RNA–Protein interactions for RNA: ENST00000379600.7

NHLRC3-202, Transcript of NHL repeat containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLRC3, Length 3,549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-202ENST00000379600 GSE1Q14687 1217 aa12.27□□□□□ -0.45
NHLRC3-202ENST00000379600 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.27□□□□□ -0.45
NHLRC3-202ENST00000379600 SYNMO15061 1565 aa12.27□□□□□ -0.45
NHLRC3-202ENST00000379600 SPINK5Q9NQ38 1064 aaPredicted RBP12.27□□□□□ -0.45
NHLRC3-202ENST00000379600 FAM161AQ3B820 660 aa12.26□□□□□ -0.45
NHLRC3-202ENST00000379600 TRMT2AQ8IZ69 625 aaKnown RBP12.26□□□□□ -0.45
NHLRC3-202ENST00000379600 FRAT1Q92837 279 aaPredicted RBP12.25□□□□□ -0.45
NHLRC3-202ENST00000379600 ARHGAP5Q13017 1502 aa12.25□□□□□ -0.45
NHLRC3-202ENST00000379600 SLFN5Q08AF3 891 aa12.25□□□□□ -0.45
NHLRC3-202ENST00000379600 RSPH4AQ5TD94 716 aa12.25□□□□□ -0.45
NHLRC3-202ENST00000379600 SPHKAPQ2M3C7 1700 aa12.24□□□□□ -0.45
NHLRC3-202ENST00000379600 GOLGA2Q08379 1002 aa12.23□□□□□ -0.45
NHLRC3-202ENST00000379600 ASXL1Q8IXJ9 1541 aa12.23□□□□□ -0.45
NHLRC3-202ENST00000379600 DUOX2Q9NRD8 1548 aa12.23□□□□□ -0.45
NHLRC3-202ENST00000379600 PIK3C2GO75747 1445 aa12.23□□□□□ -0.45
NHLRC3-202ENST00000379600 ERCC6Q03468 1493 aa12.22□□□□□ -0.45
NHLRC3-202ENST00000379600 USP19O94966 1318 aa12.22□□□□□ -0.45
NHLRC3-202ENST00000379600 DMRT2Q9Y5R5 561 aa12.22□□□□□ -0.45
NHLRC3-202ENST00000379600 ABCC2Q92887 1545 aa12.22□□□□□ -0.45
NHLRC3-202ENST00000379600 WDR43Q15061 677 aaKnown RBP eCLIP12.21□□□□□ -0.45
NHLRC3-202ENST00000379600 CCDC146Q8IYE0 955 aa12.21□□□□□ -0.45
NHLRC3-202ENST00000379600 KNSTRNQ9Y448 316 aa12.21□□□□□ -0.45
NHLRC3-202ENST00000379600 CEP152O94986 1710 aa12.21□□□□□ -0.45
NHLRC3-202ENST00000379600 EIF3AQ14152 1382 aaKnown RBP12.21□□□□□ -0.46
NHLRC3-202ENST00000379600 FRAT2O75474 233 aaPredicted RBP12.21□□□□□ -0.46
NHLRC3-202ENST00000379600 BCAR3O75815 825 aa12.21□□□□□ -0.46
NHLRC3-202ENST00000379600 RGS3P49796 1198 aa12.2□□□□□ -0.46
NHLRC3-202ENST00000379600 NKTRP30414 1462 aaKnown RBP12.2□□□□□ -0.46
NHLRC3-202ENST00000379600 IGHDP01880 384 aa12.2□□□□□ -0.46
NHLRC3-202ENST00000379600 CLTCL1P53675 1640 aa12.19□□□□□ -0.46
NHLRC3-202ENST00000379600 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.19□□□□□ -0.46
NHLRC3-202ENST00000379600 SCAF11Q99590 1463 aaKnown RBP12.19□□□□□ -0.46
NHLRC3-202ENST00000379600 TRPM2O94759 1503 aa12.18□□□□□ -0.46
NHLRC3-202ENST00000379600 SCAPERQ9BY12 1400 aa12.18□□□□□ -0.46
NHLRC3-202ENST00000379600 NLRP1Q9C000 1473 aa12.18□□□□□ -0.46
NHLRC3-202ENST00000379600 NPC1L1Q9UHC9 1359 aa12.17□□□□□ -0.46
NHLRC3-202ENST00000379600 KDM5AP29375 1690 aaKnown RBP12.17□□□□□ -0.46
NHLRC3-202ENST00000379600 APAF1O14727 1248 aa12.17□□□□□ -0.46
NHLRC3-202ENST00000379600 SEC24BO95487 1268 aa12.17□□□□□ -0.46
NHLRC3-202ENST00000379600 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.16□□□□□ -0.46
NHLRC3-202ENST00000379600 PTPRTO14522 1441 aa12.15□□□□□ -0.47
NHLRC3-202ENST00000379600 SHPRHQ149N8 1683 aa12.14□□□□□ -0.47
NHLRC3-202ENST00000379600 ABCC1P33527 1531 aa12.14□□□□□ -0.47
NHLRC3-202ENST00000379600 KIAA1210Q9ULL0 1709 aa12.14□□□□□ -0.47
NHLRC3-202ENST00000379600 ERCC6L2Q5T890 1561 aa12.14□□□□□ -0.47
NHLRC3-202ENST00000379600 DAXXQ9UER7 740 aaPredicted RBP12.14□□□□□ -0.47
NHLRC3-202ENST00000379600 TRAPPC8Q9Y2L5 1435 aa12.14□□□□□ -0.47
NHLRC3-202ENST00000379600 CARD14Q9BXL6 1004 aa12.14□□□□□ -0.47
NHLRC3-202ENST00000379600 ERVK-7P63135 1459 aa12.13□□□□□ -0.47
NHLRC3-202ENST00000379600 SHROOM2Q13796 1616 aa12.13□□□□□ -0.47
NHLRC3-202ENST00000379600 DEPDC5O75140 1603 aa12.13□□□□□ -0.47
NHLRC3-202ENST00000379600 CHD1O14646 1710 aa12.12□□□□□ -0.47
NHLRC3-202ENST00000379600 E9PSI1 815 aa12.12□□□□□ -0.47
NHLRC3-202ENST00000379600 ABCA6Q8N139 1617 aa12.12□□□□□ -0.47
NHLRC3-202ENST00000379600 PANK1Q8TE04 598 aa12.11□□□□□ -0.47
NHLRC3-202ENST00000379600 PLCH2O75038 1416 aa12.11□□□□□ -0.47
NHLRC3-202ENST00000379600 CDCA8Q53HL2 280 aa12.1□□□□□ -0.47
NHLRC3-202ENST00000379600 TET3O43151 1660 aa12.1□□□□□ -0.47
NHLRC3-202ENST00000379600 ZFYVE16Q7Z3T8 1539 aa12.1□□□□□ -0.47
NHLRC3-202ENST00000379600 PDE3AQ14432 1141 aa12.09□□□□□ -0.47
NHLRC3-202ENST00000379600 CLUAP1Q96AJ1 413 aa12.09□□□□□ -0.47
NHLRC3-202ENST00000379600 POGKQ9P215 609 aa12.09□□□□□ -0.47
NHLRC3-202ENST00000379600 COG6Q9Y2V7 657 aa12.09□□□□□ -0.47
NHLRC3-202ENST00000379600 UGGT1Q9NYU2 1555 aa12.09□□□□□ -0.47
NHLRC3-202ENST00000379600 WWC1Q8IX03 1113 aa12.08□□□□□ -0.47
NHLRC3-202ENST00000379600 VWDEQ8N2E2 1590 aa12.08□□□□□ -0.47
NHLRC3-202ENST00000379600 MAP3K4Q9Y6R4 1608 aa12.08□□□□□ -0.47
NHLRC3-202ENST00000379600 IFT172Q9UG01 1749 aa12.08□□□□□ -0.47
NHLRC3-202ENST00000379600 IQSEC2Q5JU85 1478 aa12.08□□□□□ -0.48
NHLRC3-202ENST00000379600 CGNL1Q0VF96 1302 aa12.08□□□□□ -0.48
NHLRC3-202ENST00000379600 ANTXR1Q9H6X2 564 aa12.08□□□□□ -0.48
NHLRC3-202ENST00000379600 TNNQ9UQP3 1299 aa12.08□□□□□ -0.48
NHLRC3-202ENST00000379600 ZCCHC11Q5TAX3 1644 aaKnown RBP12.08□□□□□ -0.48
NHLRC3-202ENST00000379600 MYO3AQ8NEV4 1616 aa12.08□□□□□ -0.48
NHLRC3-202ENST00000379600 CENPJQ9HC77 1338 aaPredicted RBP12.07□□□□□ -0.48
NHLRC3-202ENST00000379600 RLBP1P12271 317 aa12.07□□□□□ -0.48
NHLRC3-202ENST00000379600 MROH2AA6NES4 1674 aa12.06□□□□□ -0.48
NHLRC3-202ENST00000379600 NEURL4Q96JN8 1562 aa12.06□□□□□ -0.48
NHLRC3-202ENST00000379600 PCDHB15Q9Y5E8 787 aa12.06□□□□□ -0.48
NHLRC3-202ENST00000379600 POLR3AO14802 1390 aaPredicted RBP12.06□□□□□ -0.48
NHLRC3-202ENST00000379600 CFAP70Q5T0N1 1121 aa12.06□□□□□ -0.48
NHLRC3-202ENST00000379600 NINLQ9Y2I6 1382 aa12.06□□□□□ -0.48
NHLRC3-202ENST00000379600 MAPK8IP3Q9UPT6 1336 aa12.06□□□□□ -0.48
NHLRC3-202ENST00000379600 MROH1Q8NDA8 1641 aa12.05□□□□□ -0.48
NHLRC3-202ENST00000379600 MYOM2P54296 1465 aa12.05□□□□□ -0.48
NHLRC3-202ENST00000379600 ADGRF5Q8IZF2 1346 aa12.05□□□□□ -0.48
NHLRC3-202ENST00000379600 ZC3H13Q5T200 1668 aaKnown RBP12.04□□□□□ -0.48
NHLRC3-202ENST00000379600 RARSP54136 660 aaKnown RBP12.04□□□□□ -0.48
NHLRC3-202ENST00000379600 STAC3Q96MF2 364 aa12.04□□□□□ -0.48
NHLRC3-202ENST00000379600 PHF23Q9BUL5 403 aaPredicted RBP12.04□□□□□ -0.48
NHLRC3-202ENST00000379600 AFAP1Q8N556 730 aa12.04□□□□□ -0.48
NHLRC3-202ENST00000379600 SLKQ9H2G2 1235 aaPredicted RBP12.04□□□□□ -0.48
NHLRC3-202ENST00000379600 FAM43AQ8N2R8 423 aa12.03□□□□□ -0.48
NHLRC3-202ENST00000379600 RRP7AQ9Y3A4 280 aaKnown RBP12.03□□□□□ -0.48
NHLRC3-202ENST00000379600 RTEL1-TNFRSF6BF6WH68 1400 aa12.03□□□□□ -0.48
NHLRC3-202ENST00000379600 EFCAB2Q5VUJ9 269 aa12.03□□□□□ -0.48
NHLRC3-202ENST00000379600 NGEFQ8N5V2 710 aa12.03□□□□□ -0.48
NHLRC3-202ENST00000379600 TBC1D32Q96NH3 1257 aa12.02□□□□□ -0.48
NHLRC3-202ENST00000379600 INO80Q9ULG1 1556 aaPredicted RBP12.02□□□□□ -0.48
NHLRC3-202ENST00000379600 NRXN1Q9ULB1 1477 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms