RNA–Protein interactions for RNA: ENST00000380918.7

SREK1-203, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,433 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-203ENST00000380918 KCNH8Q96L42 1107 aa8.37□□□□□ -1.07
SREK1-203ENST00000380918 C8orf37Q96NL8 207 aa8.37□□□□□ -1.07
SREK1-203ENST00000380918 PCDHB8Q9UN66 801 aa8.37□□□□□ -1.07
SREK1-203ENST00000380918 PCDHB13Q9Y5F0 798 aa8.37□□□□□ -1.07
SREK1-203ENST00000380918 TPD52L2O43399 206 aaKnown RBP8.36□□□□□ -1.07
SREK1-203ENST00000380918 MNX1P50219 401 aaPredicted RBP8.36□□□□□ -1.07
SREK1-203ENST00000380918 ZC3H6P61129 1189 aaKnown RBP8.36□□□□□ -1.07
SREK1-203ENST00000380918 EMILIN3Q9NT22 766 aa8.35□□□□□ -1.07
SREK1-203ENST00000380918 CAPN15O75808 1086 aa8.35□□□□□ -1.07
SREK1-203ENST00000380918 RFC5P40937 340 aa8.35□□□□□ -1.07
SREK1-203ENST00000380918 HDGFL1Q5TGJ6 251 aa8.35□□□□□ -1.07
SREK1-203ENST00000380918 CEP162Q5TB80 1403 aa8.35□□□□□ -1.07
SREK1-203ENST00000380918 GNPATO15228 680 aa8.34□□□□□ -1.07
SREK1-203ENST00000380918 RECKO95980 971 aa8.34□□□□□ -1.07
SREK1-203ENST00000380918 FAM50AQ14320 339 aaKnown RBP8.34□□□□□ -1.07
SREK1-203ENST00000380918 RBM46Q8TBY0 533 aaKnown RBP8.34□□□□□ -1.07
SREK1-203ENST00000380918 SGSM3Q96HU1 749 aa8.34□□□□□ -1.07
SREK1-203ENST00000380918 TBC1D2Q9BYX2 928 aa8.34□□□□□ -1.07
SREK1-203ENST00000380918 MAP4K4O95819 1239 aaPredicted RBP8.33□□□□□ -1.08
SREK1-203ENST00000380918 FOXD4L6Q3SYB3 417 aaPredicted RBP8.33□□□□□ -1.08
SREK1-203ENST00000380918 FOXD4L3Q6VB84 417 aaPredicted RBP8.33□□□□□ -1.08
SREK1-203ENST00000380918 EVI5LQ96CN4 794 aa8.33□□□□□ -1.08
SREK1-203ENST00000380918 RSF1Q96T23 1441 aaPredicted RBP8.33□□□□□ -1.08
SREK1-203ENST00000380918 GRXCR2A6NFK2 248 aa8.33□□□□□ -1.08
SREK1-203ENST00000380918 PDE4AP27815 886 aa8.33□□□□□ -1.08
SREK1-203ENST00000380918 C9orf131Q5VYM1 1079 aa8.33□□□□□ -1.08
SREK1-203ENST00000380918 EFCAB3Q8N7B9 438 aa8.33□□□□□ -1.08
SREK1-203ENST00000380918 MYH16Q9H6N6 1097 aa8.33□□□□□ -1.08
SREK1-203ENST00000380918 NLRP7Q8WX94 980 aa8.32□□□□□ -1.08
SREK1-203ENST00000380918 PHOX2BQ99453 314 aa8.32□□□□□ -1.08
SREK1-203ENST00000380918 GNEQ9Y223 722 aaKnown RBP8.32□□□□□ -1.08
SREK1-203ENST00000380918 FARP1Q9Y4F1 1045 aaPredicted RBP8.32□□□□□ -1.08
SREK1-203ENST00000380918 SCNN1AP37088 669 aa8.31□□□□□ -1.08
SREK1-203ENST00000380918 SBNO2Q9Y2G9 1366 aa8.31□□□□□ -1.08
SREK1-203ENST00000380918 PHLDB3Q6NSJ2 640 aa8.31□□□□□ -1.08
SREK1-203ENST00000380918 BEGAINQ9BUH8 593 aa8.31□□□□□ -1.08
SREK1-203ENST00000380918 ZBTB12Q9Y330 459 aaPredicted RBP8.31□□□□□ -1.08
SREK1-203ENST00000380918 PPP1R12CQ9BZL4 782 aa8.3□□□□□ -1.08
SREK1-203ENST00000380918 LMOD1P29536 600 aaPredicted RBP8.3□□□□□ -1.08
SREK1-203ENST00000380918 PDIA6Q15084 440 aa8.3□□□□□ -1.08
SREK1-203ENST00000380918 MYSM1Q5VVJ2 828 aa8.3□□□□□ -1.08
SREK1-203ENST00000380918 PARNO95453 639 aaKnown RBP8.29□□□□□ -1.08
SREK1-203ENST00000380918 APBB1IPQ7Z5R6 666 aaPredicted RBP8.29□□□□□ -1.08
SREK1-203ENST00000380918 PALM3A6NDB9 673 aaPredicted RBP8.29□□□□□ -1.08
SREK1-203ENST00000380918 ANAPC15P60006 121 aa8.28□□□□□ -1.08
SREK1-203ENST00000380918 MDM2Q00987 491 aaPredicted RBP8.28□□□□□ -1.08
SREK1-203ENST00000380918 NAP1L5Q96NT1 182 aaPredicted RBP8.28□□□□□ -1.08
SREK1-203ENST00000380918 PDAP1Q13442 181 aaKnown RBP8.28□□□□□ -1.08
SREK1-203ENST00000380918 TSNAXIP1Q2TAA8 658 aa8.27□□□□□ -1.09
SREK1-203ENST00000380918 GORABQ5T7V8 394 aa8.27□□□□□ -1.09
SREK1-203ENST00000380918 UCN2Q96RP3 112 aa8.27□□□□□ -1.09
SREK1-203ENST00000380918 LNPKQ9C0E8 428 aa8.27□□□□□ -1.09
SREK1-203ENST00000380918 SERPINB4P48594 390 aa8.27□□□□□ -1.09
SREK1-203ENST00000380918 C7P10643 843 aa8.26□□□□□ -1.09
SREK1-203ENST00000380918 NPAS4Q8IUM7 802 aa8.26□□□□□ -1.09
SREK1-203ENST00000380918 LARGE2Q8N3Y3 721 aa8.25□□□□□ -1.09
SREK1-203ENST00000380918 LAS1LQ9Y4W2 734 aaKnown RBP8.25□□□□□ -1.09
SREK1-203ENST00000380918 ANKRD33BA6NCL7 494 aa8.25□□□□□ -1.09
SREK1-203ENST00000380918 SSTR3P32745 418 aaPredicted RBP8.25□□□□□ -1.09
SREK1-203ENST00000380918 MS4A4AQ96JQ5 239 aa8.25□□□□□ -1.09
SREK1-203ENST00000380918 STK32AQ8WU08 396 aa8.24□□□□□ -1.09
SREK1-203ENST00000380918 PLCD4Q9BRC7 762 aa8.24□□□□□ -1.09
SREK1-203ENST00000380918 PRIM1P49642 420 aaKnown RBP8.24□□□□□ -1.09
SREK1-203ENST00000380918 NLGN1Q8N2Q7 840 aa8.24□□□□□ -1.09
SREK1-203ENST00000380918 TMUB1Q9BVT8 246 aa8.24□□□□□ -1.09
SREK1-203ENST00000380918 GABBR1Q9UBS5 961 aa8.24□□□□□ -1.09
SREK1-203ENST00000380918 NOP58Q9Y2X3 529 aaKnown RBP8.24□□□□□ -1.09
SREK1-203ENST00000380918 HIC1Q14526 733 aa8.23□□□□□ -1.09
SREK1-203ENST00000380918 FAM9BQ8IZU0 186 aa8.23□□□□□ -1.09
SREK1-203ENST00000380918 CNPY4Q8N129 248 aa8.23□□□□□ -1.09
SREK1-203ENST00000380918 DHX38Q92620 1227 aaKnown RBP8.23□□□□□ -1.09
SREK1-203ENST00000380918 CABP2Q9NPB3 220 aa8.23□□□□□ -1.09
SREK1-203ENST00000380918 CLK2P49760 499 aaKnown RBP8.23□□□□□ -1.09
SREK1-203ENST00000380918 SF3A1Q15459 793 aaKnown RBP8.23□□□□□ -1.09
SREK1-203ENST00000380918 PIF1Q9H611 641 aa8.23□□□□□ -1.09
SREK1-203ENST00000380918 TFIP11Q9UBB9 837 aaKnown RBP8.23□□□□□ -1.09
SREK1-203ENST00000380918 LIMD1Q9UGP4 676 aa8.23□□□□□ -1.09
SREK1-203ENST00000380918 DHX57Q6P158 1386 aaKnown RBP8.22□□□□□ -1.09
SREK1-203ENST00000380918 PSEN1P49768 467 aa8.22□□□□□ -1.09
SREK1-203ENST00000380918 PAK3O75914 559 aaPredicted RBP8.22□□□□□ -1.09
SREK1-203ENST00000380918 ERCC5P28715 1186 aaPredicted RBP8.22□□□□□ -1.09
SREK1-203ENST00000380918 HSP90AB4PQ58FF6 505 aa8.22□□□□□ -1.09
SREK1-203ENST00000380918 PPP1R15BQ5SWA1 713 aa8.22□□□□□ -1.09
SREK1-203ENST00000380918 TRIM52Q96A61 297 aa8.22□□□□□ -1.09
SREK1-203ENST00000380918 SPACA7Q96KW9 195 aa8.22□□□□□ -1.09
SREK1-203ENST00000380918 CREBZFQ9NS37 354 aa8.22□□□□□ -1.09
SREK1-203ENST00000380918 TMTC2Q8N394 836 aa8.21□□□□□ -1.09
SREK1-203ENST00000380918 SLAIN2Q9P270 581 aa8.21□□□□□ -1.09
SREK1-203ENST00000380918 IQSEC3Q9UPP2 1182 aaPredicted RBP8.21□□□□□ -1.09
SREK1-203ENST00000380918 TNIKQ9UKE5 1360 aa8.21□□□□□ -1.1
SREK1-203ENST00000380918 OSBPP22059 807 aa8.21□□□□□ -1.1
SREK1-203ENST00000380918 NLRP6P59044 892 aa8.21□□□□□ -1.1
SREK1-203ENST00000380918 PSME1Q06323 249 aa8.21□□□□□ -1.1
SREK1-203ENST00000380918 VAC14Q08AM6 782 aa8.21□□□□□ -1.1
SREK1-203ENST00000380918 ZNF326Q5BKZ1 582 aaKnown RBP8.21□□□□□ -1.1
SREK1-203ENST00000380918 SPTY2D1Q68D10 685 aaPredicted RBP8.21□□□□□ -1.1
SREK1-203ENST00000380918 NACADO15069 1562 aa8.21□□□□□ -1.1
SREK1-203ENST00000380918 GPR37L1O60883 481 aa8.2□□□□□ -1.1
SREK1-203ENST00000380918 MARSP56192 900 aaKnown RBP8.2□□□□□ -1.1
SREK1-203ENST00000380918 TMEM164Q5U3C3 297 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms