RNA–Protein interactions for RNA: ENST00000376817.8

RACK1-201, Transcript of receptor for activated C kinase 1, humanhuman

TSL 5 BASIC

Gene RACK1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-201ENST00000376817 TRPM2O94759 1503 aa12.66□□□□□ -0.38
RACK1-201ENST00000376817 CHD2O14647 1828 aaKnown RBP12.65□□□□□ -0.39
RACK1-201ENST00000376817 NWD1Q149M9 1564 aa12.64□□□□□ -0.39
RACK1-201ENST00000376817 PLEKHG1Q9ULL1 1385 aa12.63□□□□□ -0.39
RACK1-201ENST00000376817 NRXN3Q9Y4C0 1643 aa12.62□□□□□ -0.39
RACK1-201ENST00000376817 KIF1BO60333 1816 aa12.62□□□□□ -0.39
RACK1-201ENST00000376817 UBAP1LF5GYI3 381 aa12.62□□□□□ -0.39
RACK1-201ENST00000376817 ADAMTS13Q76LX8 1427 aa12.62□□□□□ -0.39
RACK1-201ENST00000376817 SLC26A8Q96RN1 970 aa12.61□□□□□ -0.39
RACK1-201ENST00000376817 ILDR2Q71H61 639 aa12.6□□□□□ -0.39
RACK1-201ENST00000376817 NEXMIFQ5QGS0 1516 aa12.6□□□□□ -0.39
RACK1-201ENST00000376817 CHGAP10645 457 aaKnown RBP12.59□□□□□ -0.39
RACK1-201ENST00000376817 TRIM52Q96A61 297 aa12.59□□□□□ -0.39
RACK1-201ENST00000376817 DIP2AQ14689 1571 aa12.59□□□□□ -0.39
RACK1-201ENST00000376817 KCNA6P17658 529 aa12.58□□□□□ -0.4
RACK1-201ENST00000376817 NUTM2DQ5VT03 806 aaPredicted RBP12.58□□□□□ -0.4
RACK1-201ENST00000376817 SENP3Q9H4L4 574 aaPredicted RBP12.58□□□□□ -0.4
RACK1-201ENST00000376817 NKTRP30414 1462 aaKnown RBP12.58□□□□□ -0.4
RACK1-201ENST00000376817 SETBP1Q9Y6X0 1596 aa12.57□□□□□ -0.4
RACK1-201ENST00000376817 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.57□□□□□ -0.4
RACK1-201ENST00000376817 SLC4A1APQ9BWU0 796 aaKnown RBP12.57□□□□□ -0.4
RACK1-201ENST00000376817 PPP1R15AO75807 674 aaPredicted RBP12.56□□□□□ -0.4
RACK1-201ENST00000376817 TBX22Q9Y458 520 aa12.56□□□□□ -0.4
RACK1-201ENST00000376817 SETD1AO15047 1707 aaKnown RBP12.56□□□□□ -0.4
RACK1-201ENST00000376817 PPLO60437 1756 aa12.56□□□□□ -0.4
RACK1-201ENST00000376817 SETD5Q9C0A6 1442 aa12.55□□□□□ -0.4
RACK1-201ENST00000376817 TOM1O60784 492 aa12.55□□□□□ -0.4
RACK1-201ENST00000376817 HDGFP51858 240 aaKnown RBP12.55□□□□□ -0.4
RACK1-201ENST00000376817 FOXD1Q16676 465 aa12.55□□□□□ -0.4
RACK1-201ENST00000376817 TMEM94Q12767 1356 aa12.55□□□□□ -0.4
RACK1-201ENST00000376817 PTPRUQ92729 1446 aa12.54□□□□□ -0.4
RACK1-201ENST00000376817 XRN1Q8IZH2 1706 aaKnown RBP12.54□□□□□ -0.4
RACK1-201ENST00000376817 PIP4K2BP78356 416 aa12.53□□□□□ -0.4
RACK1-201ENST00000376817 RBM33Q96EV2 1170 aaKnown RBP12.53□□□□□ -0.4
RACK1-201ENST00000376817 BCANQ96GW7 911 aa12.53□□□□□ -0.4
RACK1-201ENST00000376817 MPHOSPH9Q99550 1183 aa12.53□□□□□ -0.4
RACK1-201ENST00000376817 IFT172Q9UG01 1749 aa12.53□□□□□ -0.4
RACK1-201ENST00000376817 PIK3R4Q99570 1358 aa12.52□□□□□ -0.41
RACK1-201ENST00000376817 RAB3GAP2Q9H2M9 1393 aa12.52□□□□□ -0.41
RACK1-201ENST00000376817 HSPA1LP34931 641 aa12.51□□□□□ -0.41
RACK1-201ENST00000376817 ZNF326Q5BKZ1 582 aaKnown RBP12.51□□□□□ -0.41
RACK1-201ENST00000376817 SPATA31E1Q6ZUB1 1445 aa12.51□□□□□ -0.41
RACK1-201ENST00000376817 PROSER2Q86WR7 435 aaPredicted RBP12.5□□□□□ -0.41
RACK1-201ENST00000376817 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.49□□□□□ -0.41
RACK1-201ENST00000376817 METP08581 1390 aa12.49□□□□□ -0.41
RACK1-201ENST00000376817 SCAF1Q9H7N4 1312 aaKnown RBP12.49□□□□□ -0.41
RACK1-201ENST00000376817 ROBO1Q9Y6N7 1651 aa12.48□□□□□ -0.41
RACK1-201ENST00000376817 CCDC144AA2RUR9 1427 aa12.47□□□□□ -0.41
RACK1-201ENST00000376817 NCOA3Q9Y6Q9 1424 aa12.47□□□□□ -0.41
RACK1-201ENST00000376817 FAM135BQ49AJ0 1406 aa12.46□□□□□ -0.41
RACK1-201ENST00000376817 RPGRIP1LQ68CZ1 1315 aa12.46□□□□□ -0.41
RACK1-201ENST00000376817 AMOTL2Q9Y2J4 779 aa12.46□□□□□ -0.41
RACK1-201ENST00000376817 ACIN1Q9UKV3 1341 aaKnown RBP12.45□□□□□ -0.42
RACK1-201ENST00000376817 MSH6P52701 1360 aa12.44□□□□□ -0.42
RACK1-201ENST00000376817 NALCNQ8IZF0 1738 aa12.44□□□□□ -0.42
RACK1-201ENST00000376817 PRAG1Q86YV5 1406 aa12.44□□□□□ -0.42
RACK1-201ENST00000376817 MED1Q15648 1581 aaPredicted RBP12.43□□□□□ -0.42
RACK1-201ENST00000376817 VGFO15240 615 aaPredicted RBP12.43□□□□□ -0.42
RACK1-201ENST00000376817 HRCP23327 699 aa12.43□□□□□ -0.42
RACK1-201ENST00000376817 ANKRD30BQ9BXX2 1392 aa12.43□□□□□ -0.42
RACK1-201ENST00000376817 ASXL1Q8IXJ9 1541 aa12.42□□□□□ -0.42
RACK1-201ENST00000376817 ADGRF5Q8IZF2 1346 aa12.42□□□□□ -0.42
RACK1-201ENST00000376817 DISP3Q9P2K9 1392 aa12.42□□□□□ -0.42
RACK1-201ENST00000376817 PTCH1Q13635 1447 aa12.41□□□□□ -0.42
RACK1-201ENST00000376817 NRXN1Q9ULB1 1477 aa12.4□□□□□ -0.42
RACK1-201ENST00000376817 PIK3C2GO75747 1445 aa12.4□□□□□ -0.42
RACK1-201ENST00000376817 RGL3Q3MIN7 710 aa12.4□□□□□ -0.42
RACK1-201ENST00000376817 C19orf44Q9H6X5 657 aa12.4□□□□□ -0.42
RACK1-201ENST00000376817 SLAIN2Q9P270 581 aa12.4□□□□□ -0.42
RACK1-201ENST00000376817 ROBO2Q9HCK4 1378 aa12.4□□□□□ -0.42
RACK1-201ENST00000376817 PHLPP1O60346 1717 aa12.4□□□□□ -0.43
RACK1-201ENST00000376817 KNDC1Q76NI1 1749 aa12.4□□□□□ -0.43
RACK1-201ENST00000376817 DCCP43146 1447 aa12.39□□□□□ -0.43
RACK1-201ENST00000376817 COL16A1Q07092 1604 aaPredicted RBP12.39□□□□□ -0.43
RACK1-201ENST00000376817 ADGRL3Q9HAR2 1447 aa12.38□□□□□ -0.43
RACK1-201ENST00000376817 MYOM2P54296 1465 aa12.38□□□□□ -0.43
RACK1-201ENST00000376817 MST1RQ04912 1400 aa12.37□□□□□ -0.43
RACK1-201ENST00000376817 AHDC1Q5TGY3 1603 aaPredicted RBP12.37□□□□□ -0.43
RACK1-201ENST00000376817 CADPS2Q86UW7 1296 aa12.37□□□□□ -0.43
RACK1-201ENST00000376817 C14orf37Q86TY3 774 aa12.36□□□□□ -0.43
RACK1-201ENST00000376817 NHSL1Q5SYE7 1610 aa12.36□□□□□ -0.43
RACK1-201ENST00000376817 TECPR2O15040 1411 aa12.36□□□□□ -0.43
RACK1-201ENST00000376817 LAMC1P11047 1609 aa12.34□□□□□ -0.43
RACK1-201ENST00000376817 ATF3P18847 181 aa12.34□□□□□ -0.43
RACK1-201ENST00000376817 LRPPRCP42704 1394 aaKnown RBP12.33□□□□□ -0.44
RACK1-201ENST00000376817 BRINP3Q76B58 766 aa12.33□□□□□ -0.44
RACK1-201ENST00000376817 TMEM132EQ6IEE7 984 aa12.32□□□□□ -0.44
RACK1-201ENST00000376817 C14orf93Q9H972 538 aaKnown RBP12.32□□□□□ -0.44
RACK1-201ENST00000376817 SHPRHQ149N8 1683 aa12.32□□□□□ -0.44
RACK1-201ENST00000376817 DHX57Q6P158 1386 aaKnown RBP12.31□□□□□ -0.44
RACK1-201ENST00000376817 ABCC11Q96J66 1382 aa12.31□□□□□ -0.44
RACK1-201ENST00000376817 PLEKHH1Q9ULM0 1364 aa12.31□□□□□ -0.44
RACK1-201ENST00000376817 ADGRB1O14514 1584 aa12.31□□□□□ -0.44
RACK1-201ENST00000376817 CDC42BPGQ6DT37 1551 aa12.31□□□□□ -0.44
RACK1-201ENST00000376817 YTHDC2Q9H6S0 1430 aaKnown RBP12.31□□□□□ -0.44
RACK1-201ENST00000376817 C1orf167Q5SNV9 1468 aa12.3□□□□□ -0.44
RACK1-201ENST00000376817 CFAP70Q5T0N1 1121 aa12.3□□□□□ -0.44
RACK1-201ENST00000376817 WAPLQ7Z5K2 1190 aa12.29□□□□□ -0.44
RACK1-201ENST00000376817 JCADQ9P266 1359 aa12.29□□□□□ -0.44
RACK1-201ENST00000376817 FMN2Q9NZ56 1722 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms