RNA–Protein interactions for RNA: ENST00000375779.6

CLIC1-206, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIC1, Length 1,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-206ENST00000375779 PPARGC1BQ86YN6 1023 aaKnown RBP22.4■■□□□ 1.18
CLIC1-206ENST00000375779 NUP155O75694 1391 aa22.39■■□□□ 1.18
CLIC1-206ENST00000375779 HDGFP51858 240 aaKnown RBP22.39■■□□□ 1.17
CLIC1-206ENST00000375779 PLEKHG1Q9ULL1 1385 aa22.38■■□□□ 1.17
CLIC1-206ENST00000375779 SLC26A8Q96RN1 970 aa22.38■■□□□ 1.17
CLIC1-206ENST00000375779 MYO5BQ9ULV0 1848 aa22.38■■□□□ 1.17
CLIC1-206ENST00000375779 TBX22Q9Y458 520 aa22.37■■□□□ 1.17
CLIC1-206ENST00000375779 RIMS2Q9UQ26 1411 aa22.35■■□□□ 1.17
CLIC1-206ENST00000375779 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.34■■□□□ 1.17
CLIC1-206ENST00000375779 ITGAEP38570 1179 aa22.33■■□□□ 1.17
CLIC1-206ENST00000375779 TMEM94Q12767 1356 aa22.33■■□□□ 1.17
CLIC1-206ENST00000375779 NWD1Q149M9 1564 aa22.33■■□□□ 1.16
CLIC1-206ENST00000375779 FAM135BQ49AJ0 1406 aa22.32■■□□□ 1.16
CLIC1-206ENST00000375779 CHD2O14647 1828 aaKnown RBP22.31■■□□□ 1.16
CLIC1-206ENST00000375779 NAIPQ13075 1403 aa22.31■■□□□ 1.16
CLIC1-206ENST00000375779 SCAF1Q9H7N4 1312 aaKnown RBP22.31■■□□□ 1.16
CLIC1-206ENST00000375779 NKTRP30414 1462 aaKnown RBP22.3■■□□□ 1.16
CLIC1-206ENST00000375779 SOCS7O14512 581 aa22.29■■□□□ 1.16
CLIC1-206ENST00000375779 PROSER2Q86WR7 435 aaPredicted RBP22.29■■□□□ 1.16
CLIC1-206ENST00000375779 ADAMTS13Q76LX8 1427 aa22.29■■□□□ 1.16
CLIC1-206ENST00000375779 NCOA3Q9Y6Q9 1424 aa22.27■■□□□ 1.16
CLIC1-206ENST00000375779 PIK3R4Q99570 1358 aa22.26■■□□□ 1.15
CLIC1-206ENST00000375779 HFM1A2PYH4 1435 aa22.23■■□□□ 1.15
CLIC1-206ENST00000375779 MED1Q15648 1581 aaPredicted RBP22.21■■□□□ 1.15
CLIC1-206ENST00000375779 CHGAP10645 457 aaKnown RBP22.21■■□□□ 1.15
CLIC1-206ENST00000375779 DIP2AQ14689 1571 aa22.21■■□□□ 1.15
CLIC1-206ENST00000375779 SPHKAPQ2M3C7 1700 aa22.2■■□□□ 1.14
CLIC1-206ENST00000375779 PPP1R15AO75807 674 aaPredicted RBP22.2■■□□□ 1.14
CLIC1-206ENST00000375779 RBM33Q96EV2 1170 aaKnown RBP22.2■■□□□ 1.14
CLIC1-206ENST00000375779 BCANQ96GW7 911 aa22.19■■□□□ 1.14
CLIC1-206ENST00000375779 SLAIN2Q9P270 581 aa22.18■■□□□ 1.14
CLIC1-206ENST00000375779 NUTM2DQ5VT03 806 aaPredicted RBP22.17■■□□□ 1.14
CLIC1-206ENST00000375779 PTPRUQ92729 1446 aa22.15■■□□□ 1.14
CLIC1-206ENST00000375779 MSH6P52701 1360 aa22.15■■□□□ 1.14
CLIC1-206ENST00000375779 NRXN3Q9Y4C0 1643 aa22.14■■□□□ 1.14
CLIC1-206ENST00000375779 SETBP1Q9Y6X0 1596 aa22.14■■□□□ 1.13
CLIC1-206ENST00000375779 TRPM2O94759 1503 aa22.14■■□□□ 1.13
CLIC1-206ENST00000375779 C19orf44Q9H6X5 657 aa22.13■■□□□ 1.13
CLIC1-206ENST00000375779 AMOTL2Q9Y2J4 779 aa22.13■■□□□ 1.13
CLIC1-206ENST00000375779 ROBO1Q9Y6N7 1651 aa22.12■■□□□ 1.13
CLIC1-206ENST00000375779 CLTCL1P53675 1640 aa22.11■■□□□ 1.13
CLIC1-206ENST00000375779 NEXMIFQ5QGS0 1516 aa22.09■■□□□ 1.13
CLIC1-206ENST00000375779 RGS17Q9UGC6 210 aaPredicted RBP22.08■■□□□ 1.13
CLIC1-206ENST00000375779 METP08581 1390 aa22.07■■□□□ 1.12
CLIC1-206ENST00000375779 CADPS2Q86UW7 1296 aa22.06■■□□□ 1.12
CLIC1-206ENST00000375779 XRN1Q8IZH2 1706 aaKnown RBP22.06■■□□□ 1.12
CLIC1-206ENST00000375779 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.06■■□□□ 1.12
CLIC1-206ENST00000375779 RPGRIP1LQ68CZ1 1315 aa22.06■■□□□ 1.12
CLIC1-206ENST00000375779 ZNF326Q5BKZ1 582 aaKnown RBP22.05■■□□□ 1.12
CLIC1-206ENST00000375779 SLC4A1APQ9BWU0 796 aaKnown RBP22.05■■□□□ 1.12
CLIC1-206ENST00000375779 KIF1BO60333 1816 aa22.05■■□□□ 1.12
CLIC1-206ENST00000375779 TRIM52Q96A61 297 aa22.04■■□□□ 1.12
CLIC1-206ENST00000375779 VGFO15240 615 aaPredicted RBP22.03■■□□□ 1.12
CLIC1-206ENST00000375779 DCCP43146 1447 aa22.03■■□□□ 1.12
CLIC1-206ENST00000375779 PRAG1Q86YV5 1406 aa21.99■■□□□ 1.11
CLIC1-206ENST00000375779 ACIN1Q9UKV3 1341 aaKnown RBP21.99■■□□□ 1.11
CLIC1-206ENST00000375779 ATF3P18847 181 aa21.98■■□□□ 1.11
CLIC1-206ENST00000375779 MPHOSPH9Q99550 1183 aa21.97■■□□□ 1.11
CLIC1-206ENST00000375779 JCADQ9P266 1359 aa21.97■■□□□ 1.11
CLIC1-206ENST00000375779 SETD1AO15047 1707 aaKnown RBP21.97■■□□□ 1.11
CLIC1-206ENST00000375779 COL16A1Q07092 1604 aaPredicted RBP21.96■■□□□ 1.11
CLIC1-206ENST00000375779 PHLPP1O60346 1717 aa21.96■■□□□ 1.11
CLIC1-206ENST00000375779 AHDC1Q5TGY3 1603 aaPredicted RBP21.95■■□□□ 1.1
CLIC1-206ENST00000375779 BRINP3Q76B58 766 aa21.95■■□□□ 1.1
CLIC1-206ENST00000375779 C14orf37Q86TY3 774 aa21.94■■□□□ 1.1
CLIC1-206ENST00000375779 SPATA31E1Q6ZUB1 1445 aa21.93■■□□□ 1.1
CLIC1-206ENST00000375779 PPLO60437 1756 aa21.92■■□□□ 1.1
CLIC1-206ENST00000375779 MST1RQ04912 1400 aa21.92■■□□□ 1.1
CLIC1-206ENST00000375779 ADGRL3Q9HAR2 1447 aa21.91■■□□□ 1.1
CLIC1-206ENST00000375779 PTCH1Q13635 1447 aa21.9■■□□□ 1.1
CLIC1-206ENST00000375779 SPATA31A6Q5VVP1 1343 aa21.89■■□□□ 1.1
CLIC1-206ENST00000375779 POTEAQ6S8J7 498 aa21.89■■□□□ 1.09
CLIC1-206ENST00000375779 ROBO2Q9HCK4 1378 aa21.87■■□□□ 1.09
CLIC1-206ENST00000375779 SETD5Q9C0A6 1442 aa21.87■■□□□ 1.09
CLIC1-206ENST00000375779 CCDC144AA2RUR9 1427 aa21.86■■□□□ 1.09
CLIC1-206ENST00000375779 ADGRF5Q8IZF2 1346 aa21.85■■□□□ 1.09
CLIC1-206ENST00000375779 ANKRD30BQ9BXX2 1392 aa21.85■■□□□ 1.09
CLIC1-206ENST00000375779 SHPRHQ149N8 1683 aa21.84■■□□□ 1.09
CLIC1-206ENST00000375779 NALCNQ8IZF0 1738 aa21.83■■□□□ 1.09
CLIC1-206ENST00000375779 ASXL1Q8IXJ9 1541 aa21.83■■□□□ 1.09
CLIC1-206ENST00000375779 LAMC1P11047 1609 aa21.82■■□□□ 1.08
CLIC1-206ENST00000375779 NHSL1Q5SYE7 1610 aa21.82■■□□□ 1.08
CLIC1-206ENST00000375779 IFT172Q9UG01 1749 aa21.81■■□□□ 1.08
CLIC1-206ENST00000375779 HRCP23327 699 aa21.81■■□□□ 1.08
CLIC1-206ENST00000375779 C1orf167Q5SNV9 1468 aa21.81■■□□□ 1.08
CLIC1-206ENST00000375779 TECPR2O15040 1411 aa21.8■■□□□ 1.08
CLIC1-206ENST00000375779 LRP6O75581 1613 aa21.8■■□□□ 1.08
CLIC1-206ENST00000375779 LRRC59Q96AG4 307 aaKnown RBP21.8■■□□□ 1.08
CLIC1-206ENST00000375779 ABCC11Q96J66 1382 aa21.79■■□□□ 1.08
CLIC1-206ENST00000375779 RGL3Q3MIN7 710 aa21.79■■□□□ 1.08
CLIC1-206ENST00000375779 SIRT1Q96EB6 747 aa21.78■■□□□ 1.08
CLIC1-206ENST00000375779 PIK3C2GO75747 1445 aa21.77■■□□□ 1.08
CLIC1-206ENST00000375779 C14orf93Q9H972 538 aaKnown RBP21.76■■□□□ 1.07
CLIC1-206ENST00000375779 NRXN1Q9ULB1 1477 aa21.76■■□□□ 1.07
CLIC1-206ENST00000375779 SOS2Q07890 1332 aaPredicted RBP21.76■■□□□ 1.07
CLIC1-206ENST00000375779 LRPPRCP42704 1394 aaKnown RBP21.75■■□□□ 1.07
CLIC1-206ENST00000375779 RAB3GAP2Q9H2M9 1393 aa21.75■■□□□ 1.07
CLIC1-206ENST00000375779 ORAI2Q96SN7 254 aa21.74■■□□□ 1.07
CLIC1-206ENST00000375779 DDX17Q92841 729 aaKnown RBP21.73■■□□□ 1.07
CLIC1-206ENST00000375779 ZNF772Q68DY9 489 aaPredicted RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms