RNA–Protein interactions for RNA: ENST00000377918.7

PCDH17-201, Transcript of protocadherin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH17, Length 8,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-201ENST00000377918 ZNF592Q92610 1267 aa17.66■□□□□ 0.42
PCDH17-201ENST00000377918 NAP1L1P55209 391 aaKnown RBP17.66■□□□□ 0.42
PCDH17-201ENST00000377918 DESP17661 470 aa17.65■□□□□ 0.42
PCDH17-201ENST00000377918 DCAF11Q8TEB1 546 aa17.65■□□□□ 0.42
PCDH17-201ENST00000377918 GTF2E1P29083 439 aaPredicted RBP17.65■□□□□ 0.42
PCDH17-201ENST00000377918 CCDC39Q9UFE4 941 aa17.65■□□□□ 0.42
PCDH17-201ENST00000377918 EIF3JO75822 258 aaKnown RBP17.65■□□□□ 0.42
PCDH17-201ENST00000377918 FAM161AQ3B820 660 aa17.65■□□□□ 0.42
PCDH17-201ENST00000377918 CPLX1O14810 134 aa17.65■□□□□ 0.42
PCDH17-201ENST00000377918 NACADO15069 1562 aa17.64■□□□□ 0.42
PCDH17-201ENST00000377918 U2AF1L5P0DN76 240 aaPredicted RBP17.64■□□□□ 0.41
PCDH17-201ENST00000377918 U2AF1Q01081 240 aaKnown RBP eCLIP17.64■□□□□ 0.41
PCDH17-201ENST00000377918 NEFHP12036 1026 aa17.64■□□□□ 0.41
PCDH17-201ENST00000377918 GBP2P32456 591 aaPredicted RBP17.64■□□□□ 0.41
PCDH17-201ENST00000377918 TOMM22Q9NS69 142 aa17.63■□□□□ 0.41
PCDH17-201ENST00000377918 TNIKQ9UKE5 1360 aa17.63■□□□□ 0.41
PCDH17-201ENST00000377918 PDIA4P13667 645 aaKnown RBP17.63■□□□□ 0.41
PCDH17-201ENST00000377918 DEF6Q9H4E7 631 aa17.63■□□□□ 0.41
PCDH17-201ENST00000377918 SETD5Q9C0A6 1442 aa17.62■□□□□ 0.41
PCDH17-201ENST00000377918 DNAI2Q9GZS0 605 aa17.62■□□□□ 0.41
PCDH17-201ENST00000377918 APBB1O00213 710 aa17.62■□□□□ 0.41
PCDH17-201ENST00000377918 MCTP1Q6DN14 999 aa17.62■□□□□ 0.41
PCDH17-201ENST00000377918 TRIM21P19474 475 aaKnown RBP17.62■□□□□ 0.41
PCDH17-201ENST00000377918 FILIP1LQ4L180 1135 aa17.61■□□□□ 0.41
PCDH17-201ENST00000377918 SYCP1Q15431 976 aa17.61■□□□□ 0.41
PCDH17-201ENST00000377918 CCDC73Q6ZRK6 1079 aa17.61■□□□□ 0.41
PCDH17-201ENST00000377918 CSB-PGBD3P0DP91 1061 aa17.61■□□□□ 0.41
PCDH17-201ENST00000377918 NF2P35240 595 aa17.61■□□□□ 0.41
PCDH17-201ENST00000377918 PDCP20941 246 aa17.6■□□□□ 0.41
PCDH17-201ENST00000377918 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.6■□□□□ 0.41
PCDH17-201ENST00000377918 TXLNAP40222 546 aa17.6■□□□□ 0.41
PCDH17-201ENST00000377918 PPM1EQ8WY54 764 aa17.59■□□□□ 0.41
PCDH17-201ENST00000377918 SEPT11Q9NVA2 429 aaKnown RBP17.59■□□□□ 0.41
PCDH17-201ENST00000377918 KIF15Q9NS87 1388 aa17.59■□□□□ 0.41
PCDH17-201ENST00000377918 TSPYL1Q9H0U9 437 aa17.58■□□□□ 0.41
PCDH17-201ENST00000377918 MCM2P49736 904 aa17.58■□□□□ 0.4
PCDH17-201ENST00000377918 IFT57Q9NWB7 429 aa17.58■□□□□ 0.4
PCDH17-201ENST00000377918 NINLQ9Y2I6 1382 aa17.58■□□□□ 0.4
PCDH17-201ENST00000377918 BAZ1BQ9UIG0 1483 aaKnown RBP17.57■□□□□ 0.4
PCDH17-201ENST00000377918 CT47B1P0C2W7 299 aaPredicted RBP17.57■□□□□ 0.4
PCDH17-201ENST00000377918 BICD2Q8TD16 824 aa17.57■□□□□ 0.4
PCDH17-201ENST00000377918 KIF3BO15066 747 aa17.57■□□□□ 0.4
PCDH17-201ENST00000377918 ZNHIT6Q9NWK9 470 aaKnown RBP17.57■□□□□ 0.4
PCDH17-201ENST00000377918 NLRP13Q86W25 1043 aa17.57■□□□□ 0.4
PCDH17-201ENST00000377918 HSP90AB4PQ58FF6 505 aa17.56■□□□□ 0.4
PCDH17-201ENST00000377918 ERCC6Q03468 1493 aa17.56■□□□□ 0.4
PCDH17-201ENST00000377918 DDX58O95786 925 aaKnown RBP17.55■□□□□ 0.4
PCDH17-201ENST00000377918 SLC26A8Q96RN1 970 aa17.55■□□□□ 0.4
PCDH17-201ENST00000377918 FAM13BQ9NYF5 915 aa17.55■□□□□ 0.4
PCDH17-201ENST00000377918 CCDC91Q7Z6B0 441 aa17.55■□□□□ 0.4
PCDH17-201ENST00000377918 FAM107BQ9H098 131 aa17.55■□□□□ 0.4
PCDH17-201ENST00000377918 ZFYVE27Q5T4F4 411 aa17.55■□□□□ 0.4
PCDH17-201ENST00000377918 MAGEC2Q9UBF1 373 aaPredicted RBP17.55■□□□□ 0.4
PCDH17-201ENST00000377918 PAK3O75914 559 aaPredicted RBP17.55■□□□□ 0.4
PCDH17-201ENST00000377918 VPS37DQ86XT2 251 aa17.55■□□□□ 0.4
PCDH17-201ENST00000377918 SPATA24Q86W54 205 aa17.54■□□□□ 0.4
PCDH17-201ENST00000377918 CLASRPQ8N2M8 674 aaKnown RBP17.54■□□□□ 0.4
PCDH17-201ENST00000377918 ERLIN1O75477 346 aa17.54■□□□□ 0.4
PCDH17-201ENST00000377918 PSMA5P28066 241 aa17.54■□□□□ 0.4
PCDH17-201ENST00000377918 ERC2O15083 957 aa17.54■□□□□ 0.4
PCDH17-201ENST00000377918 DHX16O60231 1041 aaKnown RBP17.53■□□□□ 0.4
PCDH17-201ENST00000377918 HMGB1P1B2RPK0 211 aaPredicted RBP17.53■□□□□ 0.4
PCDH17-201ENST00000377918 MBD3O95983 291 aa17.53■□□□□ 0.4
PCDH17-201ENST00000377918 MCM3P25205 808 aa17.53■□□□□ 0.4
PCDH17-201ENST00000377918 EID1Q9Y6B2 187 aa17.53■□□□□ 0.4
PCDH17-201ENST00000377918 STAMBPO95630 424 aa17.53■□□□□ 0.4
PCDH17-201ENST00000377918 RSPH4AQ5TD94 716 aa17.53■□□□□ 0.4
PCDH17-201ENST00000377918 CWC22Q9HCG8 908 aaKnown RBP17.53■□□□□ 0.4
PCDH17-201ENST00000377918 WRNQ14191 1432 aaPredicted RBP eCLIP17.53■□□□□ 0.4
PCDH17-201ENST00000377918 STIM1Q13586 685 aa17.52■□□□□ 0.4
PCDH17-201ENST00000377918 INTS3Q68E01 1043 aaKnown RBP17.52■□□□□ 0.4
PCDH17-201ENST00000377918 CARMIL2Q6F5E8 1435 aa17.52■□□□□ 0.4
PCDH17-201ENST00000377918 DACH1Q9UI36 760 aa17.52■□□□□ 0.39
PCDH17-201ENST00000377918 GOLGA6L10A0A0M3HER8 536 aa17.52■□□□□ 0.39
PCDH17-201ENST00000377918 RILPL2Q969X0 211 aa17.52■□□□□ 0.39
PCDH17-201ENST00000377918 SLC4A10Q6U841 1118 aa17.51■□□□□ 0.39
PCDH17-201ENST00000377918 PDCL2Q8N4E4 241 aa17.51■□□□□ 0.39
PCDH17-201ENST00000377918 ZNF330Q9Y3S2 320 aaPredicted RBP17.51■□□□□ 0.39
PCDH17-201ENST00000377918 HMGB1P09429 215 aaKnown RBP17.51■□□□□ 0.39
PCDH17-201ENST00000377918 C1orf141Q5JVX7 400 aa17.51■□□□□ 0.39
PCDH17-201ENST00000377918 SART3Q15020 963 aaKnown RBP17.51■□□□□ 0.39
PCDH17-201ENST00000377918 POLR3GO15318 223 aaPredicted RBP17.5■□□□□ 0.39
PCDH17-201ENST00000377918 DDX19BQ9UMR2 479 aa17.5■□□□□ 0.39
PCDH17-201ENST00000377918 PRDM2Q13029 1718 aa17.5■□□□□ 0.39
PCDH17-201ENST00000377918 E9PSI1 815 aa17.5■□□□□ 0.39
PCDH17-201ENST00000377918 HIP1O00291 1037 aa17.5■□□□□ 0.39
PCDH17-201ENST00000377918 SMC3Q9UQE7 1217 aa17.5■□□□□ 0.39
PCDH17-201ENST00000377918 DDX11Q96FC9 970 aa17.5■□□□□ 0.39
PCDH17-201ENST00000377918 JMYQ8N9B5 988 aa17.5■□□□□ 0.39
PCDH17-201ENST00000377918 CFAP57Q96MR6 1250 aa17.5■□□□□ 0.39
PCDH17-201ENST00000377918 HMGB2P26583 209 aaKnown RBP17.5■□□□□ 0.39
PCDH17-201ENST00000377918 FMN1Q68DA7 1419 aa17.49■□□□□ 0.39
PCDH17-201ENST00000377918 SLC3A2P08195 630 aaKnown RBP17.49■□□□□ 0.39
PCDH17-201ENST00000377918 ENOX2Q16206 610 aaKnown RBP17.49■□□□□ 0.39
PCDH17-201ENST00000377918 AXDND1Q5T1B0 1012 aaPredicted RBP17.49■□□□□ 0.39
PCDH17-201ENST00000377918 EIF4G1Q04637 1599 aaKnown RBP17.49■□□□□ 0.39
PCDH17-201ENST00000377918 MRE11P49959 708 aa17.48■□□□□ 0.39
PCDH17-201ENST00000377918 CCDC112Q8NEF3 446 aa17.48■□□□□ 0.39
PCDH17-201ENST00000377918 NASPP49321 788 aaPredicted RBP17.48■□□□□ 0.39
PCDH17-201ENST00000377918 RALYLQ86SE5 291 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms