RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 ZFYVE9O95405 1425 aa25.89■■□□□ 1.74
SMN2-201ENST00000380741 SENP3Q9H4L4 574 aaPredicted RBP25.89■■□□□ 1.74
SMN2-201ENST00000380741 KCNA6P17658 529 aa25.88■■□□□ 1.73
SMN2-201ENST00000380741 NWD1Q149M9 1564 aa25.87■■□□□ 1.73
SMN2-201ENST00000380741 TMEM94Q12767 1356 aa25.87■■□□□ 1.73
SMN2-201ENST00000380741 ITGAEP38570 1179 aa25.87■■□□□ 1.73
SMN2-201ENST00000380741 RIMS2Q9UQ26 1411 aa25.86■■□□□ 1.73
SMN2-201ENST00000380741 BCANQ96GW7 911 aa25.84■■□□□ 1.73
SMN2-201ENST00000380741 NKTRP30414 1462 aaKnown RBP25.84■■□□□ 1.73
SMN2-201ENST00000380741 PLEKHG1Q9ULL1 1385 aa25.83■■□□□ 1.73
SMN2-201ENST00000380741 NUP155O75694 1391 aa25.82■■□□□ 1.72
SMN2-201ENST00000380741 PROSER2Q86WR7 435 aaPredicted RBP25.81■■□□□ 1.72
SMN2-201ENST00000380741 CHD2O14647 1828 aaKnown RBP25.8■■□□□ 1.72
SMN2-201ENST00000380741 PPP1R15AO75807 674 aaPredicted RBP25.8■■□□□ 1.72
SMN2-201ENST00000380741 RBM33Q96EV2 1170 aaKnown RBP25.8■■□□□ 1.72
SMN2-201ENST00000380741 CHGAP10645 457 aaKnown RBP25.79■■□□□ 1.72
SMN2-201ENST00000380741 HDGFP51858 240 aaKnown RBP25.78■■□□□ 1.72
SMN2-201ENST00000380741 FAM135BQ49AJ0 1406 aa25.77■■□□□ 1.72
SMN2-201ENST00000380741 ROBO1Q9Y6N7 1651 aa25.75■■□□□ 1.71
SMN2-201ENST00000380741 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.74■■□□□ 1.71
SMN2-201ENST00000380741 NUTM2DQ5VT03 806 aaPredicted RBP25.73■■□□□ 1.71
SMN2-201ENST00000380741 PHF23Q9BUL5 403 aaPredicted RBP25.73■■□□□ 1.71
SMN2-201ENST00000380741 SPHKAPQ2M3C7 1700 aa25.72■■□□□ 1.71
SMN2-201ENST00000380741 ADAMTS13Q76LX8 1427 aa25.71■■□□□ 1.71
SMN2-201ENST00000380741 RRBP1Q9P2E9 1410 aaKnown RBP25.71■■□□□ 1.71
SMN2-201ENST00000380741 TBX22Q9Y458 520 aa25.71■■□□□ 1.71
SMN2-201ENST00000380741 MSH6P52701 1360 aa25.7■■□□□ 1.71
SMN2-201ENST00000380741 DIP2AQ14689 1571 aa25.7■■□□□ 1.71
SMN2-201ENST00000380741 PIK3R4Q99570 1358 aa25.63■■□□□ 1.69
SMN2-201ENST00000380741 TRPM2O94759 1503 aa25.63■■□□□ 1.69
SMN2-201ENST00000380741 NAIPQ13075 1403 aa25.63■■□□□ 1.69
SMN2-201ENST00000380741 SLAIN2Q9P270 581 aa25.61■■□□□ 1.69
SMN2-201ENST00000380741 NRXN3Q9Y4C0 1643 aa25.61■■□□□ 1.69
SMN2-201ENST00000380741 NCOA3Q9Y6Q9 1424 aa25.61■■□□□ 1.69
SMN2-201ENST00000380741 CLTCL1P53675 1640 aa25.59■■□□□ 1.69
SMN2-201ENST00000380741 PHLPP1O60346 1717 aa25.59■■□□□ 1.69
SMN2-201ENST00000380741 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.58■■□□□ 1.69
SMN2-201ENST00000380741 SETBP1Q9Y6X0 1596 aa25.57■■□□□ 1.68
SMN2-201ENST00000380741 PTPRUQ92729 1446 aa25.57■■□□□ 1.68
SMN2-201ENST00000380741 C14orf37Q86TY3 774 aa25.57■■□□□ 1.68
SMN2-201ENST00000380741 RGS17Q9UGC6 210 aaPredicted RBP25.56■■□□□ 1.68
SMN2-201ENST00000380741 ZNF326Q5BKZ1 582 aaKnown RBP25.55■■□□□ 1.68
SMN2-201ENST00000380741 AMOTL2Q9Y2J4 779 aa25.54■■□□□ 1.68
SMN2-201ENST00000380741 XRN1Q8IZH2 1706 aaKnown RBP25.54■■□□□ 1.68
SMN2-201ENST00000380741 KIF1BO60333 1816 aa25.53■■□□□ 1.68
SMN2-201ENST00000380741 NEXMIFQ5QGS0 1516 aa25.53■■□□□ 1.68
SMN2-201ENST00000380741 HFM1A2PYH4 1435 aa25.52■■□□□ 1.68
SMN2-201ENST00000380741 COL16A1Q07092 1604 aaPredicted RBP25.52■■□□□ 1.68
SMN2-201ENST00000380741 C19orf44Q9H6X5 657 aa25.51■■□□□ 1.67
SMN2-201ENST00000380741 CADPS2Q86UW7 1296 aa25.5■■□□□ 1.67
SMN2-201ENST00000380741 ATF3P18847 181 aa25.49■■□□□ 1.67
SMN2-201ENST00000380741 METP08581 1390 aa25.47■■□□□ 1.67
SMN2-201ENST00000380741 JCADQ9P266 1359 aa25.47■■□□□ 1.67
SMN2-201ENST00000380741 TRIM52Q96A61 297 aa25.46■■□□□ 1.67
SMN2-201ENST00000380741 AHDC1Q5TGY3 1603 aaPredicted RBP25.45■■□□□ 1.66
SMN2-201ENST00000380741 DCCP43146 1447 aa25.43■■□□□ 1.66
SMN2-201ENST00000380741 POTEAQ6S8J7 498 aa25.41■■□□□ 1.66
SMN2-201ENST00000380741 SLC4A1APQ9BWU0 796 aaKnown RBP25.4■■□□□ 1.66
SMN2-201ENST00000380741 SETD1AO15047 1707 aaKnown RBP25.39■■□□□ 1.65
SMN2-201ENST00000380741 BRINP3Q76B58 766 aa25.38■■□□□ 1.65
SMN2-201ENST00000380741 SHPRHQ149N8 1683 aa25.38■■□□□ 1.65
SMN2-201ENST00000380741 NALCNQ8IZF0 1738 aa25.37■■□□□ 1.65
SMN2-201ENST00000380741 MST1RQ04912 1400 aa25.37■■□□□ 1.65
SMN2-201ENST00000380741 LRP6O75581 1613 aa25.36■■□□□ 1.65
SMN2-201ENST00000380741 ASXL1Q8IXJ9 1541 aa25.36■■□□□ 1.65
SMN2-201ENST00000380741 ADGRL3Q9HAR2 1447 aa25.36■■□□□ 1.65
SMN2-201ENST00000380741 PPLO60437 1756 aa25.35■■□□□ 1.65
SMN2-201ENST00000380741 SPATA31A6Q5VVP1 1343 aa25.34■■□□□ 1.65
SMN2-201ENST00000380741 VGFO15240 615 aaPredicted RBP25.33■■□□□ 1.65
SMN2-201ENST00000380741 NHSL1Q5SYE7 1610 aa25.33■■□□□ 1.65
SMN2-201ENST00000380741 RPGRIP1LQ68CZ1 1315 aa25.31■■□□□ 1.64
SMN2-201ENST00000380741 PTCH1Q13635 1447 aa25.3■■□□□ 1.64
SMN2-201ENST00000380741 FOXD1Q16676 465 aa25.3■■□□□ 1.64
SMN2-201ENST00000380741 ROBO2Q9HCK4 1378 aa25.27■■□□□ 1.64
SMN2-201ENST00000380741 MEX3CQ5U5Q3 659 aaKnown RBP25.26■■□□□ 1.63
SMN2-201ENST00000380741 SETD5Q9C0A6 1442 aa25.26■■□□□ 1.63
SMN2-201ENST00000380741 PRAG1Q86YV5 1406 aa25.25■■□□□ 1.63
SMN2-201ENST00000380741 CCDC144AA2RUR9 1427 aa25.24■■□□□ 1.63
SMN2-201ENST00000380741 C1orf167Q5SNV9 1468 aa25.21■■□□□ 1.63
SMN2-201ENST00000380741 IFT172Q9UG01 1749 aa25.21■■□□□ 1.63
SMN2-201ENST00000380741 DDX17Q92841 729 aaKnown RBP25.21■■□□□ 1.63
SMN2-201ENST00000380741 MPHOSPH9Q99550 1183 aa25.21■■□□□ 1.63
SMN2-201ENST00000380741 SPATA31E1Q6ZUB1 1445 aa25.2■■□□□ 1.63
SMN2-201ENST00000380741 NUTM2BA6NNL0 878 aaPredicted RBP25.19■■□□□ 1.62
SMN2-201ENST00000380741 NUTM2EB1AL46 878 aaPredicted RBP25.19■■□□□ 1.62
SMN2-201ENST00000380741 NUTM2AQ8IVF1 878 aaPredicted RBP25.19■■□□□ 1.62
SMN2-201ENST00000380741 ZNF772Q68DY9 489 aaPredicted RBP25.18■■□□□ 1.62
SMN2-201ENST00000380741 LRRC59Q96AG4 307 aaKnown RBP25.18■■□□□ 1.62
SMN2-201ENST00000380741 ADGRF5Q8IZF2 1346 aa25.17■■□□□ 1.62
SMN2-201ENST00000380741 LAMC1P11047 1609 aa25.17■■□□□ 1.62
SMN2-201ENST00000380741 RGL3Q3MIN7 710 aa25.17■■□□□ 1.62
SMN2-201ENST00000380741 PNPLA6Q8IY17 1366 aa25.14■■□□□ 1.61
SMN2-201ENST00000380741 ORAI2Q96SN7 254 aa25.13■■□□□ 1.61
SMN2-201ENST00000380741 ANKRD30BQ9BXX2 1392 aa25.13■■□□□ 1.61
SMN2-201ENST00000380741 CDC42BPGQ6DT37 1551 aa25.11■■□□□ 1.61
SMN2-201ENST00000380741 AFF2P51816 1311 aa25.1■■□□□ 1.61
SMN2-201ENST00000380741 TECPR2O15040 1411 aa25.09■■□□□ 1.61
SMN2-201ENST00000380741 PIK3C2GO75747 1445 aa25.09■■□□□ 1.61
SMN2-201ENST00000380741 KNDC1Q76NI1 1749 aa25.09■■□□□ 1.61
SMN2-201ENST00000380741 SOS2Q07890 1332 aaPredicted RBP25.08■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms