00000381032 KCNA6P17658 529 aa23.9■■□□□ 1.42
VCX3B-202ENST00000381032 NKTRP30414 1462 aaKnown RBP23.89■■□□□ 1.42
VCX3B-202ENST00000381032 SLC52A1Q9NWF4 448 aa23.88■■□□□ 1.41
VCX3B-202ENST00000381032 FAM135BQ49AJ0 1406 aa23.87■■□□□ 1.41
VCX3B-202ENST00000381032 IQGAP3Q86VI3 1631 aa23.87■■□□□ 1.41
VCX3B-202ENST00000381032 RIMS2Q9UQ26 1411 aa23.86■■□□□ 1.41
VCX3B-202ENST00000381032 PROSER2Q86WR7 435 aaPredicted RBP23.85■■□□□ 1.41
VCX3B-202ENST00000381032 RGS17Q9UGC6 210 aaPredicted RBP23.84■■□□□ 1.41
VCX3B-202ENST00000381032 PLEKHG1Q9ULL1 1385 aa23.83■■□□□ 1.41
VCX3B-202ENST00000381032 BCANQ96GW7 911 aa23.82■■□□□ 1.4
VCX3B-202ENST00000381032 PHLPP1O60346 1717 aa23.81■■□□□ 1.4
VCX3B-202ENST00000381032 NUTM2DQ5VT03 806 aaPredicted RBP23.78■■□□□ 1.4
VCX3B-202ENST00000381032 ROCK1Q13464 1354 aa23.78■■□□□ 1.4
VCX3B-202ENST00000381032 PPP1R15AO75807 674 aaPredicted RBP23.77■■□□□ 1.4
VCX3B-202ENST00000381032 MSH6P52701 1360 aa23.77■■□□□ 1.4
VCX3B-202ENST00000381032 ADAMTS13Q76LX8 1427 aa23.76■■□□□ 1.39
VCX3B-202ENST00000381032 CHGAP10645 457 aaKnown RBP23.76■■□□□ 1.39
VCX3B-202ENST00000381032 SPHKAPQ2M3C7 1700 aa23.74■■□□□ 1.39
VCX3B-202ENST00000381032 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.73■■□□□ 1.39
VCX3B-202ENST00000381032 ITGAEP38570 1179 aa23.73■■□□□ 1.39
VCX3B-202ENST00000381032 PPARGC1BQ86YN6 1023 aaKnown RBP23.73■■□□□ 1.39
VCX3B-202ENST00000381032 DIP2AQ14689 1571 aa23.73■■□□□ 1.39
VCX3B-202ENST00000381032 COL16A1Q07092 1604 aaPredicted RBP23.73■■□□□ 1.39
VCX3B-202ENST00000381032 NRXN3Q9Y4C0 1643 aa23.71■■□□□ 1.39
VCX3B-202ENST00000381032 NUP155O75694 1391 aa23.7■■□□□ 1.38
VCX3B-202ENST00000381032 SLAIN2Q9P270 581 aa23.69■■□□□ 1.38
VCX3B-202ENST00000381032 TBX22Q9Y458 520 aa23.69■■□□□ 1.38
VCX3B-202ENST00000381032 SETD1AO15047 1707 aaKnown RBP23.69■■□□□ 1.38
VCX3B-202ENST00000381032 POTEAQ6S8J7 498 aa23.68■■□□□ 1.38
VCX3B-202ENST00000381032 PTPRUQ92729 1446 aa23.67■■□□□ 1.38
VCX3B-202ENST00000381032 TRPM2O94759 1503 aa23.66■■□□□ 1.38
VCX3B-202ENST00000381032 HDGFP51858 240 aaKnown RBP23.66■■□□□ 1.38
VCX3B-202ENST00000381032 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.66■■□□□ 1.38
VCX3B-202ENST00000381032 XRN1Q8IZH2 1706 aaKnown RBP23.65■■□□□ 1.38
VCX3B-202ENST00000381032 CLTCL1P53675 1640 aa23.62■■□□□ 1.37
VCX3B-202ENST00000381032 NCOA3Q9Y6Q9 1424 aa23.61■■□□□ 1.37
VCX3B-202ENST00000381032 C14orf37Q86TY3 774 aa23.61■■□□□ 1.37
VCX3B-202ENST00000381032 LRP6O75581 1613 aa23.61■■□□□ 1.37
VCX3B-202ENST00000381032 AHDC1Q5TGY3 1603 aaPredicted RBP23.61■■□□□ 1.37
VCX3B-202ENST00000381032 PIK3R4Q99570 1358 aa23.61■■□□□ 1.37
VCX3B-202ENST00000381032 JCADQ9P266 1359 aa23.61■■□□□ 1.37
VCX3B-202ENST00000381032 SETBP1Q9Y6X0 1596 aa23.61■■□□□ 1.37
VCX3B-202ENST00000381032 SHPRHQ149N8 1683 aa23.59■■□□□ 1.37
VCX3B-202ENST00000381032 KIF1BO60333 1816 aa23.56■■□□□ 1.36
VCX3B-202ENST00000381032 NEXMIFQ5QGS0 1516 aa23.56■■□□□ 1.36
VCX3B-202ENST00000381032 AMOTL2Q9Y2J4 779 aa23.56■■□□□ 1.36
VCX3B-202ENST00000381032 C19orf44Q9H6X5 657 aa23.54■■□□□ 1.36
VCX3B-202ENST00000381032 NALCNQ8IZF0 1738 aa23.53■■□□□ 1.36
VCX3B-202ENST00000381032 CADPS2Q86UW7 1296 aa23.52■■□□□ 1.36
VCX3B-202ENST00000381032 METP08581 1390 aa23.52■■□□□ 1.36
VCX3B-202ENST00000381032 ATF3P18847 181 aa23.51■■□□□ 1.35
VCX3B-202ENST00000381032 NHSL1Q5SYE7 1610 aa23.51■■□□□ 1.35
VCX3B-202ENST00000381032 RRBP1Q9P2E9 1410 aaKnown RBP23.5■■□□□ 1.35
VCX3B-202ENST00000381032 ASXL1Q8IXJ9 1541 aa23.5■■□□□ 1.35
VCX3B-202ENST00000381032 ZNF326Q5BKZ1 582 aaKnown RBP23.5■■□□□ 1.35
VCX3B-202ENST00000381032 NAIPQ13075 1403 aa23.5■■□□□ 1.35
VCX3B-202ENST00000381032 BRINP3Q76B58 766 aa23.49■■□□□ 1.35
VCX3B-202ENST00000381032 DCCP43146 1447 aa23.48■■□□□ 1.35
VCX3B-202ENST00000381032 MST1RQ04912 1400 aa23.48■■□□□ 1.35
VCX3B-202ENST00000381032 SPATA31A6Q5VVP1 1343 aa23.45■■□□□ 1.34
VCX3B-202ENST00000381032 ADGRL3Q9HAR2 1447 aa23.42■■□□□ 1.34
VCX3B-202ENST00000381032 PPLO60437 1756 aa23.42■■□□□ 1.34
VCX3B-202ENST00000381032 MEX3CQ5U5Q3 659 aaKnown RBP23.41■■□□□ 1.34
VCX3B-202ENST00000381032 DDX17Q92841 729 aaKnown RBP23.39■■□□□ 1.33
VCX3B-202ENST00000381032 SETD5Q9C0A6 1442 aa23.38■■□□□ 1.33
VCX3B-202ENST00000381032 NUTM2BA6NNL0 878 aaPredicted RBP23.37■■□□□ 1.33
VCX3B-202ENST00000381032 NUTM2EB1AL46 878 aaPredicted RBP23.37■■□□□ 1.33
VCX3B-202ENST00000381032 NUTM2AQ8IVF1 878 aaPredicted RBP23.37■■□□□ 1.33
VCX3B-202ENST00000381032 HFM1A2PYH4 1435 aa23.35■■□□□ 1.33
VCX3B-202ENST00000381032 TRIM52Q96A61 297 aa23.34■■□□□ 1.33
VCX3B-202ENST00000381032 ROBO2Q9HCK4 1378 aa23.33■■□□□ 1.33
VCX3B-202ENST00000381032 LAMC1P11047 1609 aa23.33■■□□□ 1.32
VCX3B-202ENST00000381032 PTCH1Q13635 1447 aa23.33■■□□□ 1.32
VCX3B-202ENST00000381032 ZNF772Q68DY9 489 aaPredicted RBP23.32■■□□□ 1.32
VCX3B-202ENST00000381032 C1orf167Q5SNV9 1468 aa23.31■■□□□ 1.32
VCX3B-202ENST00000381032 PNPLA6Q8IY17 1366 aa23.3■■□□□ 1.32
VCX3B-202ENST00000381032 AFF2P51816 1311 aa23.29■■□□□ 1.32
VCX3B-202ENST00000381032 IFT172Q9UG01 1749 aa23.28■■□□□ 1.32
VCX3B-202ENST00000381032 PRAG1Q86YV5 1406 aa23.27■■□□□ 1.32
VCX3B-202ENST00000381032 FOXD1Q16676 465 aa23.27■■□□□ 1.32
VCX3B-202ENST00000381032 SLC4A1APQ9BWU0 796 aaKnown RBP23.27■■□□□ 1.32
VCX3B-202ENST00000381032 LRRC59Q96AG4 307 aaKnown RBP23.25■■□□□ 1.31
VCX3B-202ENST00000381032 UPF1Q92900 1129 aaKnown RBP eCLIP23.24■■□□□ 1.31
VCX3B-202ENST00000381032 VGFO15240 615 aaPredicted RBP23.23■■□□□ 1.31
VCX3B-202ENST00000381032 RXRBP28702 533 aa23.23■■□□□ 1.31
VCX3B-202ENST00000381032 C8orf37Q96NL8 207 aa23.23■■□□□ 1.31
VCX3B-202ENST00000381032 ORAI2Q96SN7 254 aa23.23■■□□□ 1.31
VCX3B-202ENST00000381032 CDK12Q9NYV4 1490 aaPredicted RBP23.22■■□□□ 1.31
VCX3B-202ENST00000381032 RGS12O14924 1447 aa23.21■■□□□ 1.31
VCX3B-202ENST00000381032 CDC42BPGQ6DT37 1551 aa23.2■■□□□ 1.3
VCX3B-202ENST00000381032 RPGRIP1LQ68CZ1 1315 aa23.2■■□□□ 1.3
VCX3B-202ENST00000381032 SOS2Q07890 1332 aaPredicted RBP23.18■■□□□ 1.3
VCX3B-202ENST00000381032 COL22A1Q8NFW1 1626 aaPredicted RBP23.18■■□□□ 1.3
VCX3B-202ENST00000381032 KNDC1Q76NI1 1749 aa23.17■■□□□ 1.3
VCX3B-202ENST00000381032 ADGRF5Q8IZF2 1346 aa23.17■■□□□ 1.3
VCX3B-202ENST00000381032 ADAMTS2O95450 1211 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms