RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 RRP9O43818 475 aaKnown RBP20.82■□□□□ 0.92
COL4A3BP-203ENST00000380494 ZKSCAN1P17029 563 aaPredicted RBP20.82■□□□□ 0.92
COL4A3BP-203ENST00000380494 FHOD3Q2V2M9 1422 aa20.81■□□□□ 0.92
COL4A3BP-203ENST00000380494 MNS1Q8NEH6 495 aa20.81■□□□□ 0.92
COL4A3BP-203ENST00000380494 CEP89Q96ST8 783 aa20.81■□□□□ 0.92
COL4A3BP-203ENST00000380494 HOOK1Q9UJC3 728 aaKnown RBP20.81■□□□□ 0.92
COL4A3BP-203ENST00000380494 API5Q9BZZ5 524 aaKnown RBP20.8■□□□□ 0.92
COL4A3BP-203ENST00000380494 AK7Q96M32 723 aa20.8■□□□□ 0.92
COL4A3BP-203ENST00000380494 MBD3O95983 291 aa20.8■□□□□ 0.92
COL4A3BP-203ENST00000380494 BCL2L13Q9BXK5 485 aa20.8■□□□□ 0.92
COL4A3BP-203ENST00000380494 IL27Q8NEV9 243 aa20.79■□□□□ 0.92
COL4A3BP-203ENST00000380494 IPO7O95373 1038 aaKnown RBP20.78■□□□□ 0.92
COL4A3BP-203ENST00000380494 ANKRD20A12PQ8NF67 263 aa20.78■□□□□ 0.92
COL4A3BP-203ENST00000380494 FOXD4L6Q3SYB3 417 aaPredicted RBP20.78■□□□□ 0.92
COL4A3BP-203ENST00000380494 FOXD4L3Q6VB84 417 aaPredicted RBP20.78■□□□□ 0.92
COL4A3BP-203ENST00000380494 BICD2Q8TD16 824 aa20.78■□□□□ 0.92
COL4A3BP-203ENST00000380494 APAF1O14727 1248 aa20.77■□□□□ 0.92
COL4A3BP-203ENST00000380494 CALRP27797 417 aaKnown RBP20.77■□□□□ 0.91
COL4A3BP-203ENST00000380494 EFCAB2Q5VUJ9 269 aa20.77■□□□□ 0.91
COL4A3BP-203ENST00000380494 CDC45O75419 566 aa20.76■□□□□ 0.91
COL4A3BP-203ENST00000380494 SMC3Q9UQE7 1217 aa20.76■□□□□ 0.91
COL4A3BP-203ENST00000380494 HSP90B2PQ58FF3 399 aa20.76■□□□□ 0.91
COL4A3BP-203ENST00000380494 TAF7LQ5H9L4 462 aa20.76■□□□□ 0.91
COL4A3BP-203ENST00000380494 LRRFIP1Q32MZ4 808 aaKnown RBP20.76■□□□□ 0.91
COL4A3BP-203ENST00000380494 MIA2Q96PC5 1412 aa20.75■□□□□ 0.91
COL4A3BP-203ENST00000380494 CDR1P51861 262 aa20.75■□□□□ 0.91
COL4A3BP-203ENST00000380494 ANO2Q9NQ90 1003 aa20.75■□□□□ 0.91
COL4A3BP-203ENST00000380494 CHMP3Q9Y3E7 222 aa20.75■□□□□ 0.91
COL4A3BP-203ENST00000380494 RNF20Q5VTR2 975 aa20.75■□□□□ 0.91
COL4A3BP-203ENST00000380494 PES1O00541 588 aaKnown RBP20.75■□□□□ 0.91
COL4A3BP-203ENST00000380494 KIF7Q2M1P5 1343 aa20.74■□□□□ 0.91
COL4A3BP-203ENST00000380494 NAT10Q9H0A0 1025 aaKnown RBP20.74■□□□□ 0.91
COL4A3BP-203ENST00000380494 TSPY26PQ9H489 355 aa20.74■□□□□ 0.91
COL4A3BP-203ENST00000380494 FRAT2O75474 233 aaPredicted RBP20.73■□□□□ 0.91
COL4A3BP-203ENST00000380494 ERCC4Q92889 916 aaPredicted RBP20.73■□□□□ 0.91
COL4A3BP-203ENST00000380494 RUNDC1Q96C34 613 aa20.73■□□□□ 0.91
COL4A3BP-203ENST00000380494 CCP110O43303 1012 aa20.73■□□□□ 0.91
COL4A3BP-203ENST00000380494 CPLX2Q6PUV4 134 aaKnown RBP20.73■□□□□ 0.91
COL4A3BP-203ENST00000380494 RUFY1Q96T51 708 aa20.72■□□□□ 0.91
COL4A3BP-203ENST00000380494 WIZO95785 1651 aa20.72■□□□□ 0.91
COL4A3BP-203ENST00000380494 GGT6Q6P531 493 aa20.71■□□□□ 0.91
COL4A3BP-203ENST00000380494 TRIM29Q14134 588 aa20.71■□□□□ 0.91
COL4A3BP-203ENST00000380494 BACH2Q9BYV9 841 aa20.71■□□□□ 0.91
COL4A3BP-203ENST00000380494 CCDC73Q6ZRK6 1079 aa20.71■□□□□ 0.91
COL4A3BP-203ENST00000380494 NINLQ9Y2I6 1382 aa20.7■□□□□ 0.9
COL4A3BP-203ENST00000380494 CUX1P39880 1505 aa20.7■□□□□ 0.9
COL4A3BP-203ENST00000380494 DHX8Q14562 1220 aaKnown RBP20.7■□□□□ 0.9
COL4A3BP-203ENST00000380494 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.69■□□□□ 0.9
COL4A3BP-203ENST00000380494 AKAP17AQ02040 695 aaKnown RBP20.69■□□□□ 0.9
COL4A3BP-203ENST00000380494 MCM2P49736 904 aa20.69■□□□□ 0.9
COL4A3BP-203ENST00000380494 SYNE3Q6ZMZ3 975 aa20.69■□□□□ 0.9
COL4A3BP-203ENST00000380494 CCDC47Q96A33 483 aaKnown RBP20.69■□□□□ 0.9
COL4A3BP-203ENST00000380494 ERCC6Q03468 1493 aa20.69■□□□□ 0.9
COL4A3BP-203ENST00000380494 PAK3O75914 559 aaPredicted RBP20.68■□□□□ 0.9
COL4A3BP-203ENST00000380494 SMG6Q86US8 1419 aaKnown RBP20.68■□□□□ 0.9
COL4A3BP-203ENST00000380494 EVC2Q86UK5 1308 aa20.68■□□□□ 0.9
COL4A3BP-203ENST00000380494 TAF3Q5VWG9 929 aa20.68■□□□□ 0.9
COL4A3BP-203ENST00000380494 GRPEL1Q9HAV7 217 aa20.67■□□□□ 0.9
COL4A3BP-203ENST00000380494 CAVIN1Q6NZI2 390 aaKnown RBP20.67■□□□□ 0.9
COL4A3BP-203ENST00000380494 VPS37CA5D8V6 355 aaPredicted RBP20.67■□□□□ 0.9
COL4A3BP-203ENST00000380494 RABEP1Q15276 862 aa20.66■□□□□ 0.9
COL4A3BP-203ENST00000380494 TOMM22Q9NS69 142 aa20.66■□□□□ 0.9
COL4A3BP-203ENST00000380494 CWC22Q9HCG8 908 aaKnown RBP20.65■□□□□ 0.9
COL4A3BP-203ENST00000380494 HNRNPMP52272 730 aaKnown RBP eCLIP20.64■□□□□ 0.97e-7■■■■□ 23.6
COL4A3BP-203ENST00000380494 HSP90AB4PQ58FF6 505 aa20.64■□□□□ 0.89
COL4A3BP-203ENST00000380494 AMPHP49418 695 aa20.63■□□□□ 0.89
COL4A3BP-203ENST00000380494 LNPKQ9C0E8 428 aa20.63■□□□□ 0.89
COL4A3BP-203ENST00000380494 IFIT2P09913 472 aaKnown RBP20.62■□□□□ 0.89
COL4A3BP-203ENST00000380494 LEKR1Q6ZMV7 388 aa20.62■□□□□ 0.89
COL4A3BP-203ENST00000380494 MARCH6O60337 910 aa20.62■□□□□ 0.89
COL4A3BP-203ENST00000380494 RBM10P98175 930 aaKnown RBP20.62■□□□□ 0.89
COL4A3BP-203ENST00000380494 PCMTD1Q96MG8 357 aaPredicted RBP20.62■□□□□ 0.89
COL4A3BP-203ENST00000380494 WASHC2AQ641Q2 1341 aa20.62■□□□□ 0.89
COL4A3BP-203ENST00000380494 ERC2O15083 957 aa20.62■□□□□ 0.89
COL4A3BP-203ENST00000380494 CPLX1O14810 134 aa20.61■□□□□ 0.89
COL4A3BP-203ENST00000380494 DIAPH1O60610 1272 aaKnown RBP20.61■□□□□ 0.89
COL4A3BP-203ENST00000380494 RDXP35241 583 aaKnown RBP20.61■□□□□ 0.89
COL4A3BP-203ENST00000380494 PDE3AQ14432 1141 aa20.61■□□□□ 0.89
COL4A3BP-203ENST00000380494 STAC3Q96MF2 364 aa20.61■□□□□ 0.89
COL4A3BP-203ENST00000380494 ELL2O00472 640 aaPredicted RBP20.61■□□□□ 0.89
COL4A3BP-203ENST00000380494 KIF3BO15066 747 aa20.6■□□□□ 0.89
COL4A3BP-203ENST00000380494 DCTN1Q14203 1278 aa20.6■□□□□ 0.89
COL4A3BP-203ENST00000380494 OLFM4Q6UX06 510 aa20.6■□□□□ 0.89
COL4A3BP-203ENST00000380494 RNF214Q8ND24 703 aa20.6■□□□□ 0.89
COL4A3BP-203ENST00000380494 CIZ1Q9ULV3 898 aaPredicted RBP20.6■□□□□ 0.89
COL4A3BP-203ENST00000380494 UQCRHLA0A096LP55 91 aa20.6■□□□□ 0.89
COL4A3BP-203ENST00000380494 UQCRHP07919 91 aa20.6■□□□□ 0.89
COL4A3BP-203ENST00000380494 RIPK4P57078 832 aa20.6■□□□□ 0.89
COL4A3BP-203ENST00000380494 GNAI1P63096 354 aa20.6■□□□□ 0.89
COL4A3BP-203ENST00000380494 CSB-PGBD3P0DP91 1061 aa20.6■□□□□ 0.89
COL4A3BP-203ENST00000380494 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.6■□□□□ 0.893e-10■■■■■ 33.9
COL4A3BP-203ENST00000380494 PANK1Q8TE04 598 aa20.6■□□□□ 0.89
COL4A3BP-203ENST00000380494 TRAK1Q9UPV9 953 aa20.6■□□□□ 0.89
COL4A3BP-203ENST00000380494 PATL2C9JE40 543 aaKnown RBP20.59■□□□□ 0.89
COL4A3BP-203ENST00000380494 COG3Q96JB2 828 aa20.59■□□□□ 0.89
COL4A3BP-203ENST00000380494 FGD6Q6ZV73 1430 aa20.59■□□□□ 0.89
COL4A3BP-203ENST00000380494 TRIM5Q9C035 493 aa20.59■□□□□ 0.89
COL4A3BP-203ENST00000380494 ESPNB1AK53 854 aa20.58■□□□□ 0.89
COL4A3BP-203ENST00000380494 PSMA5P28066 241 aa20.58■□□□□ 0.89
COL4A3BP-203ENST00000380494 APPP05067 770 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms