RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 NEXMIFQ5QGS0 1516 aa34.63■■■■□ 3.13
ECHDC3-201ENST00000379215 KIAA1210Q9ULL0 1709 aa34.62■■■■□ 3.13
ECHDC3-201ENST00000379215 ZFYVE9O95405 1425 aa34.62■■■■□ 3.13
ECHDC3-201ENST00000379215 KDM5AP29375 1690 aaKnown RBP34.62■■■■□ 3.13
ECHDC3-201ENST00000379215 VGFO15240 615 aaPredicted RBP34.61■■■■□ 3.13
ECHDC3-201ENST00000379215 HSPA5P11021 654 aaKnown RBP34.6■■■■□ 3.13
ECHDC3-201ENST00000379215 USP47Q96K76 1375 aa34.6■■■■□ 3.13
ECHDC3-201ENST00000379215 A2ML1A8K2U0 1454 aa34.58■■■■□ 3.13
ECHDC3-201ENST00000379215 RIMS1Q86UR5 1692 aaKnown RBP34.57■■■■□ 3.12
ECHDC3-201ENST00000379215 ADGRF5Q8IZF2 1346 aa34.56■■■■□ 3.12
ECHDC3-201ENST00000379215 PIK3C2GO75747 1445 aa34.55■■■■□ 3.12
ECHDC3-201ENST00000379215 CEBPAP49715 358 aaPredicted RBP34.53■■■■□ 3.12
ECHDC3-201ENST00000379215 MYO5BQ9ULV0 1848 aa34.53■■■■□ 3.12
ECHDC3-201ENST00000379215 NBPF1Q3BBV0 1214 aa34.49■■■■□ 3.11
ECHDC3-201ENST00000379215 HDGFP51858 240 aaKnown RBP34.48■■■■□ 3.11
ECHDC3-201ENST00000379215 SETBP1Q9Y6X0 1596 aa34.46■■■■□ 3.11
ECHDC3-201ENST00000379215 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.46■■■■□ 3.11
ECHDC3-201ENST00000379215 HIRIP3Q9BW71 556 aaPredicted RBP34.46■■■■□ 3.11
ECHDC3-201ENST00000379215 RIMS2Q9UQ26 1411 aa34.46■■■■□ 3.11
ECHDC3-201ENST00000379215 DIEXFQ68CQ4 756 aaKnown RBP34.45■■■■□ 3.11
ECHDC3-201ENST00000379215 UBR1Q8IWV7 1749 aa34.45■■■■□ 3.11
ECHDC3-201ENST00000379215 C14orf93Q9H972 538 aaKnown RBP34.43■■■■□ 3.1
ECHDC3-201ENST00000379215 SCAF11Q99590 1463 aaKnown RBP34.42■■■■□ 3.1
ECHDC3-201ENST00000379215 MYO3AQ8NEV4 1616 aa34.41■■■■□ 3.1
ECHDC3-201ENST00000379215 CFAP70Q5T0N1 1121 aa34.41■■■■□ 3.1
ECHDC3-201ENST00000379215 EIF3AQ14152 1382 aaKnown RBP34.39■■■■□ 3.1
ECHDC3-201ENST00000379215 TMEM2Q9UHN6 1383 aa34.38■■■■□ 3.09
ECHDC3-201ENST00000379215 IQGAP1P46940 1657 aa34.38■■■■□ 3.09
ECHDC3-201ENST00000379215 PLPPR3Q6T4P5 718 aa34.37■■■■□ 3.09
ECHDC3-201ENST00000379215 NUTM2DQ5VT03 806 aaPredicted RBP34.34■■■■□ 3.09
ECHDC3-201ENST00000379215 ST20-MTHFSA0A0A6YYL1 179 aa34.33■■■■□ 3.09
ECHDC3-201ENST00000379215 PTPRMP28827 1452 aa34.33■■■■□ 3.09
ECHDC3-201ENST00000379215 ADGRB1O14514 1584 aa34.32■■■■□ 3.08
ECHDC3-201ENST00000379215 CEP170BQ9Y4F5 1589 aaPredicted RBP34.31■■■■□ 3.08
ECHDC3-201ENST00000379215 THEMISQ8N1K5 641 aaPredicted RBP34.31■■■■□ 3.08
ECHDC3-201ENST00000379215 SLIT1O75093 1534 aa34.3■■■■□ 3.08
ECHDC3-201ENST00000379215 POLR1AO95602 1720 aaPredicted RBP34.29■■■■□ 3.08
ECHDC3-201ENST00000379215 ARHGAP23Q9P227 1491 aa34.28■■■■□ 3.08
ECHDC3-201ENST00000379215 ZNF142P52746 1687 aaPredicted RBP34.27■■■■□ 3.08
ECHDC3-201ENST00000379215 CCDC7Q96M83 1385 aa34.27■■■■□ 3.08
ECHDC3-201ENST00000379215 SLC24A1O60721 1099 aa34.26■■■■□ 3.08
ECHDC3-201ENST00000379215 WASHC2AQ641Q2 1341 aa34.26■■■■□ 3.08
ECHDC3-201ENST00000379215 SETD1BQ9UPS6 1966 aaKnown RBP34.25■■■■□ 3.07
ECHDC3-201ENST00000379215 EID1Q9Y6B2 187 aa34.25■■■■□ 3.07
ECHDC3-201ENST00000379215 ALKQ9UM73 1620 aa34.23■■■■□ 3.07
ECHDC3-201ENST00000379215 KIF7Q2M1P5 1343 aa34.2■■■■□ 3.07
ECHDC3-201ENST00000379215 PLEKHG1Q9ULL1 1385 aa34.2■■■■□ 3.06
ECHDC3-201ENST00000379215 DDX10Q13206 875 aaKnown RBP34.18■■■■□ 3.06
ECHDC3-201ENST00000379215 TESK2Q96S53 571 aa34.17■■■■□ 3.06
ECHDC3-201ENST00000379215 C11orf95C9JLR9 678 aaPredicted RBP34.16■■■■□ 3.06
ECHDC3-201ENST00000379215 TXNDC2Q86VQ3 553 aa34.16■■■■□ 3.06
ECHDC3-201ENST00000379215 ASXL1Q8IXJ9 1541 aa34.16■■■■□ 3.06
ECHDC3-201ENST00000379215 TMF1P82094 1093 aa34.15■■■■□ 3.06
ECHDC3-201ENST00000379215 TMEM132EQ6IEE7 984 aa34.15■■■■□ 3.06
ECHDC3-201ENST00000379215 SBNO2Q9Y2G9 1366 aa34.14■■■■□ 3.06
ECHDC3-201ENST00000379215 NRXN3Q9Y4C0 1643 aa34.14■■■■□ 3.06
ECHDC3-201ENST00000379215 SETD1AO15047 1707 aaKnown RBP34.11■■■■□ 3.05
ECHDC3-201ENST00000379215 YTHDC2Q9H6S0 1430 aaKnown RBP34.11■■■■□ 3.05
ECHDC3-201ENST00000379215 CENPJQ9HC77 1338 aaPredicted RBP34.1■■■■□ 3.05
ECHDC3-201ENST00000379215 LTKP29376 864 aa34.1■■■■□ 3.05
ECHDC3-201ENST00000379215 CDCA8Q53HL2 280 aa34.1■■■■□ 3.05
ECHDC3-201ENST00000379215 TRAK1Q9UPV9 953 aa34.1■■■■□ 3.05
ECHDC3-201ENST00000379215 BCANQ96GW7 911 aa34.08■■■■□ 3.05
ECHDC3-201ENST00000379215 LRPPRCP42704 1394 aaKnown RBP34.06■■■■□ 3.04
ECHDC3-201ENST00000379215 ARHGEF28Q8N1W1 1705 aaKnown RBP34.05■■■■□ 3.04
ECHDC3-201ENST00000379215 DIP2AQ14689 1571 aa34.05■■■■□ 3.04
ECHDC3-201ENST00000379215 DLC1Q96QB1 1528 aa34.05■■■■□ 3.04
ECHDC3-201ENST00000379215 ADAMTS13Q76LX8 1427 aa34.04■■■■□ 3.04
ECHDC3-201ENST00000379215 ANKLE2Q86XL3 938 aa34.02■■■■□ 3.04
ECHDC3-201ENST00000379215 DISP3Q9P2K9 1392 aa34.02■■■■□ 3.04
ECHDC3-201ENST00000379215 ABCC11Q96J66 1382 aa34.01■■■■□ 3.04
ECHDC3-201ENST00000379215 MED14O60244 1454 aa34.01■■■■□ 3.03
ECHDC3-201ENST00000379215 SENP3Q9H4L4 574 aaPredicted RBP34■■■■□ 3.03
ECHDC3-201ENST00000379215 QRICH2Q9H0J4 1663 aa34■■■■□ 3.03
ECHDC3-201ENST00000379215 POLR3GLQ9BT43 218 aa33.99■■■■□ 3.03
ECHDC3-201ENST00000379215 KDM4FA0A1W2PPD8 638 aa33.97■■■■□ 3.03
ECHDC3-201ENST00000379215 STK26Q9P289 416 aa33.97■■■■□ 3.03
ECHDC3-201ENST00000379215 METP08581 1390 aa33.97■■■■□ 3.03
ECHDC3-201ENST00000379215 TBX22Q9Y458 520 aa33.97■■■■□ 3.03
ECHDC3-201ENST00000379215 TECPR2O15040 1411 aa33.96■■■■□ 3.03
ECHDC3-201ENST00000379215 KNDC1Q76NI1 1749 aa33.95■■■■□ 3.03
ECHDC3-201ENST00000379215 SIRT1Q96EB6 747 aa33.93■■■■□ 3.02
ECHDC3-201ENST00000379215 POGKQ9P215 609 aa33.91■■■■□ 3.02
ECHDC3-201ENST00000379215 FAM135BQ49AJ0 1406 aa33.9■■■■□ 3.02
ECHDC3-201ENST00000379215 PIK3R4Q99570 1358 aa33.9■■■■□ 3.02
ECHDC3-201ENST00000379215 CPS1P31327 1500 aa33.9■■■■□ 3.02
ECHDC3-201ENST00000379215 PRAM1Q96QH2 718 aa33.89■■■■□ 3.02
ECHDC3-201ENST00000379215 MIER1Q8N108 512 aa33.88■■■■□ 3.01
ECHDC3-201ENST00000379215 PUS7Q96PZ0 661 aaKnown RBP33.88■■■■□ 3.01
ECHDC3-201ENST00000379215 ANP32CO43423 234 aa33.87■■■■□ 3.01
ECHDC3-201ENST00000379215 EVC2Q86UK5 1308 aa33.87■■■■□ 3.01
ECHDC3-201ENST00000379215 SLC26A8Q96RN1 970 aa33.86■■■■□ 3.01
ECHDC3-201ENST00000379215 NPHP4O75161 1426 aaPredicted RBP33.82■■■■□ 3
ECHDC3-201ENST00000379215 PTCH1Q13635 1447 aa33.79■■■■□ 3
ECHDC3-201ENST00000379215 TULP4Q9NRJ4 1543 aa33.78■■■■□ 3
ECHDC3-201ENST00000379215 SAFB2Q14151 953 aaKnown RBP eCLIP33.76■■■■□ 3
ECHDC3-201ENST00000379215 PTPRUQ92729 1446 aa33.75■■■□□ 2.99
ECHDC3-201ENST00000379215 AMOTL2Q9Y2J4 779 aa33.73■■■□□ 2.99
ECHDC3-201ENST00000379215 XRN1Q8IZH2 1706 aaKnown RBP33.72■■■□□ 2.99
ECHDC3-201ENST00000379215 MINK1Q8N4C8 1332 aaPredicted RBP33.72■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms